RNA–Protein interactions for RNA: ENST00000374115.4

SLC18A3-201, Transcript of solute carrier family 18 member A3, humanhuman

APPRIS P1 BASIC

Gene SLC18A3, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC18A3-201ENST00000374115 NISCHQ9Y2I1 1504 aa46.45■■■■■ 5.03
SLC18A3-201ENST00000374115 CCDC180Q9P1Z9 1646 aa40.16■■■■■ 4.02
SLC18A3-201ENST00000374115 ZCCHC6Q5VYS8 1495 aaKnown RBP39.04■■■■□ 3.84
SLC18A3-201ENST00000374115 DCAF8L2P0C7V8 631 aa38.74■■■■□ 3.79
SLC18A3-201ENST00000374115 SHROOM4Q9ULL8 1493 aa38.5■■■■□ 3.75
SLC18A3-201ENST00000374115 ABCC9O60706 1549 aa38.24■■■■□ 3.71
SLC18A3-201ENST00000374115 DCAF1Q9Y4B6 1507 aa38.17■■■■□ 3.7
SLC18A3-201ENST00000374115 MYO15BQ96JP2 1530 aa37.58■■■■□ 3.61
SLC18A3-201ENST00000374115 SUPT5HO00267 1087 aaKnown RBP37.44■■■■□ 3.58
SLC18A3-201ENST00000374115 NACADO15069 1562 aa37.42■■■■□ 3.58
SLC18A3-201ENST00000374115 SCRIBQ14160 1630 aa37.33■■■■□ 3.57
SLC18A3-201ENST00000374115 RB1CC1Q8TDY2 1594 aa37.09■■■■□ 3.53
SLC18A3-201ENST00000374115 UNC13AQ9UPW8 1703 aa36.49■■■■□ 3.43
SLC18A3-201ENST00000374115 CHIC1Q5VXU3 224 aa36.35■■■■□ 3.41
SLC18A3-201ENST00000374115 CECR2Q9BXF3 1484 aa36.29■■■■□ 3.4
SLC18A3-201ENST00000374115 PABPN1Q86U42 306 aaKnown RBP eCLIP36.26■■■■□ 3.39
SLC18A3-201ENST00000374115 RSF1Q96T23 1441 aaPredicted RBP36.22■■■■□ 3.39
SLC18A3-201ENST00000374115 BICRAQ9NZM4 1560 aa36.13■■■■□ 3.37
SLC18A3-201ENST00000374115 MROH2BQ7Z745 1585 aa36.03■■■■□ 3.36
SLC18A3-201ENST00000374115 BAZ1AQ9NRL2 1556 aaPredicted RBP35.77■■■■□ 3.32
SLC18A3-201ENST00000374115 WIZO95785 1651 aa35.76■■■■□ 3.31
SLC18A3-201ENST00000374115 SMARCA4P51532 1647 aa35.65■■■■□ 3.3
SLC18A3-201ENST00000374115 LOC105371045A0A1W2PR82 267 aa35.34■■■■□ 3.25
SLC18A3-201ENST00000374115 PCGF6Q9BYE7 350 aa35.21■■■■□ 3.23
SLC18A3-201ENST00000374115 TOP2AP11388 1531 aaKnown RBP35.2■■■■□ 3.23
SLC18A3-201ENST00000374115 HRCP23327 699 aa35.13■■■■□ 3.21
SLC18A3-201ENST00000374115 PEG3Q9GZU2 1588 aa35.07■■■■□ 3.2
SLC18A3-201ENST00000374115 ATAD2BQ9ULI0 1458 aa35.06■■■■□ 3.2
SLC18A3-201ENST00000374115 CCDC88BA6NC98 1476 aa35■■■■□ 3.19
SLC18A3-201ENST00000374115 EIF4G1Q04637 1599 aaKnown RBP35■■■■□ 3.19
SLC18A3-201ENST00000374115 SMARCA2P51531 1590 aa34.97■■■■□ 3.19
SLC18A3-201ENST00000374115 BAZ1BQ9UIG0 1483 aaKnown RBP34.86■■■■□ 3.17
SLC18A3-201ENST00000374115 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
SLC18A3-201ENST00000374115 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
SLC18A3-201ENST00000374115 FAM9AQ8IZU1 332 aaPredicted RBP34.63■■■■□ 3.13
SLC18A3-201ENST00000374115 PPARGC1BQ86YN6 1023 aaKnown RBP34.55■■■■□ 3.12
SLC18A3-201ENST00000374115 HMGXB3Q12766 1538 aa34.52■■■■□ 3.12
SLC18A3-201ENST00000374115 CC2D2AQ9P2K1 1620 aa34.47■■■■□ 3.11
SLC18A3-201ENST00000374115 TRIM26Q12899 539 aaPredicted RBP34.46■■■■□ 3.11
SLC18A3-201ENST00000374115 ABCC8Q09428 1581 aa34.45■■■■□ 3.11
SLC18A3-201ENST00000374115 EHMT2Q96KQ7 1210 aa34.41■■■■□ 3.1
SLC18A3-201ENST00000374115 WRNQ14191 1432 aaPredicted RBP eCLIP34.05■■■■□ 3.04
SLC18A3-201ENST00000374115 CFTRP13569 1480 aa33.97■■■■□ 3.03
SLC18A3-201ENST00000374115 DNAJC5BQ9UF47 199 aa33.96■■■■□ 3.03
SLC18A3-201ENST00000374115 SYNJ1O43426 1573 aa33.95■■■■□ 3.03
SLC18A3-201ENST00000374115 SOGA1O94964 1423 aa33.87■■■■□ 3.01
SLC18A3-201ENST00000374115 CADPSQ9ULU8 1353 aa33.84■■■■□ 3.01
SLC18A3-201ENST00000374115 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
SLC18A3-201ENST00000374115 NESP48681 1621 aa33.68■■■□□ 2.98
SLC18A3-201ENST00000374115 TOP2BQ02880 1626 aa33.66■■■□□ 2.98
SLC18A3-201ENST00000374115 CUX1P39880 1505 aa33.63■■■□□ 2.97
SLC18A3-201ENST00000374115 PRDM2Q13029 1718 aa33.62■■■□□ 2.97
SLC18A3-201ENST00000374115 ZEB1P37275 1124 aaPredicted RBP33.59■■■□□ 2.97
SLC18A3-201ENST00000374115 BIVM-ERCC5R4GMW8 1640 aa33.57■■■□□ 2.96
SLC18A3-201ENST00000374115 CSRNP3Q8WYN3 585 aa33.54■■■□□ 2.96
SLC18A3-201ENST00000374115 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
SLC18A3-201ENST00000374115 EEA1Q15075 1411 aa33.47■■■□□ 2.95
SLC18A3-201ENST00000374115 LAMC3Q9Y6N6 1575 aa33.35■■■□□ 2.93
SLC18A3-201ENST00000374115 CEP162Q5TB80 1403 aa33.34■■■□□ 2.93
SLC18A3-201ENST00000374115 TTBK1Q5TCY1 1321 aaPredicted RBP33.28■■■□□ 2.92
SLC18A3-201ENST00000374115 UBTFP17480 764 aaKnown RBP33.24■■■□□ 2.91
SLC18A3-201ENST00000374115 TNIKQ9UKE5 1360 aa33.24■■■□□ 2.91
SLC18A3-201ENST00000374115 FGD5Q6ZNL6 1462 aa33.23■■■□□ 2.91
SLC18A3-201ENST00000374115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.21■■■□□ 2.91
SLC18A3-201ENST00000374115 CEP164Q9UPV0 1460 aa33.2■■■□□ 2.91
SLC18A3-201ENST00000374115 GOLGA3Q08378 1498 aa33.17■■■□□ 2.9
SLC18A3-201ENST00000374115 PDS5BQ9NTI5 1447 aa33.16■■■□□ 2.9
SLC18A3-201ENST00000374115 TOPBP1Q92547 1522 aa33.14■■■□□ 2.9
SLC18A3-201ENST00000374115 DNMBPQ6XZF7 1577 aa33.12■■■□□ 2.89
SLC18A3-201ENST00000374115 KIF27Q86VH2 1401 aa33.12■■■□□ 2.89
SLC18A3-201ENST00000374115 RAPGEF2Q9Y4G8 1499 aa33.11■■■□□ 2.89
SLC18A3-201ENST00000374115 KIF21AQ7Z4S6 1674 aa33.11■■■□□ 2.89
SLC18A3-201ENST00000374115 URB2Q14146 1524 aaKnown RBP33.1■■■□□ 2.89
SLC18A3-201ENST00000374115 KIF21BO75037 1637 aa33.09■■■□□ 2.89
SLC18A3-201ENST00000374115 CUX2O14529 1486 aa33.08■■■□□ 2.89
SLC18A3-201ENST00000374115 RAD54L2Q9Y4B4 1467 aa33.05■■■□□ 2.88
SLC18A3-201ENST00000374115 CCER1Q8TC90 406 aaPredicted RBP33.04■■■□□ 2.88
SLC18A3-201ENST00000374115 POLA1P09884 1462 aaPredicted RBP33.03■■■□□ 2.88
SLC18A3-201ENST00000374115 PRXQ9BXM0 1461 aa32.97■■■□□ 2.87
SLC18A3-201ENST00000374115 IGF1RP08069 1367 aa32.91■■■□□ 2.86
SLC18A3-201ENST00000374115 RANGAP1P46060 587 aaPredicted RBP32.91■■■□□ 2.86
SLC18A3-201ENST00000374115 ABCA10Q8WWZ4 1543 aa32.83■■■□□ 2.85
SLC18A3-201ENST00000374115 ERICH3Q5RHP9 1530 aa32.81■■■□□ 2.84
SLC18A3-201ENST00000374115 TDRD9Q8NDG6 1382 aaKnown RBP32.74■■■□□ 2.83
SLC18A3-201ENST00000374115 CLIP1P30622 1438 aa32.73■■■□□ 2.83
SLC18A3-201ENST00000374115 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
SLC18A3-201ENST00000374115 CARMIL1Q5VZK9 1371 aa32.72■■■□□ 2.83
SLC18A3-201ENST00000374115 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
SLC18A3-201ENST00000374115 ERCC6Q03468 1493 aa32.65■■■□□ 2.82
SLC18A3-201ENST00000374115 TARBP1Q13395 1621 aaKnown RBP32.59■■■□□ 2.81
SLC18A3-201ENST00000374115 VPS8Q8N3P4 1428 aa32.55■■■□□ 2.8
SLC18A3-201ENST00000374115 GAPVD1Q14C86 1478 aa32.54■■■□□ 2.8
SLC18A3-201ENST00000374115 ABCA5Q8WWZ7 1642 aa32.54■■■□□ 2.8
SLC18A3-201ENST00000374115 WDR62O43379 1518 aa32.52■■■□□ 2.8
SLC18A3-201ENST00000374115 AQRO60306 1485 aaKnown RBP eCLIP32.47■■■□□ 2.79
SLC18A3-201ENST00000374115 HNRNPUL2Q1KMD3 747 aaKnown RBP32.47■■■□□ 2.79
SLC18A3-201ENST00000374115 THOC2Q8NI27 1593 aaKnown RBP32.42■■■□□ 2.78
SLC18A3-201ENST00000374115 ZNF608Q9ULD9 1512 aaPredicted RBP32.4■■■□□ 2.78
SLC18A3-201ENST00000374115 CUL7Q14999 1698 aa32.4■■■□□ 2.78
SLC18A3-201ENST00000374115 ARAP1Q96P48 1450 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms