RNA–Protein interactions for RNA: ENST00000625260.2

PFKFB3-216, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PFKFB3, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-216ENST00000625260 NISCHQ9Y2I1 1504 aa48.67■■■■■ 5.38
PFKFB3-216ENST00000625260 CCDC180Q9P1Z9 1646 aa42.51■■■■■ 4.4
PFKFB3-216ENST00000625260 ZCCHC6Q5VYS8 1495 aaKnown RBP40.84■■■■■ 4.13
PFKFB3-216ENST00000625260 ABCC9O60706 1549 aa40.54■■■■■ 4.08
PFKFB3-216ENST00000625260 DCAF8L2P0C7V8 631 aa40.4■■■■■ 4.06
PFKFB3-216ENST00000625260 DCAF1Q9Y4B6 1507 aa40.19■■■■■ 4.02
PFKFB3-216ENST00000625260 MYO15BQ96JP2 1530 aa39.8■■■■□ 3.96
PFKFB3-216ENST00000625260 SHROOM4Q9ULL8 1493 aa39.71■■■■□ 3.95
PFKFB3-216ENST00000625260 NACADO15069 1562 aa39.64■■■■□ 3.94
PFKFB3-216ENST00000625260 RB1CC1Q8TDY2 1594 aa39.38■■■■□ 3.9
PFKFB3-216ENST00000625260 SCRIBQ14160 1630 aa39.19■■■■□ 3.86
PFKFB3-216ENST00000625260 UNC13AQ9UPW8 1703 aa38.66■■■■□ 3.78
PFKFB3-216ENST00000625260 BICRAQ9NZM4 1560 aa38.25■■■■□ 3.71
PFKFB3-216ENST00000625260 PABPN1Q86U42 306 aaKnown RBP eCLIP38.21■■■■□ 3.71
PFKFB3-216ENST00000625260 SUPT5HO00267 1087 aaKnown RBP38.06■■■■□ 3.68
PFKFB3-216ENST00000625260 CECR2Q9BXF3 1484 aa37.92■■■■□ 3.66
PFKFB3-216ENST00000625260 RSF1Q96T23 1441 aaPredicted RBP37.69■■■■□ 3.62
PFKFB3-216ENST00000625260 MROH2BQ7Z745 1585 aa37.65■■■■□ 3.62
PFKFB3-216ENST00000625260 BAZ1AQ9NRL2 1556 aaPredicted RBP37.58■■■■□ 3.61
PFKFB3-216ENST00000625260 SMARCA4P51532 1647 aa37.49■■■■□ 3.59
PFKFB3-216ENST00000625260 WIZO95785 1651 aa37.36■■■■□ 3.57
PFKFB3-216ENST00000625260 EIF4G1Q04637 1599 aaKnown RBP37.1■■■■□ 3.53
PFKFB3-216ENST00000625260 PEG3Q9GZU2 1588 aa36.97■■■■□ 3.51
PFKFB3-216ENST00000625260 ATAD2BQ9ULI0 1458 aa36.92■■■■□ 3.5
PFKFB3-216ENST00000625260 TOP2AP11388 1531 aaKnown RBP36.89■■■■□ 3.5
PFKFB3-216ENST00000625260 SMARCA2P51531 1590 aa36.85■■■■□ 3.49
PFKFB3-216ENST00000625260 BAZ1BQ9UIG0 1483 aaKnown RBP36.7■■■■□ 3.47
PFKFB3-216ENST00000625260 CC2D2AQ9P2K1 1620 aa36.64■■■■□ 3.46
PFKFB3-216ENST00000625260 NCAPD3P42695 1498 aa36.6■■■■□ 3.45
PFKFB3-216ENST00000625260 CCDC88BA6NC98 1476 aa36.54■■■■□ 3.44
PFKFB3-216ENST00000625260 HMGXB3Q12766 1538 aa36.53■■■■□ 3.44
PFKFB3-216ENST00000625260 CHIC1Q5VXU3 224 aa36.25■■■■□ 3.39
PFKFB3-216ENST00000625260 DNAJC5BQ9UF47 199 aa35.98■■■■□ 3.35
PFKFB3-216ENST00000625260 ABCC8Q09428 1581 aa35.76■■■■□ 3.32
PFKFB3-216ENST00000625260 CFTRP13569 1480 aa35.74■■■■□ 3.31
PFKFB3-216ENST00000625260 TRIM41Q8WV44 630 aa35.73■■■■□ 3.31
PFKFB3-216ENST00000625260 CADPSQ9ULU8 1353 aa35.67■■■■□ 3.3
PFKFB3-216ENST00000625260 PRDM2Q13029 1718 aa35.56■■■■□ 3.28
PFKFB3-216ENST00000625260 NESP48681 1621 aa35.53■■■■□ 3.28
PFKFB3-216ENST00000625260 WRNQ14191 1432 aaPredicted RBP eCLIP35.48■■■■□ 3.27
PFKFB3-216ENST00000625260 LAMC3Q9Y6N6 1575 aa35.4■■■■□ 3.26
PFKFB3-216ENST00000625260 SYNJ1O43426 1573 aa35.39■■■■□ 3.26
PFKFB3-216ENST00000625260 FANCD2Q9BXW9 1451 aa35.31■■■■□ 3.24
PFKFB3-216ENST00000625260 CUX1P39880 1505 aa35.21■■■■□ 3.23
PFKFB3-216ENST00000625260 TOP2BQ02880 1626 aa35.21■■■■□ 3.23
PFKFB3-216ENST00000625260 BIVM-ERCC5R4GMW8 1640 aa35.18■■■■□ 3.22
PFKFB3-216ENST00000625260 FAM9AQ8IZU1 332 aaPredicted RBP35.18■■■■□ 3.22
PFKFB3-216ENST00000625260 PDS5BQ9NTI5 1447 aa35.13■■■■□ 3.21
PFKFB3-216ENST00000625260 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
PFKFB3-216ENST00000625260 KIF21AQ7Z4S6 1674 aa35.08■■■■□ 3.21
PFKFB3-216ENST00000625260 SOGA1O94964 1423 aa35.02■■■■□ 3.2
PFKFB3-216ENST00000625260 RUSC2Q8N2Y8 1516 aa34.94■■■■□ 3.18
PFKFB3-216ENST00000625260 EEA1Q15075 1411 aa34.93■■■■□ 3.18
PFKFB3-216ENST00000625260 DNMBPQ6XZF7 1577 aa34.93■■■■□ 3.18
PFKFB3-216ENST00000625260 LOC105371045A0A1W2PR82 267 aa34.92■■■■□ 3.18
PFKFB3-216ENST00000625260 URB2Q14146 1524 aaKnown RBP34.9■■■■□ 3.18
PFKFB3-216ENST00000625260 TOPBP1Q92547 1522 aa34.9■■■■□ 3.18
PFKFB3-216ENST00000625260 FGD5Q6ZNL6 1462 aa34.86■■■■□ 3.17
PFKFB3-216ENST00000625260 EHMT2Q96KQ7 1210 aa34.77■■■■□ 3.16
PFKFB3-216ENST00000625260 ERCC6Q03468 1493 aa34.74■■■■□ 3.15
PFKFB3-216ENST00000625260 POLA1P09884 1462 aaPredicted RBP34.72■■■■□ 3.15
PFKFB3-216ENST00000625260 MRC2Q9UBG0 1479 aa34.72■■■■□ 3.15
PFKFB3-216ENST00000625260 CSRNP3Q8WYN3 585 aa34.69■■■■□ 3.14
PFKFB3-216ENST00000625260 RAD54L2Q9Y4B4 1467 aa34.65■■■■□ 3.14
PFKFB3-216ENST00000625260 CUX2O14529 1486 aa34.6■■■■□ 3.13
PFKFB3-216ENST00000625260 KIF27Q86VH2 1401 aa34.58■■■■□ 3.13
PFKFB3-216ENST00000625260 WDR62O43379 1518 aa34.54■■■■□ 3.12
PFKFB3-216ENST00000625260 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
PFKFB3-216ENST00000625260 ABCA10Q8WWZ4 1543 aa34.5■■■■□ 3.11
PFKFB3-216ENST00000625260 WDR97A6NE52 1622 aa34.45■■■■□ 3.1
PFKFB3-216ENST00000625260 KIF21BO75037 1637 aa34.39■■■■□ 3.1
PFKFB3-216ENST00000625260 TARBP1Q13395 1621 aaKnown RBP34.39■■■■□ 3.1
PFKFB3-216ENST00000625260 GOLGA3Q08378 1498 aa34.35■■■■□ 3.09
PFKFB3-216ENST00000625260 TDRD9Q8NDG6 1382 aaKnown RBP34.32■■■■□ 3.09
PFKFB3-216ENST00000625260 IGF1RP08069 1367 aa34.32■■■■□ 3.08
PFKFB3-216ENST00000625260 RAPGEF2Q9Y4G8 1499 aa34.31■■■■□ 3.08
PFKFB3-216ENST00000625260 PRXQ9BXM0 1461 aa34.29■■■■□ 3.08
PFKFB3-216ENST00000625260 UBTFP17480 764 aaKnown RBP34.27■■■■□ 3.08
PFKFB3-216ENST00000625260 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.08
PFKFB3-216ENST00000625260 IFT140Q96RY7 1462 aa34.24■■■■□ 3.07
PFKFB3-216ENST00000625260 TNIKQ9UKE5 1360 aa34.21■■■■□ 3.07
PFKFB3-216ENST00000625260 GAPVD1Q14C86 1478 aa34.21■■■■□ 3.07
PFKFB3-216ENST00000625260 ERICH3Q5RHP9 1530 aa34.2■■■■□ 3.06
PFKFB3-216ENST00000625260 CARMIL1Q5VZK9 1371 aa34.15■■■■□ 3.06
PFKFB3-216ENST00000625260 ZNF608Q9ULD9 1512 aaPredicted RBP34.15■■■■□ 3.06
PFKFB3-216ENST00000625260 AQRO60306 1485 aaKnown RBP eCLIP34.14■■■■□ 3.065e-7■■■■■ 41.4
PFKFB3-216ENST00000625260 PBRM1Q86U86 1689 aa34.06■■■■□ 3.04
PFKFB3-216ENST00000625260 CUL7Q14999 1698 aa34.05■■■■□ 3.04
PFKFB3-216ENST00000625260 CEP162Q5TB80 1403 aa34.02■■■■□ 3.04
PFKFB3-216ENST00000625260 EIF4G3O43432 1585 aaKnown RBP34.01■■■■□ 3.03
PFKFB3-216ENST00000625260 GRIN2BQ13224 1484 aa33.95■■■■□ 3.03
PFKFB3-216ENST00000625260 RANGAP1P46060 587 aaPredicted RBP33.9■■■■□ 3.02
PFKFB3-216ENST00000625260 ADAMTS12P58397 1594 aa33.84■■■■□ 3.01
PFKFB3-216ENST00000625260 CLIP1P30622 1438 aa33.81■■■■□ 3
PFKFB3-216ENST00000625260 SNAPC4Q5SXM2 1469 aa33.81■■■■□ 3
PFKFB3-216ENST00000625260 FHAD1B1AJZ9 1412 aa33.81■■■■□ 3
PFKFB3-216ENST00000625260 CTTNBP2Q8WZ74 1663 aa33.68■■■□□ 2.98
PFKFB3-216ENST00000625260 MAGI1Q96QZ7 1491 aaPredicted RBP33.67■■■□□ 2.98
PFKFB3-216ENST00000625260 SYNJ2O15056 1496 aa33.57■■■□□ 2.96
PFKFB3-216ENST00000625260 ARHGAP35Q9NRY4 1499 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms