RNA–Protein interactions for RNA: ENST00000641970.1

LINC02228-203, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 1,355 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-203ENST00000641970 NISCHQ9Y2I1 1504 aa52.78■■■■■ 6.04
LINC02228-203ENST00000641970 CCDC180Q9P1Z9 1646 aa46.97■■■■■ 5.11
LINC02228-203ENST00000641970 ABCC9O60706 1549 aa46.41■■■■■ 5.02
LINC02228-203ENST00000641970 RB1CC1Q8TDY2 1594 aa44.48■■■■■ 4.71
LINC02228-203ENST00000641970 NACADO15069 1562 aa44.36■■■■■ 4.69
LINC02228-203ENST00000641970 DCAF8L2P0C7V8 631 aa44.33■■■■■ 4.69
LINC02228-203ENST00000641970 MYO15BQ96JP2 1530 aa44.02■■■■■ 4.64
LINC02228-203ENST00000641970 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
LINC02228-203ENST00000641970 DCAF1Q9Y4B6 1507 aa43.67■■■■■ 4.58
LINC02228-203ENST00000641970 PABPN1Q86U42 306 aaKnown RBP eCLIP43.37■■■■■ 4.53
LINC02228-203ENST00000641970 UNC13AQ9UPW8 1703 aa43.16■■■■■ 4.5
LINC02228-203ENST00000641970 BICRAQ9NZM4 1560 aa43.07■■■■■ 4.49
LINC02228-203ENST00000641970 DNAJC5BQ9UF47 199 aa42.94■■■■■ 4.46
LINC02228-203ENST00000641970 SCRIBQ14160 1630 aa42.85■■■■■ 4.45
LINC02228-203ENST00000641970 SHROOM4Q9ULL8 1493 aa42.74■■■■■ 4.43
LINC02228-203ENST00000641970 EIF4G1Q04637 1599 aaKnown RBP42.01■■■■■ 4.32
LINC02228-203ENST00000641970 CC2D2AQ9P2K1 1620 aa41.9■■■■■ 4.3
LINC02228-203ENST00000641970 CECR2Q9BXF3 1484 aa41.78■■■■■ 4.28
LINC02228-203ENST00000641970 NCAPD3P42695 1498 aa40.99■■■■■ 4.15
LINC02228-203ENST00000641970 SMARCA4P51532 1647 aa40.96■■■■■ 4.15
LINC02228-203ENST00000641970 BAZ1AQ9NRL2 1556 aaPredicted RBP40.94■■■■■ 4.14
LINC02228-203ENST00000641970 ATAD2BQ9ULI0 1458 aa40.93■■■■■ 4.14
LINC02228-203ENST00000641970 SMARCA2P51531 1590 aa40.84■■■■■ 4.13
LINC02228-203ENST00000641970 HMGXB3Q12766 1538 aa40.69■■■■■ 4.1
LINC02228-203ENST00000641970 MROH2BQ7Z745 1585 aa40.64■■■■■ 4.1
LINC02228-203ENST00000641970 PEG3Q9GZU2 1588 aa40.61■■■■■ 4.09
LINC02228-203ENST00000641970 BAZ1BQ9UIG0 1483 aaKnown RBP40.57■■■■■ 4.09
LINC02228-203ENST00000641970 RSF1Q96T23 1441 aaPredicted RBP40.11■■■■■ 4.01
LINC02228-203ENST00000641970 WIZO95785 1651 aa40.09■■■■■ 4.01
LINC02228-203ENST00000641970 ERCC6Q03468 1493 aa40.09■■■■■ 4.01
LINC02228-203ENST00000641970 NESP48681 1621 aa40.02■■■■■ 4
LINC02228-203ENST00000641970 LAMC3Q9Y6N6 1575 aa39.88■■■■□ 3.97
LINC02228-203ENST00000641970 CADPSQ9ULU8 1353 aa39.79■■■■□ 3.96
LINC02228-203ENST00000641970 CUX2O14529 1486 aa39.79■■■■□ 3.96
LINC02228-203ENST00000641970 TOP2AP11388 1531 aaKnown RBP39.75■■■■□ 3.95
LINC02228-203ENST00000641970 PDS5BQ9NTI5 1447 aa39.74■■■■□ 3.95
LINC02228-203ENST00000641970 CFTRP13569 1480 aa39.45■■■■□ 3.91
LINC02228-203ENST00000641970 THOC2Q8NI27 1593 aaKnown RBP39.44■■■■□ 3.9
LINC02228-203ENST00000641970 KIF21AQ7Z4S6 1674 aa39.39■■■■□ 3.9
LINC02228-203ENST00000641970 CCDC88BA6NC98 1476 aa39.31■■■■□ 3.88
LINC02228-203ENST00000641970 FANCD2Q9BXW9 1451 aa39.3■■■■□ 3.88
LINC02228-203ENST00000641970 MRC2Q9UBG0 1479 aa39.3■■■■□ 3.88
LINC02228-203ENST00000641970 CEP164Q9UPV0 1460 aa39.28■■■■□ 3.88
LINC02228-203ENST00000641970 WDR62O43379 1518 aa39.14■■■■□ 3.86
LINC02228-203ENST00000641970 DNAJC5Q9H3Z4 198 aa39.03■■■■□ 3.84
LINC02228-203ENST00000641970 URB2Q14146 1524 aaKnown RBP38.88■■■■□ 3.81
LINC02228-203ENST00000641970 SUPT5HO00267 1087 aaKnown RBP38.85■■■■□ 3.81
LINC02228-203ENST00000641970 PRDM2Q13029 1718 aa38.82■■■■□ 3.8
LINC02228-203ENST00000641970 ABCC8Q09428 1581 aa38.63■■■■□ 3.77
LINC02228-203ENST00000641970 TOPBP1Q92547 1522 aa38.6■■■■□ 3.77
LINC02228-203ENST00000641970 DNMBPQ6XZF7 1577 aa38.49■■■■□ 3.75
LINC02228-203ENST00000641970 IFT140Q96RY7 1462 aa38.49■■■■□ 3.75
LINC02228-203ENST00000641970 ZNF608Q9ULD9 1512 aaPredicted RBP38.29■■■■□ 3.72
LINC02228-203ENST00000641970 POLA1P09884 1462 aaPredicted RBP38.25■■■■□ 3.71
LINC02228-203ENST00000641970 CUX1P39880 1505 aa38.15■■■■□ 3.7
LINC02228-203ENST00000641970 SOGA1O94964 1423 aa38.15■■■■□ 3.7
LINC02228-203ENST00000641970 OSCARQ8IYS5 282 aa38.14■■■■□ 3.7
LINC02228-203ENST00000641970 TARBP1Q13395 1621 aaKnown RBP38.12■■■■□ 3.69
LINC02228-203ENST00000641970 FGD5Q6ZNL6 1462 aa38.11■■■■□ 3.69
LINC02228-203ENST00000641970 RAD54L2Q9Y4B4 1467 aa38.08■■■■□ 3.69
LINC02228-203ENST00000641970 AQRO60306 1485 aaKnown RBP eCLIP38.07■■■■□ 3.68
LINC02228-203ENST00000641970 EIF4G3O43432 1585 aaKnown RBP38.06■■■■□ 3.68
LINC02228-203ENST00000641970 TDRD9Q8NDG6 1382 aaKnown RBP37.97■■■■□ 3.67
LINC02228-203ENST00000641970 WDR97A6NE52 1622 aa37.86■■■■□ 3.65
LINC02228-203ENST00000641970 WRNQ14191 1432 aaPredicted RBP eCLIP37.85■■■■□ 3.65
LINC02228-203ENST00000641970 FBLN2P98095 1184 aa37.74■■■■□ 3.63
LINC02228-203ENST00000641970 ABCA10Q8WWZ4 1543 aa37.74■■■■□ 3.63
LINC02228-203ENST00000641970 GRIN2BQ13224 1484 aa37.73■■■■□ 3.63
LINC02228-203ENST00000641970 TOP2BQ02880 1626 aa37.7■■■■□ 3.63
LINC02228-203ENST00000641970 SNAPC4Q5SXM2 1469 aa37.7■■■■□ 3.63
LINC02228-203ENST00000641970 GAPVD1Q14C86 1478 aa37.67■■■■□ 3.62
LINC02228-203ENST00000641970 MAGI1Q96QZ7 1491 aaPredicted RBP37.66■■■■□ 3.62
LINC02228-203ENST00000641970 SYNJ1O43426 1573 aa37.65■■■■□ 3.62
LINC02228-203ENST00000641970 BIVM-ERCC5R4GMW8 1640 aa37.64■■■■□ 3.62
LINC02228-203ENST00000641970 CHMP7Q8WUX9 453 aaPredicted RBP37.6■■■■□ 3.61
LINC02228-203ENST00000641970 TRIM41Q8WV44 630 aa37.57■■■■□ 3.61
LINC02228-203ENST00000641970 CHD1O14646 1710 aa37.53■■■■□ 3.6
LINC02228-203ENST00000641970 ABCA5Q8WWZ7 1642 aa37.53■■■■□ 3.6
LINC02228-203ENST00000641970 SYNJ2O15056 1496 aa37.52■■■■□ 3.6
LINC02228-203ENST00000641970 ARHGEF11O15085 1522 aa37.41■■■■□ 3.58
LINC02228-203ENST00000641970 PBRM1Q86U86 1689 aa37.4■■■■□ 3.58
LINC02228-203ENST00000641970 RIMBP3CA6NJZ7 1639 aa37.37■■■■□ 3.57
LINC02228-203ENST00000641970 RIMBP3BA6NNM3 1639 aa37.37■■■■□ 3.57
LINC02228-203ENST00000641970 RIMBP3Q9UFD9 1639 aa37.37■■■■□ 3.57
LINC02228-203ENST00000641970 ERICH3Q5RHP9 1530 aa37.27■■■■□ 3.56
LINC02228-203ENST00000641970 CLASP1Q7Z460 1538 aa37.27■■■■□ 3.56
LINC02228-203ENST00000641970 FHAD1B1AJZ9 1412 aa37.25■■■■□ 3.55
LINC02228-203ENST00000641970 ADAMTS12P58397 1594 aa37.22■■■■□ 3.55
LINC02228-203ENST00000641970 GRIN2AQ12879 1464 aa37.22■■■■□ 3.55
LINC02228-203ENST00000641970 CYB5RLQ6IPT4 315 aa37.17■■■■□ 3.54
LINC02228-203ENST00000641970 KIF27Q86VH2 1401 aa37.11■■■■□ 3.53
LINC02228-203ENST00000641970 ARAP1Q96P48 1450 aa37.1■■■■□ 3.53
LINC02228-203ENST00000641970 NUP160Q12769 1436 aa37.09■■■■□ 3.53
LINC02228-203ENST00000641970 IGF1RP08069 1367 aa37■■■■□ 3.51
LINC02228-203ENST00000641970 CEP170Q5SW79 1584 aa36.97■■■■□ 3.51
LINC02228-203ENST00000641970 CUL7Q14999 1698 aa36.79■■■■□ 3.48
LINC02228-203ENST00000641970 CARMIL1Q5VZK9 1371 aa36.78■■■■□ 3.48
LINC02228-203ENST00000641970 JPH4Q96JJ6 628 aa36.76■■■■□ 3.47
LINC02228-203ENST00000641970 SHROOM2Q13796 1616 aa36.73■■■■□ 3.47
LINC02228-203ENST00000641970 ERCC6L2Q5T890 1561 aa36.69■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms