RNA–Protein interactions for RNA: ENST00000615093.1

RAB43-208, Transcript of RAB43, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB43, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-208ENST00000615093 NISCHQ9Y2I1 1504 aa53.55■■■■■ 6.16
RAB43-208ENST00000615093 CCDC180Q9P1Z9 1646 aa47.89■■■■■ 5.26
RAB43-208ENST00000615093 ABCC9O60706 1549 aa47.4■■■■■ 5.18
RAB43-208ENST00000615093 RB1CC1Q8TDY2 1594 aa45.35■■■■■ 4.85
RAB43-208ENST00000615093 NACADO15069 1562 aa45.16■■■■■ 4.82
RAB43-208ENST00000615093 DCAF8L2P0C7V8 631 aa44.92■■■■■ 4.78
RAB43-208ENST00000615093 MYO15BQ96JP2 1530 aa44.7■■■■■ 4.75
RAB43-208ENST00000615093 ZCCHC6Q5VYS8 1495 aaKnown RBP44.47■■■■■ 4.71
RAB43-208ENST00000615093 UNC13AQ9UPW8 1703 aa44.36■■■■■ 4.69
RAB43-208ENST00000615093 DCAF1Q9Y4B6 1507 aa44.29■■■■■ 4.68
RAB43-208ENST00000615093 PABPN1Q86U42 306 aaKnown RBP eCLIP44.17■■■■■ 4.66
RAB43-208ENST00000615093 DNAJC5BQ9UF47 199 aa44.07■■■■■ 4.65
RAB43-208ENST00000615093 BICRAQ9NZM4 1560 aa44.03■■■■■ 4.64
RAB43-208ENST00000615093 SCRIBQ14160 1630 aa43.62■■■■■ 4.57
RAB43-208ENST00000615093 SHROOM4Q9ULL8 1493 aa43.49■■■■■ 4.55
RAB43-208ENST00000615093 EIF4G1Q04637 1599 aaKnown RBP42.89■■■■■ 4.46
RAB43-208ENST00000615093 CC2D2AQ9P2K1 1620 aa42.87■■■■■ 4.45
RAB43-208ENST00000615093 CECR2Q9BXF3 1484 aa42.66■■■■■ 4.42
RAB43-208ENST00000615093 SMARCA4P51532 1647 aa41.69■■■■■ 4.26
RAB43-208ENST00000615093 NCAPD3P42695 1498 aa41.67■■■■■ 4.26
RAB43-208ENST00000615093 ATAD2BQ9ULI0 1458 aa41.6■■■■■ 4.25
RAB43-208ENST00000615093 BAZ1AQ9NRL2 1556 aaPredicted RBP41.54■■■■■ 4.24
RAB43-208ENST00000615093 SMARCA2P51531 1590 aa41.52■■■■■ 4.24
RAB43-208ENST00000615093 HMGXB3Q12766 1538 aa41.42■■■■■ 4.22
RAB43-208ENST00000615093 PEG3Q9GZU2 1588 aa41.29■■■■■ 4.2
RAB43-208ENST00000615093 MROH2BQ7Z745 1585 aa41.26■■■■■ 4.2
RAB43-208ENST00000615093 BAZ1BQ9UIG0 1483 aaKnown RBP41.21■■■■■ 4.19
RAB43-208ENST00000615093 ERCC6Q03468 1493 aa40.89■■■■■ 4.14
RAB43-208ENST00000615093 NESP48681 1621 aa40.85■■■■■ 4.13
RAB43-208ENST00000615093 WIZO95785 1651 aa40.79■■■■■ 4.12
RAB43-208ENST00000615093 CUX2O14529 1486 aa40.7■■■■■ 4.11
RAB43-208ENST00000615093 LAMC3Q9Y6N6 1575 aa40.68■■■■■ 4.1
RAB43-208ENST00000615093 RSF1Q96T23 1441 aaPredicted RBP40.56■■■■■ 4.08
RAB43-208ENST00000615093 CADPSQ9ULU8 1353 aa40.41■■■■■ 4.06
RAB43-208ENST00000615093 PDS5BQ9NTI5 1447 aa40.39■■■■■ 4.06
RAB43-208ENST00000615093 THOC2Q8NI27 1593 aaKnown RBP40.39■■■■■ 4.06
RAB43-208ENST00000615093 KIF21AQ7Z4S6 1674 aa40.38■■■■■ 4.05
RAB43-208ENST00000615093 TOP2AP11388 1531 aaKnown RBP40.32■■■■■ 4.04
RAB43-208ENST00000615093 DNAJC5Q9H3Z4 198 aa40.14■■■■■ 4.02
RAB43-208ENST00000615093 CFTRP13569 1480 aa40.06■■■■■ 4
RAB43-208ENST00000615093 MRC2Q9UBG0 1479 aa40.02■■■■■ 4
RAB43-208ENST00000615093 CEP164Q9UPV0 1460 aa39.95■■■■□ 3.99
RAB43-208ENST00000615093 FANCD2Q9BXW9 1451 aa39.94■■■■□ 3.98
RAB43-208ENST00000615093 WDR62O43379 1518 aa39.93■■■■□ 3.98
RAB43-208ENST00000615093 CCDC88BA6NC98 1476 aa39.84■■■■□ 3.97
RAB43-208ENST00000615093 PRDM2Q13029 1718 aa39.74■■■■□ 3.95
RAB43-208ENST00000615093 URB2Q14146 1524 aaKnown RBP39.6■■■■□ 3.93
RAB43-208ENST00000615093 TOPBP1Q92547 1522 aa39.25■■■■□ 3.87
RAB43-208ENST00000615093 ABCC8Q09428 1581 aa39.21■■■■□ 3.87
RAB43-208ENST00000615093 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
RAB43-208ENST00000615093 IFT140Q96RY7 1462 aa39.15■■■■□ 3.86
RAB43-208ENST00000615093 SUPT5HO00267 1087 aaKnown RBP39.04■■■■□ 3.84
RAB43-208ENST00000615093 ZNF608Q9ULD9 1512 aaPredicted RBP39.03■■■■□ 3.84
RAB43-208ENST00000615093 TARBP1Q13395 1621 aaKnown RBP38.9■■■■□ 3.82
RAB43-208ENST00000615093 POLA1P09884 1462 aaPredicted RBP38.88■■■■□ 3.81
RAB43-208ENST00000615093 OSCARQ8IYS5 282 aa38.88■■■■□ 3.81
RAB43-208ENST00000615093 EIF4G3O43432 1585 aaKnown RBP38.86■■■■□ 3.81
RAB43-208ENST00000615093 CUX1P39880 1505 aa38.74■■■■□ 3.79
RAB43-208ENST00000615093 AQRO60306 1485 aaKnown RBP eCLIP38.73■■■■□ 3.79
RAB43-208ENST00000615093 RAD54L2Q9Y4B4 1467 aa38.72■■■■□ 3.79
RAB43-208ENST00000615093 SOGA1O94964 1423 aa38.7■■■■□ 3.79
RAB43-208ENST00000615093 FGD5Q6ZNL6 1462 aa38.69■■■■□ 3.78
RAB43-208ENST00000615093 TDRD9Q8NDG6 1382 aaKnown RBP38.55■■■■□ 3.76
RAB43-208ENST00000615093 WDR97A6NE52 1622 aa38.54■■■■□ 3.76
RAB43-208ENST00000615093 TRIM41Q8WV44 630 aa38.53■■■■□ 3.76
RAB43-208ENST00000615093 CHD1O14646 1710 aa38.5■■■■□ 3.75
RAB43-208ENST00000615093 RIMBP3CA6NJZ7 1639 aa38.37■■■■□ 3.73
RAB43-208ENST00000615093 RIMBP3BA6NNM3 1639 aa38.37■■■■□ 3.73
RAB43-208ENST00000615093 RIMBP3Q9UFD9 1639 aa38.37■■■■□ 3.73
RAB43-208ENST00000615093 SNAPC4Q5SXM2 1469 aa38.35■■■■□ 3.73
RAB43-208ENST00000615093 FBLN2P98095 1184 aa38.34■■■■□ 3.73
RAB43-208ENST00000615093 GRIN2BQ13224 1484 aa38.32■■■■□ 3.72
RAB43-208ENST00000615093 ABCA10Q8WWZ4 1543 aa38.3■■■■□ 3.72
RAB43-208ENST00000615093 MAGI1Q96QZ7 1491 aaPredicted RBP38.28■■■■□ 3.72
RAB43-208ENST00000615093 ARHGEF11O15085 1522 aa38.28■■■■□ 3.72
RAB43-208ENST00000615093 BIVM-ERCC5R4GMW8 1640 aa38.27■■■■□ 3.72
RAB43-208ENST00000615093 TOP2BQ02880 1626 aa38.25■■■■□ 3.71
RAB43-208ENST00000615093 GAPVD1Q14C86 1478 aa38.25■■■■□ 3.71
RAB43-208ENST00000615093 WRNQ14191 1432 aaPredicted RBP eCLIP38.24■■■■□ 3.71
RAB43-208ENST00000615093 PBRM1Q86U86 1689 aa38.23■■■■□ 3.71
RAB43-208ENST00000615093 ABCA5Q8WWZ7 1642 aa38.21■■■■□ 3.71
RAB43-208ENST00000615093 SYNJ1O43426 1573 aa38.21■■■■□ 3.71
RAB43-208ENST00000615093 CHMP7Q8WUX9 453 aaPredicted RBP38.16■■■■□ 3.7
RAB43-208ENST00000615093 SYNJ2O15056 1496 aa38.15■■■■□ 3.7
RAB43-208ENST00000615093 CLASP1Q7Z460 1538 aa38.07■■■■□ 3.68
RAB43-208ENST00000615093 ARAP1Q96P48 1450 aa37.93■■■■□ 3.66
RAB43-208ENST00000615093 CYB5RLQ6IPT4 315 aa37.92■■■■□ 3.66
RAB43-208ENST00000615093 ADAMTS12P58397 1594 aa37.89■■■■□ 3.66
RAB43-208ENST00000615093 GRIN2AQ12879 1464 aa37.84■■■■□ 3.65
RAB43-208ENST00000615093 ERICH3Q5RHP9 1530 aa37.82■■■■□ 3.65
RAB43-208ENST00000615093 FHAD1B1AJZ9 1412 aa37.78■■■■□ 3.64
RAB43-208ENST00000615093 NUP160Q12769 1436 aa37.7■■■■□ 3.62
RAB43-208ENST00000615093 CEP170Q5SW79 1584 aa37.68■■■■□ 3.62
RAB43-208ENST00000615093 SHROOM2Q13796 1616 aa37.5■■■■□ 3.59
RAB43-208ENST00000615093 KIF27Q86VH2 1401 aa37.49■■■■□ 3.59
RAB43-208ENST00000615093 ERCC6L2Q5T890 1561 aa37.49■■■■□ 3.59
RAB43-208ENST00000615093 IGF1RP08069 1367 aa37.42■■■■□ 3.58
RAB43-208ENST00000615093 CUL7Q14999 1698 aa37.37■■■■□ 3.57
RAB43-208ENST00000615093 TRHP20396 242 aaPredicted RBP37.35■■■■□ 3.57
RAB43-208ENST00000615093 RUSC2Q8N2Y8 1516 aa37.34■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms