RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 NISCHQ9Y2I1 1504 aa52.2■■■■■ 5.95
SDHAP3-201ENST00000436493 CCDC180Q9P1Z9 1646 aa46.44■■■■■ 5.03
SDHAP3-201ENST00000436493 ABCC9O60706 1549 aa45.66■■■■■ 4.9
SDHAP3-201ENST00000436493 DCAF8L2P0C7V8 631 aa43.84■■■■■ 4.61
SDHAP3-201ENST00000436493 RB1CC1Q8TDY2 1594 aa43.84■■■■■ 4.61
SDHAP3-201ENST00000436493 NACADO15069 1562 aa43.75■■■■■ 4.59
SDHAP3-201ENST00000436493 ZCCHC6Q5VYS8 1495 aaKnown RBP43.42■■■■■ 4.54
SDHAP3-201ENST00000436493 MYO15BQ96JP2 1530 aa43.4■■■■■ 4.54
SDHAP3-201ENST00000436493 DCAF1Q9Y4B6 1507 aa43.16■■■■■ 4.5
SDHAP3-201ENST00000436493 UNC13AQ9UPW8 1703 aa42.76■■■■■ 4.44
SDHAP3-201ENST00000436493 PABPN1Q86U42 306 aaKnown RBP eCLIP42.68■■■■■ 4.42
SDHAP3-201ENST00000436493 BICRAQ9NZM4 1560 aa42.45■■■■■ 4.39
SDHAP3-201ENST00000436493 SCRIBQ14160 1630 aa42.39■■■■■ 4.38
SDHAP3-201ENST00000436493 DNAJC5BQ9UF47 199 aa42.03■■■■■ 4.32
SDHAP3-201ENST00000436493 SHROOM4Q9ULL8 1493 aa42.03■■■■■ 4.32
SDHAP3-201ENST00000436493 EIF4G1Q04637 1599 aaKnown RBP41.37■■■■■ 4.21
SDHAP3-201ENST00000436493 CC2D2AQ9P2K1 1620 aa41.26■■■■■ 4.19
SDHAP3-201ENST00000436493 CECR2Q9BXF3 1484 aa41.04■■■■■ 4.16
SDHAP3-201ENST00000436493 SMARCA4P51532 1647 aa40.52■■■■■ 4.08
SDHAP3-201ENST00000436493 BAZ1AQ9NRL2 1556 aaPredicted RBP40.48■■■■■ 4.07
SDHAP3-201ENST00000436493 NCAPD3P42695 1498 aa40.37■■■■■ 4.05
SDHAP3-201ENST00000436493 ATAD2BQ9ULI0 1458 aa40.36■■■■■ 4.05
SDHAP3-201ENST00000436493 SMARCA2P51531 1590 aa40.32■■■■■ 4.05
SDHAP3-201ENST00000436493 MROH2BQ7Z745 1585 aa40.22■■■■■ 4.03
SDHAP3-201ENST00000436493 HMGXB3Q12766 1538 aa40.12■■■■■ 4.01
SDHAP3-201ENST00000436493 PEG3Q9GZU2 1588 aa40.1■■■■■ 4.01
SDHAP3-201ENST00000436493 BAZ1BQ9UIG0 1483 aaKnown RBP40.05■■■■■ 4
SDHAP3-201ENST00000436493 WIZO95785 1651 aa39.77■■■■□ 3.96
SDHAP3-201ENST00000436493 RSF1Q96T23 1441 aaPredicted RBP39.73■■■■□ 3.95
SDHAP3-201ENST00000436493 NESP48681 1621 aa39.43■■■■□ 3.9
SDHAP3-201ENST00000436493 ERCC6Q03468 1493 aa39.41■■■■□ 3.9
SDHAP3-201ENST00000436493 TOP2AP11388 1531 aaKnown RBP39.35■■■■□ 3.89
SDHAP3-201ENST00000436493 LAMC3Q9Y6N6 1575 aa39.32■■■■□ 3.88
SDHAP3-201ENST00000436493 CADPSQ9ULU8 1353 aa39.21■■■■□ 3.87
SDHAP3-201ENST00000436493 PDS5BQ9NTI5 1447 aa39.12■■■■□ 3.85
SDHAP3-201ENST00000436493 CUX2O14529 1486 aa38.98■■■■□ 3.83
SDHAP3-201ENST00000436493 KIF21AQ7Z4S6 1674 aa38.94■■■■□ 3.82
SDHAP3-201ENST00000436493 CCDC88BA6NC98 1476 aa38.92■■■■□ 3.82
SDHAP3-201ENST00000436493 CFTRP13569 1480 aa38.92■■■■□ 3.82
SDHAP3-201ENST00000436493 THOC2Q8NI27 1593 aaKnown RBP38.82■■■■□ 3.81
SDHAP3-201ENST00000436493 FANCD2Q9BXW9 1451 aa38.75■■■■□ 3.79
SDHAP3-201ENST00000436493 SUPT5HO00267 1087 aaKnown RBP38.73■■■■□ 3.79
SDHAP3-201ENST00000436493 CEP164Q9UPV0 1460 aa38.73■■■■□ 3.79
SDHAP3-201ENST00000436493 MRC2Q9UBG0 1479 aa38.69■■■■□ 3.78
SDHAP3-201ENST00000436493 PRDM2Q13029 1718 aa38.56■■■■□ 3.76
SDHAP3-201ENST00000436493 WDR62O43379 1518 aa38.52■■■■□ 3.76
SDHAP3-201ENST00000436493 URB2Q14146 1524 aaKnown RBP38.34■■■■□ 3.73
SDHAP3-201ENST00000436493 ABCC8Q09428 1581 aa38.13■■■■□ 3.69
SDHAP3-201ENST00000436493 TOPBP1Q92547 1522 aa38.1■■■■□ 3.69
SDHAP3-201ENST00000436493 DNMBPQ6XZF7 1577 aa38.04■■■■□ 3.68
SDHAP3-201ENST00000436493 DNAJC5Q9H3Z4 198 aa38.02■■■■□ 3.68
SDHAP3-201ENST00000436493 IFT140Q96RY7 1462 aa37.92■■■■□ 3.66
SDHAP3-201ENST00000436493 POLA1P09884 1462 aaPredicted RBP37.76■■■■□ 3.63
SDHAP3-201ENST00000436493 CUX1P39880 1505 aa37.74■■■■□ 3.63
SDHAP3-201ENST00000436493 ZNF608Q9ULD9 1512 aaPredicted RBP37.73■■■■□ 3.63
SDHAP3-201ENST00000436493 FGD5Q6ZNL6 1462 aa37.66■■■■□ 3.62
SDHAP3-201ENST00000436493 SOGA1O94964 1423 aa37.66■■■■□ 3.62
SDHAP3-201ENST00000436493 TARBP1Q13395 1621 aaKnown RBP37.65■■■■□ 3.62
SDHAP3-201ENST00000436493 RAD54L2Q9Y4B4 1467 aa37.62■■■■□ 3.61
SDHAP3-201ENST00000436493 EIF4G3O43432 1585 aaKnown RBP37.55■■■■□ 3.6
SDHAP3-201ENST00000436493 AQRO60306 1485 aaKnown RBP eCLIP37.53■■■■□ 3.6
SDHAP3-201ENST00000436493 WRNQ14191 1432 aaPredicted RBP eCLIP37.49■■■■□ 3.59
SDHAP3-201ENST00000436493 TDRD9Q8NDG6 1382 aaKnown RBP37.46■■■■□ 3.59
SDHAP3-201ENST00000436493 OSCARQ8IYS5 282 aa37.44■■■■□ 3.58
SDHAP3-201ENST00000436493 TOP2BQ02880 1626 aa37.38■■■■□ 3.57
SDHAP3-201ENST00000436493 WDR97A6NE52 1622 aa37.37■■■■□ 3.57
SDHAP3-201ENST00000436493 BIVM-ERCC5R4GMW8 1640 aa37.36■■■■□ 3.57
SDHAP3-201ENST00000436493 SYNJ1O43426 1573 aa37.34■■■■□ 3.57
SDHAP3-201ENST00000436493 ABCA10Q8WWZ4 1543 aa37.27■■■■□ 3.56
SDHAP3-201ENST00000436493 GRIN2BQ13224 1484 aa37.22■■■■□ 3.55
SDHAP3-201ENST00000436493 FBLN2P98095 1184 aa37.22■■■■□ 3.55
SDHAP3-201ENST00000436493 GAPVD1Q14C86 1478 aa37.2■■■■□ 3.55
SDHAP3-201ENST00000436493 SNAPC4Q5SXM2 1469 aa37.17■■■■□ 3.54
SDHAP3-201ENST00000436493 MAGI1Q96QZ7 1491 aaPredicted RBP37.12■■■■□ 3.53
SDHAP3-201ENST00000436493 CHD1O14646 1710 aa37.11■■■■□ 3.53
SDHAP3-201ENST00000436493 ABCA5Q8WWZ7 1642 aa37.1■■■■□ 3.53
SDHAP3-201ENST00000436493 PBRM1Q86U86 1689 aa37.07■■■■□ 3.52
SDHAP3-201ENST00000436493 CHMP7Q8WUX9 453 aaPredicted RBP37.07■■■■□ 3.52
SDHAP3-201ENST00000436493 SYNJ2O15056 1496 aa36.98■■■■□ 3.51
SDHAP3-201ENST00000436493 ERICH3Q5RHP9 1530 aa36.83■■■■□ 3.49
SDHAP3-201ENST00000436493 FHAD1B1AJZ9 1412 aa36.77■■■■□ 3.48
SDHAP3-201ENST00000436493 TRIM41Q8WV44 630 aa36.77■■■■□ 3.48
SDHAP3-201ENST00000436493 ADAMTS12P58397 1594 aa36.77■■■■□ 3.48
SDHAP3-201ENST00000436493 KIF27Q86VH2 1401 aa36.75■■■■□ 3.47
SDHAP3-201ENST00000436493 RIMBP3CA6NJZ7 1639 aa36.74■■■■□ 3.47
SDHAP3-201ENST00000436493 RIMBP3BA6NNM3 1639 aa36.74■■■■□ 3.47
SDHAP3-201ENST00000436493 RIMBP3Q9UFD9 1639 aa36.74■■■■□ 3.47
SDHAP3-201ENST00000436493 ARHGEF11O15085 1522 aa36.74■■■■□ 3.47
SDHAP3-201ENST00000436493 GRIN2AQ12879 1464 aa36.71■■■■□ 3.47
SDHAP3-201ENST00000436493 CLASP1Q7Z460 1538 aa36.69■■■■□ 3.46
SDHAP3-201ENST00000436493 IGF1RP08069 1367 aa36.59■■■■□ 3.45
SDHAP3-201ENST00000436493 NUP160Q12769 1436 aa36.54■■■■□ 3.44
SDHAP3-201ENST00000436493 CEP170Q5SW79 1584 aa36.51■■■■□ 3.44
SDHAP3-201ENST00000436493 CYB5RLQ6IPT4 315 aa36.5■■■■□ 3.43
SDHAP3-201ENST00000436493 CUL7Q14999 1698 aa36.46■■■■□ 3.43
SDHAP3-201ENST00000436493 ARAP1Q96P48 1450 aa36.42■■■■□ 3.42
SDHAP3-201ENST00000436493 CARMIL1Q5VZK9 1371 aa36.4■■■■□ 3.42
SDHAP3-201ENST00000436493 RUSC2Q8N2Y8 1516 aa36.31■■■■□ 3.4
SDHAP3-201ENST00000436493 JPH4Q96JJ6 628 aa36.25■■■■□ 3.39
SDHAP3-201ENST00000436493 SHROOM2Q13796 1616 aa36.25■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms