RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 NISCHQ9Y2I1 1504 aa45.28■■■■■ 4.84
CCDC38-201ENST00000344280 CCDC180Q9P1Z9 1646 aa38.59■■■■□ 3.77
CCDC38-201ENST00000344280 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
CCDC38-201ENST00000344280 ZCCHC6Q5VYS8 1495 aaKnown RBP38.26■■■■□ 3.72
CCDC38-201ENST00000344280 DCAF8L2P0C7V8 631 aa37.56■■■■□ 3.6
CCDC38-201ENST00000344280 SUPT5HO00267 1087 aaKnown RBP37.52■■■■□ 3.6
CCDC38-201ENST00000344280 DCAF1Q9Y4B6 1507 aa37.14■■■■□ 3.54
CCDC38-201ENST00000344280 CHIC1Q5VXU3 224 aa36.39■■■■□ 3.42
CCDC38-201ENST00000344280 MYO15BQ96JP2 1530 aa36.22■■■■□ 3.39
CCDC38-201ENST00000344280 SCRIBQ14160 1630 aa36.15■■■■□ 3.38
CCDC38-201ENST00000344280 ABCC9O60706 1549 aa36.04■■■■□ 3.36
CCDC38-201ENST00000344280 RSF1Q96T23 1441 aaPredicted RBP35.75■■■■□ 3.31
CCDC38-201ENST00000344280 NACADO15069 1562 aa35.74■■■■□ 3.31
CCDC38-201ENST00000344280 CECR2Q9BXF3 1484 aa35.37■■■■□ 3.25
CCDC38-201ENST00000344280 RB1CC1Q8TDY2 1594 aa35.33■■■■□ 3.25
CCDC38-201ENST00000344280 LOC105371045A0A1W2PR82 267 aa35.31■■■■□ 3.24
CCDC38-201ENST00000344280 MROH2BQ7Z745 1585 aa35.21■■■■□ 3.23
CCDC38-201ENST00000344280 WIZO95785 1651 aa35■■■■□ 3.19
CCDC38-201ENST00000344280 PCGF6Q9BYE7 350 aa34.97■■■■□ 3.19
CCDC38-201ENST00000344280 TRIM41Q8WV44 630 aa34.95■■■■□ 3.19
CCDC38-201ENST00000344280 HRCP23327 699 aa34.78■■■■□ 3.16
CCDC38-201ENST00000344280 BAZ1AQ9NRL2 1556 aaPredicted RBP34.77■■■■□ 3.16
CCDC38-201ENST00000344280 UNC13AQ9UPW8 1703 aa34.73■■■■□ 3.15
CCDC38-201ENST00000344280 FAM9AQ8IZU1 332 aaPredicted RBP34.67■■■■□ 3.14
CCDC38-201ENST00000344280 SMARCA4P51532 1647 aa34.54■■■■□ 3.12
CCDC38-201ENST00000344280 EIF4G1Q04637 1599 aaKnown RBP34.44■■■■□ 3.1
CCDC38-201ENST00000344280 TOP2AP11388 1531 aaKnown RBP34.43■■■■□ 3.1
CCDC38-201ENST00000344280 EHMT2Q96KQ7 1210 aa34.39■■■■□ 3.1
CCDC38-201ENST00000344280 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
CCDC38-201ENST00000344280 TRIM26Q12899 539 aaPredicted RBP34.34■■■■□ 3.09
CCDC38-201ENST00000344280 BICRAQ9NZM4 1560 aa34.32■■■■□ 3.08
CCDC38-201ENST00000344280 CCDC88BA6NC98 1476 aa34.29■■■■□ 3.08
CCDC38-201ENST00000344280 SMARCA2P51531 1590 aa34.25■■■■□ 3.07
CCDC38-201ENST00000344280 PPARGC1BQ86YN6 1023 aaKnown RBP34.15■■■■□ 3.06
CCDC38-201ENST00000344280 ABCC8Q09428 1581 aa34.13■■■■□ 3.05
CCDC38-201ENST00000344280 PEG3Q9GZU2 1588 aa33.9■■■■□ 3.02
CCDC38-201ENST00000344280 SOGA1O94964 1423 aa33.77■■■■□ 3
CCDC38-201ENST00000344280 ATAD2BQ9ULI0 1458 aa33.72■■■□□ 2.99
CCDC38-201ENST00000344280 RUSC2Q8N2Y8 1516 aa33.62■■■□□ 2.97
CCDC38-201ENST00000344280 BAZ1BQ9UIG0 1483 aaKnown RBP33.59■■■□□ 2.97
CCDC38-201ENST00000344280 WRNQ14191 1432 aaPredicted RBP eCLIP33.56■■■□□ 2.96
CCDC38-201ENST00000344280 CSRNP3Q8WYN3 585 aa33.5■■■□□ 2.95
CCDC38-201ENST00000344280 EEA1Q15075 1411 aa33.47■■■□□ 2.95
CCDC38-201ENST00000344280 CEP162Q5TB80 1403 aa33.45■■■□□ 2.95
CCDC38-201ENST00000344280 SYNJ1O43426 1573 aa33.44■■■□□ 2.94
CCDC38-201ENST00000344280 TNIKQ9UKE5 1360 aa33.41■■■□□ 2.94
CCDC38-201ENST00000344280 ZEB1P37275 1124 aaPredicted RBP33.4■■■□□ 2.94
CCDC38-201ENST00000344280 UBTFP17480 764 aaKnown RBP33.32■■■□□ 2.93
CCDC38-201ENST00000344280 GOLGA3Q08378 1498 aa33.26■■■□□ 2.91
CCDC38-201ENST00000344280 TTBK1Q5TCY1 1321 aaPredicted RBP33.21■■■□□ 2.91
CCDC38-201ENST00000344280 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
CCDC38-201ENST00000344280 CEP164Q9UPV0 1460 aa33.09■■■□□ 2.89
CCDC38-201ENST00000344280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.07■■■□□ 2.88
CCDC38-201ENST00000344280 KIF21BO75037 1637 aa33.06■■■□□ 2.88
CCDC38-201ENST00000344280 HMGXB3Q12766 1538 aa33.06■■■□□ 2.88
CCDC38-201ENST00000344280 TOP2BQ02880 1626 aa33.03■■■□□ 2.88
CCDC38-201ENST00000344280 RAPGEF2Q9Y4G8 1499 aa32.95■■■□□ 2.86
CCDC38-201ENST00000344280 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
CCDC38-201ENST00000344280 CCER1Q8TC90 406 aaPredicted RBP32.9■■■□□ 2.86
CCDC38-201ENST00000344280 CLIP1P30622 1438 aa32.88■■■□□ 2.85
CCDC38-201ENST00000344280 CUX1P39880 1505 aa32.79■■■□□ 2.84
CCDC38-201ENST00000344280 CFTRP13569 1480 aa32.77■■■□□ 2.84
CCDC38-201ENST00000344280 RANGAP1P46060 587 aaPredicted RBP32.75■■■□□ 2.83
CCDC38-201ENST00000344280 VPS8Q8N3P4 1428 aa32.7■■■□□ 2.83
CCDC38-201ENST00000344280 PRXQ9BXM0 1461 aa32.65■■■□□ 2.82
CCDC38-201ENST00000344280 ERICH3Q5RHP9 1530 aa32.58■■■□□ 2.81
CCDC38-201ENST00000344280 KIF27Q86VH2 1401 aa32.53■■■□□ 2.8
CCDC38-201ENST00000344280 APLP2Q06481 763 aa32.47■■■□□ 2.79
CCDC38-201ENST00000344280 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
CCDC38-201ENST00000344280 HNRNPUL2Q1KMD3 747 aaKnown RBP32.44■■■□□ 2.78
CCDC38-201ENST00000344280 CADPSQ9ULU8 1353 aa32.44■■■□□ 2.78
CCDC38-201ENST00000344280 ARAP1Q96P48 1450 aa32.41■■■□□ 2.78
CCDC38-201ENST00000344280 CC2D2AQ9P2K1 1620 aa32.4■■■□□ 2.78
CCDC38-201ENST00000344280 CUX2O14529 1486 aa32.29■■■□□ 2.76
CCDC38-201ENST00000344280 IGF1RP08069 1367 aa32.24■■■□□ 2.75
CCDC38-201ENST00000344280 FGD5Q6ZNL6 1462 aa32.23■■■□□ 2.75
CCDC38-201ENST00000344280 KANK4Q5T7N3 995 aaPredicted RBP32.22■■■□□ 2.75
CCDC38-201ENST00000344280 ARHGAP35Q9NRY4 1499 aa32.19■■■□□ 2.74
CCDC38-201ENST00000344280 FANCD2Q9BXW9 1451 aa32.13■■■□□ 2.73
CCDC38-201ENST00000344280 DIEXFQ68CQ4 756 aaKnown RBP32.11■■■□□ 2.73
CCDC38-201ENST00000344280 CARMIL1Q5VZK9 1371 aa32.07■■■□□ 2.73
CCDC38-201ENST00000344280 NESP48681 1621 aa32.03■■■□□ 2.72
CCDC38-201ENST00000344280 RAD54L2Q9Y4B4 1467 aa31.96■■■□□ 2.71
CCDC38-201ENST00000344280 ZNF316A6NFI3 1004 aaPredicted RBP31.95■■■□□ 2.71
CCDC38-201ENST00000344280 DNMBPQ6XZF7 1577 aa31.93■■■□□ 2.7
CCDC38-201ENST00000344280 RRBP1Q9P2E9 1410 aaKnown RBP31.91■■■□□ 2.7
CCDC38-201ENST00000344280 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
CCDC38-201ENST00000344280 POLA1P09884 1462 aaPredicted RBP31.89■■■□□ 2.7
CCDC38-201ENST00000344280 SCAF1Q9H7N4 1312 aaKnown RBP31.88■■■□□ 2.69
CCDC38-201ENST00000344280 ABCA10Q8WWZ4 1543 aa31.84■■■□□ 2.69
CCDC38-201ENST00000344280 DHX57Q6P158 1386 aaKnown RBP31.8■■■□□ 2.68
CCDC38-201ENST00000344280 CCNB3Q8WWL7 1395 aa31.79■■■□□ 2.68
CCDC38-201ENST00000344280 TIAM1Q13009 1591 aa31.76■■■□□ 2.67
CCDC38-201ENST00000344280 P3H3Q8IVL6 736 aa31.75■■■□□ 2.67
CCDC38-201ENST00000344280 DNAJC5BQ9UF47 199 aa31.75■■■□□ 2.67
CCDC38-201ENST00000344280 URB2Q14146 1524 aaKnown RBP31.71■■■□□ 2.67
CCDC38-201ENST00000344280 ITGAEP38570 1179 aa31.69■■■□□ 2.66
CCDC38-201ENST00000344280 LAMC3Q9Y6N6 1575 aa31.69■■■□□ 2.66
CCDC38-201ENST00000344280 MAP3K1Q13233 1512 aa31.69■■■□□ 2.66
CCDC38-201ENST00000344280 NEUROD1Q13562 356 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms