RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 NISCHQ9Y2I1 1504 aa53.28■■■■■ 6.12
CDCP1-202ENST00000425231 CCDC180Q9P1Z9 1646 aa47.55■■■■■ 5.2
CDCP1-202ENST00000425231 ABCC9O60706 1549 aa47.08■■■■■ 5.13
CDCP1-202ENST00000425231 RB1CC1Q8TDY2 1594 aa45.02■■■■■ 4.8
CDCP1-202ENST00000425231 NACADO15069 1562 aa44.85■■■■■ 4.77
CDCP1-202ENST00000425231 DCAF8L2P0C7V8 631 aa44.74■■■■■ 4.75
CDCP1-202ENST00000425231 MYO15BQ96JP2 1530 aa44.43■■■■■ 4.7
CDCP1-202ENST00000425231 ZCCHC6Q5VYS8 1495 aaKnown RBP44.25■■■■■ 4.68
CDCP1-202ENST00000425231 DCAF1Q9Y4B6 1507 aa44.05■■■■■ 4.64
CDCP1-202ENST00000425231 UNC13AQ9UPW8 1703 aa44.03■■■■■ 4.64
CDCP1-202ENST00000425231 PABPN1Q86U42 306 aaKnown RBP eCLIP43.93■■■■■ 4.62
CDCP1-202ENST00000425231 DNAJC5BQ9UF47 199 aa43.78■■■■■ 4.6
CDCP1-202ENST00000425231 BICRAQ9NZM4 1560 aa43.73■■■■■ 4.59
CDCP1-202ENST00000425231 SCRIBQ14160 1630 aa43.36■■■■■ 4.53
CDCP1-202ENST00000425231 SHROOM4Q9ULL8 1493 aa43.16■■■■■ 4.5
CDCP1-202ENST00000425231 EIF4G1Q04637 1599 aaKnown RBP42.6■■■■■ 4.41
CDCP1-202ENST00000425231 CC2D2AQ9P2K1 1620 aa42.56■■■■■ 4.4
CDCP1-202ENST00000425231 CECR2Q9BXF3 1484 aa42.34■■■■■ 4.37
CDCP1-202ENST00000425231 SMARCA4P51532 1647 aa41.43■■■■■ 4.22
CDCP1-202ENST00000425231 NCAPD3P42695 1498 aa41.43■■■■■ 4.22
CDCP1-202ENST00000425231 ATAD2BQ9ULI0 1458 aa41.37■■■■■ 4.21
CDCP1-202ENST00000425231 BAZ1AQ9NRL2 1556 aaPredicted RBP41.3■■■■■ 4.2
CDCP1-202ENST00000425231 SMARCA2P51531 1590 aa41.25■■■■■ 4.19
CDCP1-202ENST00000425231 HMGXB3Q12766 1538 aa41.14■■■■■ 4.18
CDCP1-202ENST00000425231 MROH2BQ7Z745 1585 aa41.07■■■■■ 4.16
CDCP1-202ENST00000425231 PEG3Q9GZU2 1588 aa41.05■■■■■ 4.16
CDCP1-202ENST00000425231 BAZ1BQ9UIG0 1483 aaKnown RBP40.96■■■■■ 4.15
CDCP1-202ENST00000425231 NESP48681 1621 aa40.61■■■■■ 4.09
CDCP1-202ENST00000425231 WIZO95785 1651 aa40.58■■■■■ 4.09
CDCP1-202ENST00000425231 ERCC6Q03468 1493 aa40.57■■■■■ 4.09
CDCP1-202ENST00000425231 RSF1Q96T23 1441 aaPredicted RBP40.41■■■■■ 4.06
CDCP1-202ENST00000425231 LAMC3Q9Y6N6 1575 aa40.39■■■■■ 4.06
CDCP1-202ENST00000425231 CUX2O14529 1486 aa40.36■■■■■ 4.05
CDCP1-202ENST00000425231 CADPSQ9ULU8 1353 aa40.19■■■■■ 4.02
CDCP1-202ENST00000425231 PDS5BQ9NTI5 1447 aa40.13■■■■■ 4.01
CDCP1-202ENST00000425231 TOP2AP11388 1531 aaKnown RBP40.09■■■■■ 4.01
CDCP1-202ENST00000425231 THOC2Q8NI27 1593 aaKnown RBP40.07■■■■■ 4
CDCP1-202ENST00000425231 KIF21AQ7Z4S6 1674 aa40.07■■■■■ 4
CDCP1-202ENST00000425231 CFTRP13569 1480 aa39.84■■■■□ 3.97
CDCP1-202ENST00000425231 DNAJC5Q9H3Z4 198 aa39.8■■■■□ 3.96
CDCP1-202ENST00000425231 MRC2Q9UBG0 1479 aa39.75■■■■□ 3.95
CDCP1-202ENST00000425231 FANCD2Q9BXW9 1451 aa39.71■■■■□ 3.95
CDCP1-202ENST00000425231 CEP164Q9UPV0 1460 aa39.69■■■■□ 3.94
CDCP1-202ENST00000425231 CCDC88BA6NC98 1476 aa39.67■■■■□ 3.94
CDCP1-202ENST00000425231 WDR62O43379 1518 aa39.64■■■■□ 3.94
CDCP1-202ENST00000425231 PRDM2Q13029 1718 aa39.43■■■■□ 3.9
CDCP1-202ENST00000425231 URB2Q14146 1524 aaKnown RBP39.36■■■■□ 3.89
CDCP1-202ENST00000425231 TOPBP1Q92547 1522 aa39.02■■■■□ 3.84
CDCP1-202ENST00000425231 SUPT5HO00267 1087 aaKnown RBP38.97■■■■□ 3.83
CDCP1-202ENST00000425231 ABCC8Q09428 1581 aa38.97■■■■□ 3.83
CDCP1-202ENST00000425231 DNMBPQ6XZF7 1577 aa38.91■■■■□ 3.82
CDCP1-202ENST00000425231 IFT140Q96RY7 1462 aa38.89■■■■□ 3.82
CDCP1-202ENST00000425231 ZNF608Q9ULD9 1512 aaPredicted RBP38.8■■■■□ 3.8
CDCP1-202ENST00000425231 POLA1P09884 1462 aaPredicted RBP38.66■■■■□ 3.78
CDCP1-202ENST00000425231 TARBP1Q13395 1621 aaKnown RBP38.65■■■■□ 3.78
CDCP1-202ENST00000425231 OSCARQ8IYS5 282 aa38.63■■■■□ 3.77
CDCP1-202ENST00000425231 EIF4G3O43432 1585 aaKnown RBP38.58■■■■□ 3.77
CDCP1-202ENST00000425231 CUX1P39880 1505 aa38.55■■■■□ 3.76
CDCP1-202ENST00000425231 AQRO60306 1485 aaKnown RBP eCLIP38.52■■■■□ 3.767e-7■■□□□ 13.1
CDCP1-202ENST00000425231 RAD54L2Q9Y4B4 1467 aa38.52■■■■□ 3.76
CDCP1-202ENST00000425231 SOGA1O94964 1423 aa38.5■■■■□ 3.75
CDCP1-202ENST00000425231 FGD5Q6ZNL6 1462 aa38.49■■■■□ 3.75
CDCP1-202ENST00000425231 TDRD9Q8NDG6 1382 aaKnown RBP38.36■■■■□ 3.73
CDCP1-202ENST00000425231 WDR97A6NE52 1622 aa38.26■■■■□ 3.72
CDCP1-202ENST00000425231 TRIM41Q8WV44 630 aa38.21■■■■□ 3.71
CDCP1-202ENST00000425231 CHD1O14646 1710 aa38.19■■■■□ 3.7
CDCP1-202ENST00000425231 FBLN2P98095 1184 aa38.13■■■■□ 3.7
CDCP1-202ENST00000425231 SNAPC4Q5SXM2 1469 aa38.11■■■■□ 3.69
CDCP1-202ENST00000425231 ABCA10Q8WWZ4 1543 aa38.09■■■■□ 3.69
CDCP1-202ENST00000425231 GRIN2BQ13224 1484 aa38.09■■■■□ 3.69
CDCP1-202ENST00000425231 WRNQ14191 1432 aaPredicted RBP eCLIP38.08■■■■□ 3.69
CDCP1-202ENST00000425231 TOP2BQ02880 1626 aa38.06■■■■□ 3.68
CDCP1-202ENST00000425231 BIVM-ERCC5R4GMW8 1640 aa38.05■■■■□ 3.68
CDCP1-202ENST00000425231 RIMBP3CA6NJZ7 1639 aa38.04■■■■□ 3.68
CDCP1-202ENST00000425231 RIMBP3BA6NNM3 1639 aa38.04■■■■□ 3.68
CDCP1-202ENST00000425231 RIMBP3Q9UFD9 1639 aa38.04■■■■□ 3.68
CDCP1-202ENST00000425231 MAGI1Q96QZ7 1491 aaPredicted RBP38.04■■■■□ 3.68
CDCP1-202ENST00000425231 GAPVD1Q14C86 1478 aa38.03■■■■□ 3.68
CDCP1-202ENST00000425231 SYNJ1O43426 1573 aa38.03■■■■□ 3.68
CDCP1-202ENST00000425231 ARHGEF11O15085 1522 aa37.98■■■■□ 3.67
CDCP1-202ENST00000425231 ABCA5Q8WWZ7 1642 aa37.97■■■■□ 3.67
CDCP1-202ENST00000425231 PBRM1Q86U86 1689 aa37.96■■■■□ 3.67
CDCP1-202ENST00000425231 CHMP7Q8WUX9 453 aaPredicted RBP37.95■■■■□ 3.67
CDCP1-202ENST00000425231 SYNJ2O15056 1496 aa37.91■■■■□ 3.66
CDCP1-202ENST00000425231 CLASP1Q7Z460 1538 aa37.79■■■■□ 3.64
CDCP1-202ENST00000425231 CYB5RLQ6IPT4 315 aa37.69■■■■□ 3.62
CDCP1-202ENST00000425231 ARAP1Q96P48 1450 aa37.65■■■■□ 3.62
CDCP1-202ENST00000425231 ADAMTS12P58397 1594 aa37.63■■■■□ 3.61
CDCP1-202ENST00000425231 ERICH3Q5RHP9 1530 aa37.61■■■■□ 3.61
CDCP1-202ENST00000425231 GRIN2AQ12879 1464 aa37.6■■■■□ 3.61
CDCP1-202ENST00000425231 FHAD1B1AJZ9 1412 aa37.57■■■■□ 3.6
CDCP1-202ENST00000425231 NUP160Q12769 1436 aa37.47■■■■□ 3.59
CDCP1-202ENST00000425231 CEP170Q5SW79 1584 aa37.45■■■■□ 3.59
CDCP1-202ENST00000425231 KIF27Q86VH2 1401 aa37.32■■■■□ 3.57
CDCP1-202ENST00000425231 IGF1RP08069 1367 aa37.29■■■■□ 3.56
CDCP1-202ENST00000425231 ERCC6L2Q5T890 1561 aa37.26■■■■□ 3.56
CDCP1-202ENST00000425231 SHROOM2Q13796 1616 aa37.24■■■■□ 3.55
CDCP1-202ENST00000425231 CUL7Q14999 1698 aa37.14■■■■□ 3.54
CDCP1-202ENST00000425231 JPH4Q96JJ6 628 aa37.11■■■■□ 3.53
CDCP1-202ENST00000425231 RUSC2Q8N2Y8 1516 aa37.09■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms