RNA–Protein interactions for RNA: ENST00000356708.11

ATP5C1-202, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP5C1, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-202ENST00000356708 NISCHQ9Y2I1 1504 aa54.4■■■■■ 6.3
ATP5C1-202ENST00000356708 ABCC9O60706 1549 aa48.93■■■■■ 5.42
ATP5C1-202ENST00000356708 CCDC180Q9P1Z9 1646 aa48.8■■■■■ 5.4
ATP5C1-202ENST00000356708 RB1CC1Q8TDY2 1594 aa46.53■■■■■ 5.04
ATP5C1-202ENST00000356708 NACADO15069 1562 aa46.2■■■■■ 4.99
ATP5C1-202ENST00000356708 DCAF8L2P0C7V8 631 aa46.08■■■■■ 4.97
ATP5C1-202ENST00000356708 DNAJC5BQ9UF47 199 aa46.02■■■■■ 4.96
ATP5C1-202ENST00000356708 PABPN1Q86U42 306 aaKnown RBP eCLIP45.61■■■■■ 4.89
ATP5C1-202ENST00000356708 MYO15BQ96JP2 1530 aa45.53■■■■■ 4.88
ATP5C1-202ENST00000356708 UNC13AQ9UPW8 1703 aa45.43■■■■■ 4.86
ATP5C1-202ENST00000356708 BICRAQ9NZM4 1560 aa45.16■■■■■ 4.82
ATP5C1-202ENST00000356708 ZCCHC6Q5VYS8 1495 aaKnown RBP45.04■■■■■ 4.8
ATP5C1-202ENST00000356708 DCAF1Q9Y4B6 1507 aa44.92■■■■■ 4.78
ATP5C1-202ENST00000356708 SHROOM4Q9ULL8 1493 aa44.54■■■■■ 4.72
ATP5C1-202ENST00000356708 SCRIBQ14160 1630 aa44.48■■■■■ 4.71
ATP5C1-202ENST00000356708 CC2D2AQ9P2K1 1620 aa44.18■■■■■ 4.66
ATP5C1-202ENST00000356708 CECR2Q9BXF3 1484 aa44.09■■■■■ 4.65
ATP5C1-202ENST00000356708 EIF4G1Q04637 1599 aaKnown RBP44.07■■■■■ 4.65
ATP5C1-202ENST00000356708 NCAPD3P42695 1498 aa42.68■■■■■ 4.42
ATP5C1-202ENST00000356708 ATAD2BQ9ULI0 1458 aa42.53■■■■■ 4.4
ATP5C1-202ENST00000356708 SMARCA4P51532 1647 aa42.43■■■■■ 4.38
ATP5C1-202ENST00000356708 SMARCA2P51531 1590 aa42.39■■■■■ 4.38
ATP5C1-202ENST00000356708 DNAJC5Q9H3Z4 198 aa42.33■■■■■ 4.37
ATP5C1-202ENST00000356708 HMGXB3Q12766 1538 aa42.3■■■■■ 4.36
ATP5C1-202ENST00000356708 ERCC6Q03468 1493 aa42.26■■■■■ 4.36
ATP5C1-202ENST00000356708 BAZ1AQ9NRL2 1556 aaPredicted RBP42.23■■■■■ 4.35
ATP5C1-202ENST00000356708 CUX2O14529 1486 aa42.19■■■■■ 4.34
ATP5C1-202ENST00000356708 BAZ1BQ9UIG0 1483 aaKnown RBP42.11■■■■■ 4.33
ATP5C1-202ENST00000356708 NESP48681 1621 aa42.02■■■■■ 4.32
ATP5C1-202ENST00000356708 PEG3Q9GZU2 1588 aa42.01■■■■■ 4.32
ATP5C1-202ENST00000356708 MROH2BQ7Z745 1585 aa41.92■■■■■ 4.3
ATP5C1-202ENST00000356708 LAMC3Q9Y6N6 1575 aa41.69■■■■■ 4.26
ATP5C1-202ENST00000356708 THOC2Q8NI27 1593 aaKnown RBP41.54■■■■■ 4.24
ATP5C1-202ENST00000356708 PDS5BQ9NTI5 1447 aa41.51■■■■■ 4.24
ATP5C1-202ENST00000356708 KIF21AQ7Z4S6 1674 aa41.42■■■■■ 4.22
ATP5C1-202ENST00000356708 WIZO95785 1651 aa41.41■■■■■ 4.22
ATP5C1-202ENST00000356708 CADPSQ9ULU8 1353 aa41.4■■■■■ 4.22
ATP5C1-202ENST00000356708 MRC2Q9UBG0 1479 aa41.11■■■■■ 4.17
ATP5C1-202ENST00000356708 RSF1Q96T23 1441 aaPredicted RBP41.05■■■■■ 4.16
ATP5C1-202ENST00000356708 WDR62O43379 1518 aa40.98■■■■■ 4.15
ATP5C1-202ENST00000356708 CEP164Q9UPV0 1460 aa40.94■■■■■ 4.14
ATP5C1-202ENST00000356708 FANCD2Q9BXW9 1451 aa40.9■■■■■ 4.14
ATP5C1-202ENST00000356708 CFTRP13569 1480 aa40.89■■■■■ 4.14
ATP5C1-202ENST00000356708 TOP2AP11388 1531 aaKnown RBP40.86■■■■■ 4.13
ATP5C1-202ENST00000356708 URB2Q14146 1524 aaKnown RBP40.55■■■■■ 4.08
ATP5C1-202ENST00000356708 CCDC88BA6NC98 1476 aa40.45■■■■■ 4.07
ATP5C1-202ENST00000356708 TRIM41Q8WV44 630 aa40.44■■■■■ 4.06
ATP5C1-202ENST00000356708 PRDM2Q13029 1718 aa40.39■■■■■ 4.06
ATP5C1-202ENST00000356708 OSCARQ8IYS5 282 aa40.36■■■■■ 4.05
ATP5C1-202ENST00000356708 IFT140Q96RY7 1462 aa40.13■■■■■ 4.02
ATP5C1-202ENST00000356708 TOPBP1Q92547 1522 aa40.11■■■■■ 4.01
ATP5C1-202ENST00000356708 ZNF608Q9ULD9 1512 aaPredicted RBP40.07■■■■■ 4.01
ATP5C1-202ENST00000356708 ABCC8Q09428 1581 aa40.04■■■■■ 4
ATP5C1-202ENST00000356708 DNMBPQ6XZF7 1577 aa39.93■■■■□ 3.98
ATP5C1-202ENST00000356708 EIF4G3O43432 1585 aaKnown RBP39.8■■■■□ 3.96
ATP5C1-202ENST00000356708 TARBP1Q13395 1621 aaKnown RBP39.73■■■■□ 3.95
ATP5C1-202ENST00000356708 AQRO60306 1485 aaKnown RBP eCLIP39.73■■■■□ 3.953e-7■■■■■ 28
ATP5C1-202ENST00000356708 RIMBP3CA6NJZ7 1639 aa39.73■■■■□ 3.95
ATP5C1-202ENST00000356708 RIMBP3BA6NNM3 1639 aa39.73■■■■□ 3.95
ATP5C1-202ENST00000356708 RIMBP3Q9UFD9 1639 aa39.73■■■■□ 3.95
ATP5C1-202ENST00000356708 POLA1P09884 1462 aaPredicted RBP39.69■■■■□ 3.94
ATP5C1-202ENST00000356708 ARHGEF11O15085 1522 aa39.61■■■■□ 3.93
ATP5C1-202ENST00000356708 RAD54L2Q9Y4B4 1467 aa39.57■■■■□ 3.93
ATP5C1-202ENST00000356708 SOGA1O94964 1423 aa39.56■■■■□ 3.92
ATP5C1-202ENST00000356708 FBLN2P98095 1184 aa39.54■■■■□ 3.92
ATP5C1-202ENST00000356708 CHD1O14646 1710 aa39.53■■■■□ 3.92
ATP5C1-202ENST00000356708 TDRD9Q8NDG6 1382 aaKnown RBP39.49■■■■□ 3.91
ATP5C1-202ENST00000356708 FGD5Q6ZNL6 1462 aa39.43■■■■□ 3.9
ATP5C1-202ENST00000356708 CYB5RLQ6IPT4 315 aa39.41■■■■□ 3.9
ATP5C1-202ENST00000356708 CUX1P39880 1505 aa39.39■■■■□ 3.9
ATP5C1-202ENST00000356708 WDR97A6NE52 1622 aa39.32■■■■□ 3.88
ATP5C1-202ENST00000356708 SNAPC4Q5SXM2 1469 aa39.29■■■■□ 3.88
ATP5C1-202ENST00000356708 SUPT5HO00267 1087 aaKnown RBP39.26■■■■□ 3.88
ATP5C1-202ENST00000356708 CHMP7Q8WUX9 453 aaPredicted RBP39.24■■■■□ 3.87
ATP5C1-202ENST00000356708 ARAP1Q96P48 1450 aa39.21■■■■□ 3.87
ATP5C1-202ENST00000356708 GRIN2BQ13224 1484 aa39.19■■■■□ 3.86
ATP5C1-202ENST00000356708 MAGI1Q96QZ7 1491 aaPredicted RBP39.19■■■■□ 3.86
ATP5C1-202ENST00000356708 CLASP1Q7Z460 1538 aa39.08■■■■□ 3.85
ATP5C1-202ENST00000356708 SYNJ1O43426 1573 aa39.08■■■■□ 3.85
ATP5C1-202ENST00000356708 SYNJ2O15056 1496 aa39.06■■■■□ 3.84
ATP5C1-202ENST00000356708 GAPVD1Q14C86 1478 aa39.05■■■■□ 3.84
ATP5C1-202ENST00000356708 TRHP20396 242 aaPredicted RBP39■■■■□ 3.83
ATP5C1-202ENST00000356708 ABCA10Q8WWZ4 1543 aa38.99■■■■□ 3.83
ATP5C1-202ENST00000356708 PBRM1Q86U86 1689 aa38.97■■■■□ 3.83
ATP5C1-202ENST00000356708 ABCA5Q8WWZ7 1642 aa38.89■■■■□ 3.82
ATP5C1-202ENST00000356708 WRNQ14191 1432 aaPredicted RBP eCLIP38.85■■■■□ 3.81
ATP5C1-202ENST00000356708 TOP2BQ02880 1626 aa38.73■■■■□ 3.79
ATP5C1-202ENST00000356708 BIVM-ERCC5R4GMW8 1640 aa38.71■■■■□ 3.79
ATP5C1-202ENST00000356708 GRIN2AQ12879 1464 aa38.67■■■■□ 3.78
ATP5C1-202ENST00000356708 ADAMTS12P58397 1594 aa38.61■■■■□ 3.77
ATP5C1-202ENST00000356708 FHAD1B1AJZ9 1412 aa38.55■■■■□ 3.76
ATP5C1-202ENST00000356708 NUP160Q12769 1436 aa38.55■■■■□ 3.76
ATP5C1-202ENST00000356708 CEP170Q5SW79 1584 aa38.52■■■■□ 3.76
ATP5C1-202ENST00000356708 ERICH3Q5RHP9 1530 aa38.49■■■■□ 3.75
ATP5C1-202ENST00000356708 ERCC6L2Q5T890 1561 aa38.48■■■■□ 3.75
ATP5C1-202ENST00000356708 SHROOM2Q13796 1616 aa38.35■■■■□ 3.73
ATP5C1-202ENST00000356708 JPH4Q96JJ6 628 aa38.24■■■■□ 3.71
ATP5C1-202ENST00000356708 PRG4Q92954 1404 aaPredicted RBP38.21■■■■□ 3.71
ATP5C1-202ENST00000356708 RUSC2Q8N2Y8 1516 aa38.05■■■■□ 3.68
ATP5C1-202ENST00000356708 IGF1RP08069 1367 aa38.04■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms