RNA–Protein interactions for RNA: ENST00000383329.7

HLA-C-203, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS ALT2 BASIC

Gene HLA-C, Length 1,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-203ENST00000383329 NISCHQ9Y2I1 1504 aa49.23■■■■■ 5.47
HLA-C-203ENST00000383329 CCDC180Q9P1Z9 1646 aa43.83■■■■■ 4.61
HLA-C-203ENST00000383329 ABCC9O60706 1549 aa43.26■■■■■ 4.52
HLA-C-203ENST00000383329 RB1CC1Q8TDY2 1594 aa41.4■■■■■ 4.22
HLA-C-203ENST00000383329 DCAF8L2P0C7V8 631 aa41.33■■■■■ 4.21
HLA-C-203ENST00000383329 NACADO15069 1562 aa41.27■■■■■ 4.2
HLA-C-203ENST00000383329 ZCCHC6Q5VYS8 1495 aaKnown RBP41.05■■■■■ 4.16
HLA-C-203ENST00000383329 MYO15BQ96JP2 1530 aa40.9■■■■■ 4.14
HLA-C-203ENST00000383329 DCAF1Q9Y4B6 1507 aa40.65■■■■■ 4.1
HLA-C-203ENST00000383329 UNC13AQ9UPW8 1703 aa40.56■■■■■ 4.08
HLA-C-203ENST00000383329 PABPN1Q86U42 306 aaKnown RBP eCLIP40.41■■■■■ 4.06
HLA-C-203ENST00000383329 BICRAQ9NZM4 1560 aa40.23■■■■■ 4.03
HLA-C-203ENST00000383329 SCRIBQ14160 1630 aa40.07■■■■■ 4
HLA-C-203ENST00000383329 DNAJC5BQ9UF47 199 aa40.01■■■■■ 4
HLA-C-203ENST00000383329 SHROOM4Q9ULL8 1493 aa39.65■■■■□ 3.94
HLA-C-203ENST00000383329 EIF4G1Q04637 1599 aaKnown RBP39.16■■■■□ 3.86
HLA-C-203ENST00000383329 CC2D2AQ9P2K1 1620 aa39.09■■■■□ 3.85
HLA-C-203ENST00000383329 CECR2Q9BXF3 1484 aa38.85■■■■□ 3.81
HLA-C-203ENST00000383329 SMARCA4P51532 1647 aa38.26■■■■□ 3.72
HLA-C-203ENST00000383329 BAZ1AQ9NRL2 1556 aaPredicted RBP38.15■■■■□ 3.7
HLA-C-203ENST00000383329 ATAD2BQ9ULI0 1458 aa38.13■■■■□ 3.69
HLA-C-203ENST00000383329 NCAPD3P42695 1498 aa38.12■■■■□ 3.69
HLA-C-203ENST00000383329 SUPT5HO00267 1087 aaKnown RBP38.08■■■■□ 3.69
HLA-C-203ENST00000383329 SMARCA2P51531 1590 aa38.02■■■■□ 3.68
HLA-C-203ENST00000383329 MROH2BQ7Z745 1585 aa37.99■■■■□ 3.67
HLA-C-203ENST00000383329 RSF1Q96T23 1441 aaPredicted RBP37.91■■■■□ 3.66
HLA-C-203ENST00000383329 HMGXB3Q12766 1538 aa37.88■■■■□ 3.65
HLA-C-203ENST00000383329 PEG3Q9GZU2 1588 aa37.85■■■■□ 3.65
HLA-C-203ENST00000383329 BAZ1BQ9UIG0 1483 aaKnown RBP37.78■■■■□ 3.64
HLA-C-203ENST00000383329 WIZO95785 1651 aa37.58■■■■□ 3.61
HLA-C-203ENST00000383329 NESP48681 1621 aa37.38■■■■□ 3.57
HLA-C-203ENST00000383329 ERCC6Q03468 1493 aa37.26■■■■□ 3.55
HLA-C-203ENST00000383329 LAMC3Q9Y6N6 1575 aa37.14■■■■□ 3.54
HLA-C-203ENST00000383329 TOP2AP11388 1531 aaKnown RBP37.09■■■■□ 3.53
HLA-C-203ENST00000383329 CADPSQ9ULU8 1353 aa37.01■■■■□ 3.51
HLA-C-203ENST00000383329 CUX2O14529 1486 aa36.91■■■■□ 3.5
HLA-C-203ENST00000383329 KIF21AQ7Z4S6 1674 aa36.9■■■■□ 3.5
HLA-C-203ENST00000383329 PDS5BQ9NTI5 1447 aa36.9■■■■□ 3.5
HLA-C-203ENST00000383329 THOC2Q8NI27 1593 aaKnown RBP36.81■■■■□ 3.48
HLA-C-203ENST00000383329 CCDC88BA6NC98 1476 aa36.75■■■■□ 3.47
HLA-C-203ENST00000383329 CFTRP13569 1480 aa36.72■■■■□ 3.47
HLA-C-203ENST00000383329 FANCD2Q9BXW9 1451 aa36.6■■■■□ 3.45
HLA-C-203ENST00000383329 MRC2Q9UBG0 1479 aa36.56■■■■□ 3.44
HLA-C-203ENST00000383329 CEP164Q9UPV0 1460 aa36.56■■■■□ 3.44
HLA-C-203ENST00000383329 WDR62O43379 1518 aa36.44■■■■□ 3.42
HLA-C-203ENST00000383329 PRDM2Q13029 1718 aa36.42■■■■□ 3.42
HLA-C-203ENST00000383329 CHIC1Q5VXU3 224 aa36.32■■■■□ 3.41
HLA-C-203ENST00000383329 URB2Q14146 1524 aaKnown RBP36.27■■■■□ 3.4
HLA-C-203ENST00000383329 DNAJC5Q9H3Z4 198 aa36.15■■■■□ 3.38
HLA-C-203ENST00000383329 TOPBP1Q92547 1522 aa35.99■■■■□ 3.35
HLA-C-203ENST00000383329 TRIM41Q8WV44 630 aa35.9■■■■□ 3.34
HLA-C-203ENST00000383329 DNMBPQ6XZF7 1577 aa35.89■■■■□ 3.34
HLA-C-203ENST00000383329 ABCC8Q09428 1581 aa35.89■■■■□ 3.34
HLA-C-203ENST00000383329 IFT140Q96RY7 1462 aa35.78■■■■□ 3.32
HLA-C-203ENST00000383329 ZNF608Q9ULD9 1512 aaPredicted RBP35.73■■■■□ 3.31
HLA-C-203ENST00000383329 WRNQ14191 1432 aaPredicted RBP eCLIP35.69■■■■□ 3.3
HLA-C-203ENST00000383329 POLA1P09884 1462 aaPredicted RBP35.66■■■■□ 3.3
HLA-C-203ENST00000383329 CUX1P39880 1505 aa35.64■■■■□ 3.3
HLA-C-203ENST00000383329 TARBP1Q13395 1621 aaKnown RBP35.62■■■■□ 3.29
HLA-C-203ENST00000383329 RAD54L2Q9Y4B4 1467 aa35.56■■■■□ 3.28
HLA-C-203ENST00000383329 FGD5Q6ZNL6 1462 aa35.55■■■■□ 3.28
HLA-C-203ENST00000383329 EIF4G3O43432 1585 aaKnown RBP35.54■■■■□ 3.28
HLA-C-203ENST00000383329 SOGA1O94964 1423 aa35.51■■■■□ 3.28
HLA-C-203ENST00000383329 AQRO60306 1485 aaKnown RBP eCLIP35.49■■■■□ 3.276e-7■■■■■ 27.8
HLA-C-203ENST00000383329 SYNJ1O43426 1573 aa35.44■■■■□ 3.26
HLA-C-203ENST00000383329 TOP2BQ02880 1626 aa35.39■■■■□ 3.26
HLA-C-203ENST00000383329 TDRD9Q8NDG6 1382 aaKnown RBP35.39■■■■□ 3.26
HLA-C-203ENST00000383329 OSCARQ8IYS5 282 aa35.38■■■■□ 3.25
HLA-C-203ENST00000383329 BIVM-ERCC5R4GMW8 1640 aa35.33■■■■□ 3.25
HLA-C-203ENST00000383329 WDR97A6NE52 1622 aa35.25■■■■□ 3.23
HLA-C-203ENST00000383329 CHD1O14646 1710 aa35.16■■■■□ 3.22
HLA-C-203ENST00000383329 ABCA10Q8WWZ4 1543 aa35.16■■■■□ 3.22
HLA-C-203ENST00000383329 FAM9AQ8IZU1 332 aaPredicted RBP35.14■■■■□ 3.22
HLA-C-203ENST00000383329 SNAPC4Q5SXM2 1469 aa35.13■■■■□ 3.21
HLA-C-203ENST00000383329 FBLN2P98095 1184 aa35.13■■■■□ 3.21
HLA-C-203ENST00000383329 GRIN2BQ13224 1484 aa35.1■■■■□ 3.21
HLA-C-203ENST00000383329 GAPVD1Q14C86 1478 aa35.09■■■■□ 3.21
HLA-C-203ENST00000383329 EEA1Q15075 1411 aa35.06■■■■□ 3.2
HLA-C-203ENST00000383329 ABCA5Q8WWZ7 1642 aa35.05■■■■□ 3.2
HLA-C-203ENST00000383329 PBRM1Q86U86 1689 aa35.04■■■■□ 3.2
HLA-C-203ENST00000383329 MAGI1Q96QZ7 1491 aaPredicted RBP35.02■■■■□ 3.2
HLA-C-203ENST00000383329 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
HLA-C-203ENST00000383329 CSRNP3Q8WYN3 585 aa34.95■■■■□ 3.18
HLA-C-203ENST00000383329 CHMP7Q8WUX9 453 aaPredicted RBP34.94■■■■□ 3.18
HLA-C-203ENST00000383329 SYNJ2O15056 1496 aa34.9■■■■□ 3.18
HLA-C-203ENST00000383329 LOC105371045A0A1W2PR82 267 aa34.89■■■■□ 3.18
HLA-C-203ENST00000383329 RIMBP3CA6NJZ7 1639 aa34.87■■■■□ 3.17
HLA-C-203ENST00000383329 RIMBP3BA6NNM3 1639 aa34.87■■■■□ 3.17
HLA-C-203ENST00000383329 RIMBP3Q9UFD9 1639 aa34.87■■■■□ 3.17
HLA-C-203ENST00000383329 KIF27Q86VH2 1401 aa34.85■■■■□ 3.17
HLA-C-203ENST00000383329 ARHGEF11O15085 1522 aa34.82■■■■□ 3.16
HLA-C-203ENST00000383329 CLASP1Q7Z460 1538 aa34.75■■■■□ 3.15
HLA-C-203ENST00000383329 ADAMTS12P58397 1594 aa34.74■■■■□ 3.15
HLA-C-203ENST00000383329 ERICH3Q5RHP9 1530 aa34.71■■■■□ 3.15
HLA-C-203ENST00000383329 GRIN2AQ12879 1464 aa34.67■■■■□ 3.14
HLA-C-203ENST00000383329 FHAD1B1AJZ9 1412 aa34.65■■■■□ 3.14
HLA-C-203ENST00000383329 IGF1RP08069 1367 aa34.61■■■■□ 3.13
HLA-C-203ENST00000383329 EHMT2Q96KQ7 1210 aa34.57■■■■□ 3.13
HLA-C-203ENST00000383329 CYB5RLQ6IPT4 315 aa34.56■■■■□ 3.12
HLA-C-203ENST00000383329 ARAP1Q96P48 1450 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms