RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 NISCHQ9Y2I1 1504 aa47.87■■■■■ 5.25
SPHK1-202ENST00000392496 CCDC180Q9P1Z9 1646 aa41.66■■■■■ 4.26
SPHK1-202ENST00000392496 ZCCHC6Q5VYS8 1495 aaKnown RBP40.27■■■■■ 4.04
SPHK1-202ENST00000392496 ABCC9O60706 1549 aa39.74■■■■□ 3.95
SPHK1-202ENST00000392496 DCAF1Q9Y4B6 1507 aa39.62■■■■□ 3.93
SPHK1-202ENST00000392496 DCAF8L2P0C7V8 631 aa39.37■■■■□ 3.89
SPHK1-202ENST00000392496 SHROOM4Q9ULL8 1493 aa39.14■■■■□ 3.86
SPHK1-202ENST00000392496 MYO15BQ96JP2 1530 aa39.07■■■■□ 3.84
SPHK1-202ENST00000392496 NACADO15069 1562 aa38.73■■■■□ 3.79
SPHK1-202ENST00000392496 RB1CC1Q8TDY2 1594 aa38.56■■■■□ 3.76
SPHK1-202ENST00000392496 SCRIBQ14160 1630 aa38.29■■■■□ 3.72
SPHK1-202ENST00000392496 SUPT5HO00267 1087 aaKnown RBP37.8■■■■□ 3.64
SPHK1-202ENST00000392496 UNC13AQ9UPW8 1703 aa37.57■■■■□ 3.61
SPHK1-202ENST00000392496 PABPN1Q86U42 306 aaKnown RBP eCLIP37.26■■■■□ 3.563e-7■■■□□ 17.7
SPHK1-202ENST00000392496 RSF1Q96T23 1441 aaPredicted RBP37.22■■■■□ 3.55
SPHK1-202ENST00000392496 BICRAQ9NZM4 1560 aa37.19■■■■□ 3.54
SPHK1-202ENST00000392496 CECR2Q9BXF3 1484 aa37.15■■■■□ 3.54
SPHK1-202ENST00000392496 MROH2BQ7Z745 1585 aa36.98■■■■□ 3.51
SPHK1-202ENST00000392496 BAZ1AQ9NRL2 1556 aaPredicted RBP36.95■■■■□ 3.51
SPHK1-202ENST00000392496 SMARCA4P51532 1647 aa36.75■■■■□ 3.47
SPHK1-202ENST00000392496 WIZO95785 1651 aa36.69■■■■□ 3.46
SPHK1-202ENST00000392496 CHIC1Q5VXU3 224 aa36.35■■■■□ 3.41
SPHK1-202ENST00000392496 TOP2AP11388 1531 aaKnown RBP36.34■■■■□ 3.41
SPHK1-202ENST00000392496 PEG3Q9GZU2 1588 aa36.31■■■■□ 3.4
SPHK1-202ENST00000392496 EIF4G1Q04637 1599 aaKnown RBP36.26■■■■□ 3.4
SPHK1-202ENST00000392496 SMARCA2P51531 1590 aa36.08■■■■□ 3.37
SPHK1-202ENST00000392496 ATAD2BQ9ULI0 1458 aa36.08■■■■□ 3.37
SPHK1-202ENST00000392496 CC2D2AQ9P2K1 1620 aa35.95■■■■□ 3.35
SPHK1-202ENST00000392496 CCDC88BA6NC98 1476 aa35.95■■■■□ 3.35
SPHK1-202ENST00000392496 BAZ1BQ9UIG0 1483 aaKnown RBP35.88■■■■□ 3.33
SPHK1-202ENST00000392496 DNAJC5BQ9UF47 199 aa35.79■■■■□ 3.32
SPHK1-202ENST00000392496 NCAPD3P42695 1498 aa35.74■■■■□ 3.31
SPHK1-202ENST00000392496 HMGXB3Q12766 1538 aa35.72■■■■□ 3.31
SPHK1-202ENST00000392496 TRIM41Q8WV44 630 aa35.55■■■■□ 3.28
SPHK1-202ENST00000392496 ABCC8Q09428 1581 aa35.26■■■■□ 3.23
SPHK1-202ENST00000392496 WRNQ14191 1432 aaPredicted RBP eCLIP35.03■■■■□ 3.2
SPHK1-202ENST00000392496 CFTRP13569 1480 aa35.01■■■■□ 3.19
SPHK1-202ENST00000392496 LOC105371045A0A1W2PR82 267 aa34.93■■■■□ 3.18
SPHK1-202ENST00000392496 PRDM2Q13029 1718 aa34.88■■■■□ 3.17
SPHK1-202ENST00000392496 FAM9AQ8IZU1 332 aaPredicted RBP34.87■■■■□ 3.17
SPHK1-202ENST00000392496 SYNJ1O43426 1573 aa34.87■■■■□ 3.17
SPHK1-202ENST00000392496 CADPSQ9ULU8 1353 aa34.83■■■■□ 3.17
SPHK1-202ENST00000392496 TOP2BQ02880 1626 aa34.73■■■■□ 3.15
SPHK1-202ENST00000392496 BIVM-ERCC5R4GMW8 1640 aa34.71■■■■□ 3.15
SPHK1-202ENST00000392496 EEA1Q15075 1411 aa34.69■■■■□ 3.14
SPHK1-202ENST00000392496 SOGA1O94964 1423 aa34.65■■■■□ 3.14
SPHK1-202ENST00000392496 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
SPHK1-202ENST00000392496 CUX1P39880 1505 aa34.56■■■■□ 3.12
SPHK1-202ENST00000392496 RUSC2Q8N2Y8 1516 aa34.5■■■■□ 3.11
SPHK1-202ENST00000392496 NESP48681 1621 aa34.5■■■■□ 3.11
SPHK1-202ENST00000392496 CSRNP3Q8WYN3 585 aa34.44■■■■□ 3.1
SPHK1-202ENST00000392496 PDS5BQ9NTI5 1447 aa34.44■■■■□ 3.1
SPHK1-202ENST00000392496 FANCD2Q9BXW9 1451 aa34.44■■■■□ 3.1
SPHK1-202ENST00000392496 ERCC6Q03468 1493 aa34.32■■■■□ 3.09
SPHK1-202ENST00000392496 EHMT2Q96KQ7 1210 aa34.32■■■■□ 3.08
SPHK1-202ENST00000392496 KIF21BO75037 1637 aa34.22■■■■□ 3.07
SPHK1-202ENST00000392496 GOLGA3Q08378 1498 aa34.21■■■■□ 3.07
SPHK1-202ENST00000392496 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.07
SPHK1-202ENST00000392496 DNMBPQ6XZF7 1577 aa34.2■■■■□ 3.06
SPHK1-202ENST00000392496 TNIKQ9UKE5 1360 aa34.15■■■■□ 3.06
SPHK1-202ENST00000392496 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
SPHK1-202ENST00000392496 KIF21AQ7Z4S6 1674 aa34.13■■■■□ 3.05
SPHK1-202ENST00000392496 KIF27Q86VH2 1401 aa34.13■■■■□ 3.05
SPHK1-202ENST00000392496 TOPBP1Q92547 1522 aa34.1■■■■□ 3.05
SPHK1-202ENST00000392496 UBTFP17480 764 aaKnown RBP34■■■■□ 3.03
SPHK1-202ENST00000392496 URB2Q14146 1524 aaKnown RBP34■■■■□ 3.03
SPHK1-202ENST00000392496 CUX2O14529 1486 aa33.97■■■■□ 3.03
SPHK1-202ENST00000392496 PRXQ9BXM0 1461 aa33.96■■■■□ 3.03
SPHK1-202ENST00000392496 MRC2Q9UBG0 1479 aa33.96■■■■□ 3.03
SPHK1-202ENST00000392496 CEP162Q5TB80 1403 aa33.95■■■■□ 3.03
SPHK1-202ENST00000392496 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.03
SPHK1-202ENST00000392496 ERICH3Q5RHP9 1530 aa33.95■■■■□ 3.03
SPHK1-202ENST00000392496 RAPGEF2Q9Y4G8 1499 aa33.94■■■■□ 3.02
SPHK1-202ENST00000392496 ABCA10Q8WWZ4 1543 aa33.87■■■■□ 3.01
SPHK1-202ENST00000392496 THOC2Q8NI27 1593 aaKnown RBP33.84■■■■□ 3.01
SPHK1-202ENST00000392496 RAD54L2Q9Y4B4 1467 aa33.82■■■■□ 3
SPHK1-202ENST00000392496 IGF1RP08069 1367 aa33.79■■■■□ 3
SPHK1-202ENST00000392496 WDR62O43379 1518 aa33.78■■■■□ 3
SPHK1-202ENST00000392496 WDR97A6NE52 1622 aa33.75■■■□□ 2.99
SPHK1-202ENST00000392496 CLIP1P30622 1438 aa33.65■■■□□ 2.98
SPHK1-202ENST00000392496 CARMIL1Q5VZK9 1371 aa33.63■■■□□ 2.97
SPHK1-202ENST00000392496 TRIM26Q12899 539 aaPredicted RBP33.59■■■□□ 2.97
SPHK1-202ENST00000392496 PCGF6Q9BYE7 350 aa33.59■■■□□ 2.97
SPHK1-202ENST00000392496 TARBP1Q13395 1621 aaKnown RBP33.58■■■□□ 2.97
SPHK1-202ENST00000392496 ABCA5Q8WWZ7 1642 aa33.57■■■□□ 2.97
SPHK1-202ENST00000392496 CUL7Q14999 1698 aa33.54■■■□□ 2.96
SPHK1-202ENST00000392496 GAPVD1Q14C86 1478 aa33.48■■■□□ 2.95
SPHK1-202ENST00000392496 TDRD9Q8NDG6 1382 aaKnown RBP33.46■■■□□ 2.95
SPHK1-202ENST00000392496 IFT140Q96RY7 1462 aa33.43■■■□□ 2.94
SPHK1-202ENST00000392496 VPS8Q8N3P4 1428 aa33.4■■■□□ 2.94
SPHK1-202ENST00000392496 RANGAP1P46060 587 aaPredicted RBP33.31■■■□□ 2.92
SPHK1-202ENST00000392496 ARAP1Q96P48 1450 aa33.29■■■□□ 2.92
SPHK1-202ENST00000392496 PBRM1Q86U86 1689 aa33.29■■■□□ 2.92
SPHK1-202ENST00000392496 ARHGAP35Q9NRY4 1499 aa33.24■■■□□ 2.91
SPHK1-202ENST00000392496 PPARGC1BQ86YN6 1023 aaKnown RBP33.24■■■□□ 2.91
SPHK1-202ENST00000392496 AQRO60306 1485 aaKnown RBP eCLIP33.21■■■□□ 2.913e-17■■■■■ 62.1
SPHK1-202ENST00000392496 CTTNBP2Q8WZ74 1663 aa33.2■■■□□ 2.91
SPHK1-202ENST00000392496 GRIN2BQ13224 1484 aa33.19■■■□□ 2.9
SPHK1-202ENST00000392496 ZNF608Q9ULD9 1512 aaPredicted RBP33.15■■■□□ 2.9
SPHK1-202ENST00000392496 FHAD1B1AJZ9 1412 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms