Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TRBV25-1A0A075B6N4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV25-1A0A075B6N4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV25-1A0A075B6N4 DYNLL1-208ENST00000550178 581 ntBASIC19.02■□□□□ 0.64
TRBV25-1A0A075B6N4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV25-1A0A075B6N4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.02■□□□□ 0.63
TRBV25-1A0A075B6N4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV25-1A0A075B6N4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV25-1A0A075B6N4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV25-1A0A075B6N4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV25-1A0A075B6N4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV25-1A0A075B6N4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV25-1A0A075B6N4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19■□□□□ 0.63
TRBV25-1A0A075B6N4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV25-1A0A075B6N4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV25-1A0A075B6N4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV25-1A0A075B6N4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV25-1A0A075B6N4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRBV25-1A0A075B6N4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV25-1A0A075B6N4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV25-1A0A075B6N4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV25-1A0A075B6N4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV25-1A0A075B6N4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV25-1A0A075B6N4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV25-1A0A075B6N4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV25-1A0A075B6N4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV25-1A0A075B6N4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
TRBV25-1A0A075B6N4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV25-1A0A075B6N4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV25-1A0A075B6N4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV25-1A0A075B6N4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV25-1A0A075B6N4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV25-1A0A075B6N4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV25-1A0A075B6N4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV25-1A0A075B6N4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV25-1A0A075B6N4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV25-1A0A075B6N4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV25-1A0A075B6N4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV25-1A0A075B6N4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRBV25-1A0A075B6N4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV25-1A0A075B6N4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV25-1A0A075B6N4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV25-1A0A075B6N4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV25-1A0A075B6N4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRBV25-1A0A075B6N4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV25-1A0A075B6N4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV25-1A0A075B6N4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV25-1A0A075B6N4 AP002365.1-201ENST00000603448 772 ntBASIC18.88■□□□□ 0.61
TRBV25-1A0A075B6N4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV25-1A0A075B6N4 AL031258.1-201ENST00000623562 325 ntBASIC18.87■□□□□ 0.61
TRBV25-1A0A075B6N4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV25-1A0A075B6N4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV25-1A0A075B6N4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV25-1A0A075B6N4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV25-1A0A075B6N4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRBV25-1A0A075B6N4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRBV25-1A0A075B6N4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV25-1A0A075B6N4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.83■□□□□ 0.61
TRBV25-1A0A075B6N4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.83■□□□□ 0.61
TRBV25-1A0A075B6N4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV25-1A0A075B6N4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRBV25-1A0A075B6N4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV25-1A0A075B6N4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV25-1A0A075B6N4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRBV25-1A0A075B6N4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV25-1A0A075B6N4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV25-1A0A075B6N4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV25-1A0A075B6N4 AC142086.6-201ENST00000621154 1765 ntBASIC18.82■□□□□ 0.6
TRBV25-1A0A075B6N4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV25-1A0A075B6N4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV25-1A0A075B6N4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV25-1A0A075B6N4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV25-1A0A075B6N4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV25-1A0A075B6N4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV25-1A0A075B6N4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV25-1A0A075B6N4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV25-1A0A075B6N4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TRBV25-1A0A075B6N4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV25-1A0A075B6N4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV25-1A0A075B6N4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV25-1A0A075B6N4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV25-1A0A075B6N4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TRBV25-1A0A075B6N4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV25-1A0A075B6N4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV25-1A0A075B6N4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV25-1A0A075B6N4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV25-1A0A075B6N4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.78■□□□□ 0.6
TRBV25-1A0A075B6N4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV25-1A0A075B6N4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV25-1A0A075B6N4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV25-1A0A075B6N4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV25-1A0A075B6N4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV25-1A0A075B6N4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.75■□□□□ 0.59
TRBV25-1A0A075B6N4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV25-1A0A075B6N4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV25-1A0A075B6N4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV25-1A0A075B6N4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV25-1A0A075B6N4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV25-1A0A075B6N4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV25-1A0A075B6N4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 640 ms