RNA–Protein interactions for RNA: ENST00000409751.1

RAB1A-202, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB1A, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-202ENST00000409751 NISCHQ9Y2I1 1504 aa51.1■■■■■ 5.77
RAB1A-202ENST00000409751 CCDC180Q9P1Z9 1646 aa45.35■■■■■ 4.85
RAB1A-202ENST00000409751 ABCC9O60706 1549 aa44.02■■■■■ 4.64
RAB1A-202ENST00000409751 DCAF8L2P0C7V8 631 aa42.69■■■■■ 4.42
RAB1A-202ENST00000409751 ZCCHC6Q5VYS8 1495 aaKnown RBP42.65■■■■■ 4.42
RAB1A-202ENST00000409751 RB1CC1Q8TDY2 1594 aa42.49■■■■■ 4.39
RAB1A-202ENST00000409751 NACADO15069 1562 aa42.47■■■■■ 4.39
RAB1A-202ENST00000409751 MYO15BQ96JP2 1530 aa42.23■■■■■ 4.35
RAB1A-202ENST00000409751 DCAF1Q9Y4B6 1507 aa42.23■■■■■ 4.35
RAB1A-202ENST00000409751 UNC13AQ9UPW8 1703 aa41.64■■■■■ 4.26
RAB1A-202ENST00000409751 SCRIBQ14160 1630 aa41.5■■■■■ 4.23
RAB1A-202ENST00000409751 PABPN1Q86U42 306 aaKnown RBP eCLIP41.18■■■■■ 4.18
RAB1A-202ENST00000409751 BICRAQ9NZM4 1560 aa41.15■■■■■ 4.18
RAB1A-202ENST00000409751 SHROOM4Q9ULL8 1493 aa40.76■■■■■ 4.12
RAB1A-202ENST00000409751 EIF4G1Q04637 1599 aaKnown RBP40.06■■■■■ 4
RAB1A-202ENST00000409751 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
RAB1A-202ENST00000409751 CC2D2AQ9P2K1 1620 aa39.83■■■■□ 3.97
RAB1A-202ENST00000409751 CECR2Q9BXF3 1484 aa39.78■■■■□ 3.96
RAB1A-202ENST00000409751 SMARCA4P51532 1647 aa39.65■■■■□ 3.94
RAB1A-202ENST00000409751 BAZ1AQ9NRL2 1556 aaPredicted RBP39.63■■■■□ 3.93
RAB1A-202ENST00000409751 MROH2BQ7Z745 1585 aa39.42■■■■□ 3.9
RAB1A-202ENST00000409751 SMARCA2P51531 1590 aa39.26■■■■□ 3.88
RAB1A-202ENST00000409751 ATAD2BQ9ULI0 1458 aa39.24■■■■□ 3.87
RAB1A-202ENST00000409751 PEG3Q9GZU2 1588 aa39.15■■■■□ 3.86
RAB1A-202ENST00000409751 NCAPD3P42695 1498 aa39.11■■■■□ 3.85
RAB1A-202ENST00000409751 WIZO95785 1651 aa39.11■■■■□ 3.85
RAB1A-202ENST00000409751 RSF1Q96T23 1441 aaPredicted RBP39.05■■■■□ 3.84
RAB1A-202ENST00000409751 HMGXB3Q12766 1538 aa39.04■■■■□ 3.84
RAB1A-202ENST00000409751 BAZ1BQ9UIG0 1483 aaKnown RBP39.03■■■■□ 3.84
RAB1A-202ENST00000409751 TOP2AP11388 1531 aaKnown RBP38.65■■■■□ 3.78
RAB1A-202ENST00000409751 SUPT5HO00267 1087 aaKnown RBP38.49■■■■□ 3.75
RAB1A-202ENST00000409751 NESP48681 1621 aa38.2■■■■□ 3.71
RAB1A-202ENST00000409751 CCDC88BA6NC98 1476 aa38.16■■■■□ 3.7
RAB1A-202ENST00000409751 LAMC3Q9Y6N6 1575 aa38.13■■■■□ 3.69
RAB1A-202ENST00000409751 CADPSQ9ULU8 1353 aa38.03■■■■□ 3.68
RAB1A-202ENST00000409751 ERCC6Q03468 1493 aa37.95■■■■□ 3.67
RAB1A-202ENST00000409751 CFTRP13569 1480 aa37.88■■■■□ 3.65
RAB1A-202ENST00000409751 KIF21AQ7Z4S6 1674 aa37.85■■■■□ 3.65
RAB1A-202ENST00000409751 PRDM2Q13029 1718 aa37.84■■■■□ 3.65
RAB1A-202ENST00000409751 PDS5BQ9NTI5 1447 aa37.82■■■■□ 3.65
RAB1A-202ENST00000409751 FANCD2Q9BXW9 1451 aa37.66■■■■□ 3.62
RAB1A-202ENST00000409751 CEP164Q9UPV0 1460 aa37.61■■■■□ 3.61
RAB1A-202ENST00000409751 THOC2Q8NI27 1593 aaKnown RBP37.55■■■■□ 3.6
RAB1A-202ENST00000409751 MRC2Q9UBG0 1479 aa37.46■■■■□ 3.59
RAB1A-202ENST00000409751 WDR62O43379 1518 aa37.31■■■■□ 3.56
RAB1A-202ENST00000409751 CUX2O14529 1486 aa37.3■■■■□ 3.56
RAB1A-202ENST00000409751 URB2Q14146 1524 aaKnown RBP37.26■■■■□ 3.55
RAB1A-202ENST00000409751 DNMBPQ6XZF7 1577 aa37.12■■■■□ 3.53
RAB1A-202ENST00000409751 TOPBP1Q92547 1522 aa37.1■■■■□ 3.53
RAB1A-202ENST00000409751 ABCC8Q09428 1581 aa37.07■■■■□ 3.53
RAB1A-202ENST00000409751 CUX1P39880 1505 aa36.98■■■■□ 3.51
RAB1A-202ENST00000409751 WRNQ14191 1432 aaPredicted RBP eCLIP36.87■■■■□ 3.49
RAB1A-202ENST00000409751 SYNJ1O43426 1573 aa36.81■■■■□ 3.48
RAB1A-202ENST00000409751 POLA1P09884 1462 aaPredicted RBP36.81■■■■□ 3.48
RAB1A-202ENST00000409751 FGD5Q6ZNL6 1462 aa36.81■■■■□ 3.48
RAB1A-202ENST00000409751 BIVM-ERCC5R4GMW8 1640 aa36.79■■■■□ 3.48
RAB1A-202ENST00000409751 TOP2BQ02880 1626 aa36.77■■■■□ 3.48
RAB1A-202ENST00000409751 IFT140Q96RY7 1462 aa36.76■■■■□ 3.47
RAB1A-202ENST00000409751 RAD54L2Q9Y4B4 1467 aa36.67■■■■□ 3.46
RAB1A-202ENST00000409751 TARBP1Q13395 1621 aaKnown RBP36.67■■■■□ 3.46
RAB1A-202ENST00000409751 SOGA1O94964 1423 aa36.65■■■■□ 3.46
RAB1A-202ENST00000409751 ZNF608Q9ULD9 1512 aaPredicted RBP36.58■■■■□ 3.45
RAB1A-202ENST00000409751 WDR97A6NE52 1622 aa36.53■■■■□ 3.44
RAB1A-202ENST00000409751 EIF4G3O43432 1585 aaKnown RBP36.53■■■■□ 3.44
RAB1A-202ENST00000409751 AQRO60306 1485 aaKnown RBP eCLIP36.42■■■■□ 3.421e-7■■■□□ 16.7
RAB1A-202ENST00000409751 TDRD9Q8NDG6 1382 aaKnown RBP36.41■■■■□ 3.42
RAB1A-202ENST00000409751 ABCA10Q8WWZ4 1543 aa36.4■■■■□ 3.42
RAB1A-202ENST00000409751 PBRM1Q86U86 1689 aa36.3■■■■□ 3.4
RAB1A-202ENST00000409751 ABCA5Q8WWZ7 1642 aa36.29■■■■□ 3.4
RAB1A-202ENST00000409751 TRIM41Q8WV44 630 aa36.29■■■■□ 3.4
RAB1A-202ENST00000409751 GAPVD1Q14C86 1478 aa36.26■■■■□ 3.39
RAB1A-202ENST00000409751 GRIN2BQ13224 1484 aa36.18■■■■□ 3.38
RAB1A-202ENST00000409751 SNAPC4Q5SXM2 1469 aa36.14■■■■□ 3.38
RAB1A-202ENST00000409751 KIF27Q86VH2 1401 aa36.07■■■■□ 3.36
RAB1A-202ENST00000409751 CHD1O14646 1710 aa36.06■■■■□ 3.36
RAB1A-202ENST00000409751 MAGI1Q96QZ7 1491 aaPredicted RBP36.04■■■■□ 3.36
RAB1A-202ENST00000409751 CHIC1Q5VXU3 224 aa36.04■■■■□ 3.36
RAB1A-202ENST00000409751 ERICH3Q5RHP9 1530 aa36■■■■□ 3.35
RAB1A-202ENST00000409751 FBLN2P98095 1184 aa35.99■■■■□ 3.35
RAB1A-202ENST00000409751 ADAMTS12P58397 1594 aa35.94■■■■□ 3.34
RAB1A-202ENST00000409751 SYNJ2O15056 1496 aa35.91■■■■□ 3.34
RAB1A-202ENST00000409751 CHMP7Q8WUX9 453 aaPredicted RBP35.88■■■■□ 3.33
RAB1A-202ENST00000409751 RUSC2Q8N2Y8 1516 aa35.88■■■■□ 3.33
RAB1A-202ENST00000409751 CUL7Q14999 1698 aa35.83■■■■□ 3.33
RAB1A-202ENST00000409751 FHAD1B1AJZ9 1412 aa35.82■■■■□ 3.32
RAB1A-202ENST00000409751 OSCARQ8IYS5 282 aa35.81■■■■□ 3.32
RAB1A-202ENST00000409751 IGF1RP08069 1367 aa35.79■■■■□ 3.32
RAB1A-202ENST00000409751 GRIN2AQ12879 1464 aa35.74■■■■□ 3.31
RAB1A-202ENST00000409751 CARMIL1Q5VZK9 1371 aa35.65■■■■□ 3.3
RAB1A-202ENST00000409751 DNAJC5Q9H3Z4 198 aa35.63■■■■□ 3.29
RAB1A-202ENST00000409751 FAM9AQ8IZU1 332 aaPredicted RBP35.62■■■■□ 3.29
RAB1A-202ENST00000409751 EEA1Q15075 1411 aa35.6■■■■□ 3.29
RAB1A-202ENST00000409751 CEP170Q5SW79 1584 aa35.58■■■■□ 3.29
RAB1A-202ENST00000409751 CLASP1Q7Z460 1538 aa35.54■■■■□ 3.28
RAB1A-202ENST00000409751 RAPGEF2Q9Y4G8 1499 aa35.51■■■■□ 3.27
RAB1A-202ENST00000409751 NUP160Q12769 1436 aa35.5■■■■□ 3.27
RAB1A-202ENST00000409751 CSRNP3Q8WYN3 585 aa35.5■■■■□ 3.27
RAB1A-202ENST00000409751 PRXQ9BXM0 1461 aa35.41■■■■□ 3.26
RAB1A-202ENST00000409751 RIMBP3CA6NJZ7 1639 aa35.31■■■■□ 3.24
RAB1A-202ENST00000409751 RIMBP3BA6NNM3 1639 aa35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms