RNA–Protein interactions for RNA: ENST00000263774.8

NDUFS3-201, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFS3, Length 958 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-201ENST00000263774 NISCHQ9Y2I1 1504 aa52.76■■■■■ 6.04
NDUFS3-201ENST00000263774 CCDC180Q9P1Z9 1646 aa47.03■■■■■ 5.12
NDUFS3-201ENST00000263774 ABCC9O60706 1549 aa46.33■■■■■ 5.01
NDUFS3-201ENST00000263774 RB1CC1Q8TDY2 1594 aa44.41■■■■■ 4.7
NDUFS3-201ENST00000263774 NACADO15069 1562 aa44.29■■■■■ 4.68
NDUFS3-201ENST00000263774 DCAF8L2P0C7V8 631 aa44.23■■■■■ 4.67
NDUFS3-201ENST00000263774 MYO15BQ96JP2 1530 aa43.92■■■■■ 4.62
NDUFS3-201ENST00000263774 ZCCHC6Q5VYS8 1495 aaKnown RBP43.88■■■■■ 4.61
NDUFS3-201ENST00000263774 DCAF1Q9Y4B6 1507 aa43.63■■■■■ 4.57
NDUFS3-201ENST00000263774 UNC13AQ9UPW8 1703 aa43.45■■■■■ 4.55
NDUFS3-201ENST00000263774 PABPN1Q86U42 306 aaKnown RBP eCLIP43.25■■■■■ 4.51
NDUFS3-201ENST00000263774 BICRAQ9NZM4 1560 aa43.12■■■■■ 4.49
NDUFS3-201ENST00000263774 SCRIBQ14160 1630 aa42.89■■■■■ 4.46
NDUFS3-201ENST00000263774 DNAJC5BQ9UF47 199 aa42.84■■■■■ 4.45
NDUFS3-201ENST00000263774 SHROOM4Q9ULL8 1493 aa42.57■■■■■ 4.41
NDUFS3-201ENST00000263774 EIF4G1Q04637 1599 aaKnown RBP41.98■■■■■ 4.31
NDUFS3-201ENST00000263774 CC2D2AQ9P2K1 1620 aa41.9■■■■■ 4.3
NDUFS3-201ENST00000263774 CECR2Q9BXF3 1484 aa41.65■■■■■ 4.26
NDUFS3-201ENST00000263774 SMARCA4P51532 1647 aa41■■■■■ 4.15
NDUFS3-201ENST00000263774 BAZ1AQ9NRL2 1556 aaPredicted RBP40.9■■■■■ 4.14
NDUFS3-201ENST00000263774 NCAPD3P42695 1498 aa40.88■■■■■ 4.13
NDUFS3-201ENST00000263774 ATAD2BQ9ULI0 1458 aa40.86■■■■■ 4.13
NDUFS3-201ENST00000263774 SMARCA2P51531 1590 aa40.78■■■■■ 4.12
NDUFS3-201ENST00000263774 MROH2BQ7Z745 1585 aa40.67■■■■■ 4.1
NDUFS3-201ENST00000263774 HMGXB3Q12766 1538 aa40.64■■■■■ 4.1
NDUFS3-201ENST00000263774 PEG3Q9GZU2 1588 aa40.6■■■■■ 4.09
NDUFS3-201ENST00000263774 BAZ1BQ9UIG0 1483 aaKnown RBP40.5■■■■■ 4.07
NDUFS3-201ENST00000263774 WIZO95785 1651 aa40.22■■■■■ 4.03
NDUFS3-201ENST00000263774 RSF1Q96T23 1441 aaPredicted RBP40.09■■■■■ 4.01
NDUFS3-201ENST00000263774 NESP48681 1621 aa40.02■■■■■ 4
NDUFS3-201ENST00000263774 ERCC6Q03468 1493 aa39.94■■■■□ 3.98
NDUFS3-201ENST00000263774 LAMC3Q9Y6N6 1575 aa39.84■■■■□ 3.97
NDUFS3-201ENST00000263774 TOP2AP11388 1531 aaKnown RBP39.75■■■■□ 3.95
NDUFS3-201ENST00000263774 CADPSQ9ULU8 1353 aa39.68■■■■□ 3.94
NDUFS3-201ENST00000263774 CUX2O14529 1486 aa39.62■■■■□ 3.93
NDUFS3-201ENST00000263774 PDS5BQ9NTI5 1447 aa39.58■■■■□ 3.93
NDUFS3-201ENST00000263774 KIF21AQ7Z4S6 1674 aa39.52■■■■□ 3.92
NDUFS3-201ENST00000263774 THOC2Q8NI27 1593 aaKnown RBP39.46■■■■□ 3.91
NDUFS3-201ENST00000263774 CFTRP13569 1480 aa39.37■■■■□ 3.89
NDUFS3-201ENST00000263774 CCDC88BA6NC98 1476 aa39.3■■■■□ 3.88
NDUFS3-201ENST00000263774 FANCD2Q9BXW9 1451 aa39.22■■■■□ 3.87
NDUFS3-201ENST00000263774 MRC2Q9UBG0 1479 aa39.19■■■■□ 3.86
NDUFS3-201ENST00000263774 CEP164Q9UPV0 1460 aa39.19■■■■□ 3.86
NDUFS3-201ENST00000263774 WDR62O43379 1518 aa39.08■■■■□ 3.85
NDUFS3-201ENST00000263774 PRDM2Q13029 1718 aa39.05■■■■□ 3.84
NDUFS3-201ENST00000263774 URB2Q14146 1524 aaKnown RBP38.86■■■■□ 3.81
NDUFS3-201ENST00000263774 SUPT5HO00267 1087 aaKnown RBP38.86■■■■□ 3.81
NDUFS3-201ENST00000263774 DNAJC5Q9H3Z4 198 aa38.8■■■■□ 3.8
NDUFS3-201ENST00000263774 TOPBP1Q92547 1522 aa38.57■■■■□ 3.76
NDUFS3-201ENST00000263774 ABCC8Q09428 1581 aa38.53■■■■□ 3.76
NDUFS3-201ENST00000263774 DNMBPQ6XZF7 1577 aa38.48■■■■□ 3.75
NDUFS3-201ENST00000263774 IFT140Q96RY7 1462 aa38.38■■■■□ 3.73
NDUFS3-201ENST00000263774 ZNF608Q9ULD9 1512 aaPredicted RBP38.26■■■■□ 3.72
NDUFS3-201ENST00000263774 POLA1P09884 1462 aaPredicted RBP38.22■■■■□ 3.71
NDUFS3-201ENST00000263774 TARBP1Q13395 1621 aaKnown RBP38.17■■■■□ 3.7
NDUFS3-201ENST00000263774 CUX1P39880 1505 aa38.17■■■■□ 3.7
NDUFS3-201ENST00000263774 EIF4G3O43432 1585 aaKnown RBP38.08■■■■□ 3.69
NDUFS3-201ENST00000263774 FGD5Q6ZNL6 1462 aa38.08■■■■□ 3.69
NDUFS3-201ENST00000263774 RAD54L2Q9Y4B4 1467 aa38.07■■■■□ 3.68
NDUFS3-201ENST00000263774 SOGA1O94964 1423 aa38.05■■■■□ 3.68
NDUFS3-201ENST00000263774 AQRO60306 1485 aaKnown RBP eCLIP38.01■■■■□ 3.675e-6■■□□□ 14.3
NDUFS3-201ENST00000263774 OSCARQ8IYS5 282 aa37.95■■■■□ 3.67
NDUFS3-201ENST00000263774 TDRD9Q8NDG6 1382 aaKnown RBP37.89■■■■□ 3.66
NDUFS3-201ENST00000263774 WDR97A6NE52 1622 aa37.81■■■■□ 3.64
NDUFS3-201ENST00000263774 WRNQ14191 1432 aaPredicted RBP eCLIP37.79■■■■□ 3.64
NDUFS3-201ENST00000263774 BIVM-ERCC5R4GMW8 1640 aa37.75■■■■□ 3.63
NDUFS3-201ENST00000263774 TOP2BQ02880 1626 aa37.74■■■■□ 3.63
NDUFS3-201ENST00000263774 SYNJ1O43426 1573 aa37.73■■■■□ 3.63
NDUFS3-201ENST00000263774 ABCA10Q8WWZ4 1543 aa37.69■■■■□ 3.62
NDUFS3-201ENST00000263774 CHD1O14646 1710 aa37.67■■■■□ 3.62
NDUFS3-201ENST00000263774 GRIN2BQ13224 1484 aa37.64■■■■□ 3.62
NDUFS3-201ENST00000263774 SNAPC4Q5SXM2 1469 aa37.63■■■■□ 3.61
NDUFS3-201ENST00000263774 GAPVD1Q14C86 1478 aa37.61■■■■□ 3.61
NDUFS3-201ENST00000263774 FBLN2P98095 1184 aa37.6■■■■□ 3.61
NDUFS3-201ENST00000263774 ABCA5Q8WWZ7 1642 aa37.57■■■■□ 3.6
NDUFS3-201ENST00000263774 MAGI1Q96QZ7 1491 aaPredicted RBP37.56■■■■□ 3.6
NDUFS3-201ENST00000263774 PBRM1Q86U86 1689 aa37.55■■■■□ 3.6
NDUFS3-201ENST00000263774 CHMP7Q8WUX9 453 aaPredicted RBP37.45■■■■□ 3.59
NDUFS3-201ENST00000263774 SYNJ2O15056 1496 aa37.42■■■■□ 3.58
NDUFS3-201ENST00000263774 TRIM41Q8WV44 630 aa37.39■■■■□ 3.58
NDUFS3-201ENST00000263774 RIMBP3CA6NJZ7 1639 aa37.38■■■■□ 3.57
NDUFS3-201ENST00000263774 RIMBP3BA6NNM3 1639 aa37.38■■■■□ 3.57
NDUFS3-201ENST00000263774 RIMBP3Q9UFD9 1639 aa37.38■■■■□ 3.57
NDUFS3-201ENST00000263774 ARHGEF11O15085 1522 aa37.33■■■■□ 3.57
NDUFS3-201ENST00000263774 CLASP1Q7Z460 1538 aa37.25■■■■□ 3.55
NDUFS3-201ENST00000263774 ADAMTS12P58397 1594 aa37.23■■■■□ 3.55
NDUFS3-201ENST00000263774 ERICH3Q5RHP9 1530 aa37.23■■■■□ 3.55
NDUFS3-201ENST00000263774 FHAD1B1AJZ9 1412 aa37.16■■■■□ 3.54
NDUFS3-201ENST00000263774 GRIN2AQ12879 1464 aa37.15■■■■□ 3.54
NDUFS3-201ENST00000263774 KIF27Q86VH2 1401 aa37.02■■■■□ 3.52
NDUFS3-201ENST00000263774 ARAP1Q96P48 1450 aa37.02■■■■□ 3.52
NDUFS3-201ENST00000263774 CYB5RLQ6IPT4 315 aa37.02■■■■□ 3.52
NDUFS3-201ENST00000263774 NUP160Q12769 1436 aa37.01■■■■□ 3.51
NDUFS3-201ENST00000263774 CEP170Q5SW79 1584 aa36.99■■■■□ 3.51
NDUFS3-201ENST00000263774 IGF1RP08069 1367 aa36.93■■■■□ 3.5
NDUFS3-201ENST00000263774 CUL7Q14999 1698 aa36.83■■■■□ 3.49
NDUFS3-201ENST00000263774 SHROOM2Q13796 1616 aa36.76■■■■□ 3.48
NDUFS3-201ENST00000263774 ERCC6L2Q5T890 1561 aa36.74■■■■□ 3.47
NDUFS3-201ENST00000263774 CARMIL1Q5VZK9 1371 aa36.7■■■■□ 3.47
NDUFS3-201ENST00000263774 RUSC2Q8N2Y8 1516 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms