Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 AC123595.1-201ENST00000440769 1046 ntBASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
DTX4Q9Y2E6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 CCDC92B-201ENST00000575506 885 ntBASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 LINC02228-203ENST00000641970 1355 ntBASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DTX4Q9Y2E6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 AC026271.2-201ENST00000428091 497 ntBASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 RARRES2P6-201ENST00000567333 442 ntBASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 TERF1P2-201ENST00000583350 1212 ntBASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 AC087623.3-201ENST00000607047 1098 ntBASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DTX4Q9Y2E6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 AC097381.1-201ENST00000429019 1296 ntBASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
DTX4Q9Y2E6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 MIR6821-201ENST00000617625 74 ntBASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DTX4Q9Y2E6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DTX4Q9Y2E6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms