RNA–Protein interactions for RNA: ENST00000577198.5

KRT18P55-201, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 1 (best) BASIC

Gene KRT18P55, Length 1,950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-201ENST00000577198 NISCHQ9Y2I1 1504 aa47.27■■■■■ 5.16
KRT18P55-201ENST00000577198 CCDC180Q9P1Z9 1646 aa40.89■■■■■ 4.14
KRT18P55-201ENST00000577198 ZCCHC6Q5VYS8 1495 aaKnown RBP39.81■■■■□ 3.96
KRT18P55-201ENST00000577198 SHROOM4Q9ULL8 1493 aa39.03■■■■□ 3.84
KRT18P55-201ENST00000577198 DCAF1Q9Y4B6 1507 aa39■■■■□ 3.83
KRT18P55-201ENST00000577198 DCAF8L2P0C7V8 631 aa38.91■■■■□ 3.82
KRT18P55-201ENST00000577198 ABCC9O60706 1549 aa38.37■■■■□ 3.73
KRT18P55-201ENST00000577198 MYO15BQ96JP2 1530 aa38.32■■■■□ 3.72
KRT18P55-201ENST00000577198 NACADO15069 1562 aa37.96■■■■□ 3.67
KRT18P55-201ENST00000577198 SCRIBQ14160 1630 aa37.81■■■■□ 3.64
KRT18P55-201ENST00000577198 SUPT5HO00267 1087 aaKnown RBP37.75■■■■□ 3.63
KRT18P55-201ENST00000577198 RB1CC1Q8TDY2 1594 aa37.52■■■■□ 3.6
KRT18P55-201ENST00000577198 UNC13AQ9UPW8 1703 aa36.98■■■■□ 3.51
KRT18P55-201ENST00000577198 RSF1Q96T23 1441 aaPredicted RBP36.9■■■■□ 3.5
KRT18P55-201ENST00000577198 CECR2Q9BXF3 1484 aa36.8■■■■□ 3.48
KRT18P55-201ENST00000577198 MROH2BQ7Z745 1585 aa36.61■■■■□ 3.45
KRT18P55-201ENST00000577198 BICRAQ9NZM4 1560 aa36.56■■■■□ 3.44
KRT18P55-201ENST00000577198 CHIC1Q5VXU3 224 aa36.41■■■■□ 3.42
KRT18P55-201ENST00000577198 BAZ1AQ9NRL2 1556 aaPredicted RBP36.39■■■■□ 3.42
KRT18P55-201ENST00000577198 WIZO95785 1651 aa36.36■■■■□ 3.41
KRT18P55-201ENST00000577198 PABPN1Q86U42 306 aaKnown RBP eCLIP36.34■■■■□ 3.41
KRT18P55-201ENST00000577198 SMARCA4P51532 1647 aa36.24■■■■□ 3.39
KRT18P55-201ENST00000577198 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
KRT18P55-201ENST00000577198 PEG3Q9GZU2 1588 aa35.74■■■■□ 3.31
KRT18P55-201ENST00000577198 SMARCA2P51531 1590 aa35.62■■■■□ 3.29
KRT18P55-201ENST00000577198 CCDC88BA6NC98 1476 aa35.59■■■■□ 3.29
KRT18P55-201ENST00000577198 EIF4G1Q04637 1599 aaKnown RBP35.58■■■■□ 3.29
KRT18P55-201ENST00000577198 ATAD2BQ9ULI0 1458 aa35.52■■■■□ 3.28
KRT18P55-201ENST00000577198 TRIM41Q8WV44 630 aa35.36■■■■□ 3.25
KRT18P55-201ENST00000577198 BAZ1BQ9UIG0 1483 aaKnown RBP35.3■■■■□ 3.24
KRT18P55-201ENST00000577198 LOC105371045A0A1W2PR82 267 aa35.11■■■■□ 3.21
KRT18P55-201ENST00000577198 NCAPD3P42695 1498 aa35.09■■■■□ 3.21
KRT18P55-201ENST00000577198 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
KRT18P55-201ENST00000577198 HMGXB3Q12766 1538 aa35.06■■■■□ 3.2
KRT18P55-201ENST00000577198 FAM9AQ8IZU1 332 aaPredicted RBP34.85■■■■□ 3.17
KRT18P55-201ENST00000577198 CC2D2AQ9P2K1 1620 aa34.72■■■■□ 3.15
KRT18P55-201ENST00000577198 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
KRT18P55-201ENST00000577198 SYNJ1O43426 1573 aa34.59■■■■□ 3.13
KRT18P55-201ENST00000577198 SOGA1O94964 1423 aa34.5■■■■□ 3.11
KRT18P55-201ENST00000577198 CFTRP13569 1480 aa34.48■■■■□ 3.11
KRT18P55-201ENST00000577198 EHMT2Q96KQ7 1210 aa34.41■■■■□ 3.1
KRT18P55-201ENST00000577198 RUSC2Q8N2Y8 1516 aa34.4■■■■□ 3.1
KRT18P55-201ENST00000577198 TOP2BQ02880 1626 aa34.34■■■■□ 3.09
KRT18P55-201ENST00000577198 EEA1Q15075 1411 aa34.31■■■■□ 3.08
KRT18P55-201ENST00000577198 PRDM2Q13029 1718 aa34.3■■■■□ 3.08
KRT18P55-201ENST00000577198 BIVM-ERCC5R4GMW8 1640 aa34.29■■■■□ 3.08
KRT18P55-201ENST00000577198 CADPSQ9ULU8 1353 aa34.24■■■■□ 3.07
KRT18P55-201ENST00000577198 CSRNP3Q8WYN3 585 aa34.19■■■■□ 3.06
KRT18P55-201ENST00000577198 CUX1P39880 1505 aa34.18■■■■□ 3.06
KRT18P55-201ENST00000577198 PCGF6Q9BYE7 350 aa33.95■■■■□ 3.03
KRT18P55-201ENST00000577198 TNIKQ9UKE5 1360 aa33.95■■■■□ 3.03
KRT18P55-201ENST00000577198 KIF21BO75037 1637 aa33.94■■■■□ 3.02
KRT18P55-201ENST00000577198 GOLGA3Q08378 1498 aa33.93■■■■□ 3.02
KRT18P55-201ENST00000577198 DNAJC5BQ9UF47 199 aa33.92■■■■□ 3.02
KRT18P55-201ENST00000577198 NESP48681 1621 aa33.91■■■■□ 3.02
KRT18P55-201ENST00000577198 CEP164Q9UPV0 1460 aa33.88■■■■□ 3.01
KRT18P55-201ENST00000577198 FANCD2Q9BXW9 1451 aa33.87■■■■□ 3.01
KRT18P55-201ENST00000577198 CEP162Q5TB80 1403 aa33.84■■■■□ 3.01
KRT18P55-201ENST00000577198 UBTFP17480 764 aaKnown RBP33.78■■■■□ 3
KRT18P55-201ENST00000577198 LAMC3Q9Y6N6 1575 aa33.78■■■■□ 3
KRT18P55-201ENST00000577198 RAPGEF2Q9Y4G8 1499 aa33.75■■■□□ 2.99
KRT18P55-201ENST00000577198 TRIM26Q12899 539 aaPredicted RBP33.72■■■□□ 2.99
KRT18P55-201ENST00000577198 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
KRT18P55-201ENST00000577198 KIF27Q86VH2 1401 aa33.69■■■□□ 2.98
KRT18P55-201ENST00000577198 PRXQ9BXM0 1461 aa33.67■■■□□ 2.98
KRT18P55-201ENST00000577198 DNMBPQ6XZF7 1577 aa33.63■■■□□ 2.97
KRT18P55-201ENST00000577198 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
KRT18P55-201ENST00000577198 TOPBP1Q92547 1522 aa33.58■■■□□ 2.97
KRT18P55-201ENST00000577198 CUX2O14529 1486 aa33.55■■■□□ 2.96
KRT18P55-201ENST00000577198 URB2Q14146 1524 aaKnown RBP33.49■■■□□ 2.95
KRT18P55-201ENST00000577198 PDS5BQ9NTI5 1447 aa33.48■■■□□ 2.95
KRT18P55-201ENST00000577198 POLA1P09884 1462 aaPredicted RBP33.48■■■□□ 2.95
KRT18P55-201ENST00000577198 KIF21AQ7Z4S6 1674 aa33.46■■■□□ 2.95
KRT18P55-201ENST00000577198 CLIP1P30622 1438 aa33.44■■■□□ 2.94
KRT18P55-201ENST00000577198 PPARGC1BQ86YN6 1023 aaKnown RBP33.44■■■□□ 2.94
KRT18P55-201ENST00000577198 IGF1RP08069 1367 aa33.44■■■□□ 2.94
KRT18P55-201ENST00000577198 RAD54L2Q9Y4B4 1467 aa33.42■■■□□ 2.94
KRT18P55-201ENST00000577198 ABCA10Q8WWZ4 1543 aa33.37■■■□□ 2.93
KRT18P55-201ENST00000577198 HRCP23327 699 aa33.34■■■□□ 2.93
KRT18P55-201ENST00000577198 WDR97A6NE52 1622 aa33.27■■■□□ 2.92
KRT18P55-201ENST00000577198 CARMIL1Q5VZK9 1371 aa33.24■■■□□ 2.91
KRT18P55-201ENST00000577198 VPS8Q8N3P4 1428 aa33.22■■■□□ 2.91
KRT18P55-201ENST00000577198 RANGAP1P46060 587 aaPredicted RBP33.2■■■□□ 2.9
KRT18P55-201ENST00000577198 ARAP1Q96P48 1450 aa33.13■■■□□ 2.89
KRT18P55-201ENST00000577198 ABCA5Q8WWZ7 1642 aa33.09■■■□□ 2.89
KRT18P55-201ENST00000577198 TARBP1Q13395 1621 aaKnown RBP33.07■■■□□ 2.88
KRT18P55-201ENST00000577198 MRC2Q9UBG0 1479 aa33.06■■■□□ 2.88
KRT18P55-201ENST00000577198 CUL7Q14999 1698 aa33.04■■■□□ 2.88
KRT18P55-201ENST00000577198 TTBK1Q5TCY1 1321 aaPredicted RBP33.04■■■□□ 2.88
KRT18P55-201ENST00000577198 TDRD9Q8NDG6 1382 aaKnown RBP33.03■■■□□ 2.88
KRT18P55-201ENST00000577198 ARHGAP35Q9NRY4 1499 aa33.02■■■□□ 2.88
KRT18P55-201ENST00000577198 GAPVD1Q14C86 1478 aa32.97■■■□□ 2.87
KRT18P55-201ENST00000577198 WDR62O43379 1518 aa32.9■■■□□ 2.86
KRT18P55-201ENST00000577198 CTTNBP2Q8WZ74 1663 aa32.8■■■□□ 2.84
KRT18P55-201ENST00000577198 PBRM1Q86U86 1689 aa32.78■■■□□ 2.84
KRT18P55-201ENST00000577198 APLP2Q06481 763 aa32.76■■■□□ 2.84
KRT18P55-201ENST00000577198 AQRO60306 1485 aaKnown RBP eCLIP32.75■■■□□ 2.83
KRT18P55-201ENST00000577198 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
KRT18P55-201ENST00000577198 THOC2Q8NI27 1593 aaKnown RBP32.74■■■□□ 2.83
KRT18P55-201ENST00000577198 IFT140Q96RY7 1462 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms