RNA–Protein interactions for RNA: ENST00000615093.1

RAB43-208, Transcript of RAB43, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB43, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-208ENST00000615093 NISCHQ9Y2I1 1504 aa53.55■■■■■ 6.16
RAB43-208ENST00000615093 CCDC180Q9P1Z9 1646 aa47.89■■■■■ 5.26
RAB43-208ENST00000615093 ABCC9O60706 1549 aa47.4■■■■■ 5.18
RAB43-208ENST00000615093 RB1CC1Q8TDY2 1594 aa45.35■■■■■ 4.85
RAB43-208ENST00000615093 NACADO15069 1562 aa45.16■■■■■ 4.82
RAB43-208ENST00000615093 DCAF8L2P0C7V8 631 aa44.92■■■■■ 4.78
RAB43-208ENST00000615093 MYO15BQ96JP2 1530 aa44.7■■■■■ 4.75
RAB43-208ENST00000615093 ZCCHC6Q5VYS8 1495 aaKnown RBP44.47■■■■■ 4.71
RAB43-208ENST00000615093 UNC13AQ9UPW8 1703 aa44.36■■■■■ 4.69
RAB43-208ENST00000615093 DCAF1Q9Y4B6 1507 aa44.29■■■■■ 4.68
RAB43-208ENST00000615093 PABPN1Q86U42 306 aaKnown RBP eCLIP44.17■■■■■ 4.66
RAB43-208ENST00000615093 DNAJC5BQ9UF47 199 aa44.07■■■■■ 4.65
RAB43-208ENST00000615093 BICRAQ9NZM4 1560 aa44.03■■■■■ 4.64
RAB43-208ENST00000615093 SCRIBQ14160 1630 aa43.62■■■■■ 4.57
RAB43-208ENST00000615093 SHROOM4Q9ULL8 1493 aa43.49■■■■■ 4.55
RAB43-208ENST00000615093 EIF4G1Q04637 1599 aaKnown RBP42.89■■■■■ 4.46
RAB43-208ENST00000615093 CC2D2AQ9P2K1 1620 aa42.87■■■■■ 4.45
RAB43-208ENST00000615093 CECR2Q9BXF3 1484 aa42.66■■■■■ 4.42
RAB43-208ENST00000615093 SMARCA4P51532 1647 aa41.69■■■■■ 4.26
RAB43-208ENST00000615093 NCAPD3P42695 1498 aa41.67■■■■■ 4.26
RAB43-208ENST00000615093 ATAD2BQ9ULI0 1458 aa41.6■■■■■ 4.25
RAB43-208ENST00000615093 BAZ1AQ9NRL2 1556 aaPredicted RBP41.54■■■■■ 4.24
RAB43-208ENST00000615093 SMARCA2P51531 1590 aa41.52■■■■■ 4.24
RAB43-208ENST00000615093 HMGXB3Q12766 1538 aa41.42■■■■■ 4.22
RAB43-208ENST00000615093 PEG3Q9GZU2 1588 aa41.29■■■■■ 4.2
RAB43-208ENST00000615093 MROH2BQ7Z745 1585 aa41.26■■■■■ 4.2
RAB43-208ENST00000615093 BAZ1BQ9UIG0 1483 aaKnown RBP41.21■■■■■ 4.19
RAB43-208ENST00000615093 ERCC6Q03468 1493 aa40.89■■■■■ 4.14
RAB43-208ENST00000615093 NESP48681 1621 aa40.85■■■■■ 4.13
RAB43-208ENST00000615093 WIZO95785 1651 aa40.79■■■■■ 4.12
RAB43-208ENST00000615093 CUX2O14529 1486 aa40.7■■■■■ 4.11
RAB43-208ENST00000615093 LAMC3Q9Y6N6 1575 aa40.68■■■■■ 4.1
RAB43-208ENST00000615093 RSF1Q96T23 1441 aaPredicted RBP40.56■■■■■ 4.08
RAB43-208ENST00000615093 CADPSQ9ULU8 1353 aa40.41■■■■■ 4.06
RAB43-208ENST00000615093 PDS5BQ9NTI5 1447 aa40.39■■■■■ 4.06
RAB43-208ENST00000615093 THOC2Q8NI27 1593 aaKnown RBP40.39■■■■■ 4.06
RAB43-208ENST00000615093 KIF21AQ7Z4S6 1674 aa40.38■■■■■ 4.05
RAB43-208ENST00000615093 TOP2AP11388 1531 aaKnown RBP40.32■■■■■ 4.04
RAB43-208ENST00000615093 DNAJC5Q9H3Z4 198 aa40.14■■■■■ 4.02
RAB43-208ENST00000615093 CFTRP13569 1480 aa40.06■■■■■ 4
RAB43-208ENST00000615093 MRC2Q9UBG0 1479 aa40.02■■■■■ 4
RAB43-208ENST00000615093 CEP164Q9UPV0 1460 aa39.95■■■■□ 3.99
RAB43-208ENST00000615093 FANCD2Q9BXW9 1451 aa39.94■■■■□ 3.98
RAB43-208ENST00000615093 WDR62O43379 1518 aa39.93■■■■□ 3.98
RAB43-208ENST00000615093 CCDC88BA6NC98 1476 aa39.84■■■■□ 3.97
RAB43-208ENST00000615093 PRDM2Q13029 1718 aa39.74■■■■□ 3.95
RAB43-208ENST00000615093 URB2Q14146 1524 aaKnown RBP39.6■■■■□ 3.93
RAB43-208ENST00000615093 TOPBP1Q92547 1522 aa39.25■■■■□ 3.87
RAB43-208ENST00000615093 ABCC8Q09428 1581 aa39.21■■■■□ 3.87
RAB43-208ENST00000615093 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
RAB43-208ENST00000615093 IFT140Q96RY7 1462 aa39.15■■■■□ 3.86
RAB43-208ENST00000615093 SUPT5HO00267 1087 aaKnown RBP39.04■■■■□ 3.84
RAB43-208ENST00000615093 ZNF608Q9ULD9 1512 aaPredicted RBP39.03■■■■□ 3.84
RAB43-208ENST00000615093 TARBP1Q13395 1621 aaKnown RBP38.9■■■■□ 3.82
RAB43-208ENST00000615093 POLA1P09884 1462 aaPredicted RBP38.88■■■■□ 3.81
RAB43-208ENST00000615093 OSCARQ8IYS5 282 aa38.88■■■■□ 3.81
RAB43-208ENST00000615093 EIF4G3O43432 1585 aaKnown RBP38.86■■■■□ 3.81
RAB43-208ENST00000615093 CUX1P39880 1505 aa38.74■■■■□ 3.79
RAB43-208ENST00000615093 AQRO60306 1485 aaKnown RBP eCLIP38.73■■■■□ 3.79
RAB43-208ENST00000615093 RAD54L2Q9Y4B4 1467 aa38.72■■■■□ 3.79
RAB43-208ENST00000615093 SOGA1O94964 1423 aa38.7■■■■□ 3.79
RAB43-208ENST00000615093 FGD5Q6ZNL6 1462 aa38.69■■■■□ 3.78
RAB43-208ENST00000615093 TDRD9Q8NDG6 1382 aaKnown RBP38.55■■■■□ 3.76
RAB43-208ENST00000615093 WDR97A6NE52 1622 aa38.54■■■■□ 3.76
RAB43-208ENST00000615093 TRIM41Q8WV44 630 aa38.53■■■■□ 3.76
RAB43-208ENST00000615093 CHD1O14646 1710 aa38.5■■■■□ 3.75
RAB43-208ENST00000615093 RIMBP3CA6NJZ7 1639 aa38.37■■■■□ 3.73
RAB43-208ENST00000615093 RIMBP3BA6NNM3 1639 aa38.37■■■■□ 3.73
RAB43-208ENST00000615093 RIMBP3Q9UFD9 1639 aa38.37■■■■□ 3.73
RAB43-208ENST00000615093 SNAPC4Q5SXM2 1469 aa38.35■■■■□ 3.73
RAB43-208ENST00000615093 FBLN2P98095 1184 aa38.34■■■■□ 3.73
RAB43-208ENST00000615093 GRIN2BQ13224 1484 aa38.32■■■■□ 3.72
RAB43-208ENST00000615093 ABCA10Q8WWZ4 1543 aa38.3■■■■□ 3.72
RAB43-208ENST00000615093 MAGI1Q96QZ7 1491 aaPredicted RBP38.28■■■■□ 3.72
RAB43-208ENST00000615093 ARHGEF11O15085 1522 aa38.28■■■■□ 3.72
RAB43-208ENST00000615093 BIVM-ERCC5R4GMW8 1640 aa38.27■■■■□ 3.72
RAB43-208ENST00000615093 TOP2BQ02880 1626 aa38.25■■■■□ 3.71
RAB43-208ENST00000615093 GAPVD1Q14C86 1478 aa38.25■■■■□ 3.71
RAB43-208ENST00000615093 WRNQ14191 1432 aaPredicted RBP eCLIP38.24■■■■□ 3.71
RAB43-208ENST00000615093 PBRM1Q86U86 1689 aa38.23■■■■□ 3.71
RAB43-208ENST00000615093 ABCA5Q8WWZ7 1642 aa38.21■■■■□ 3.71
RAB43-208ENST00000615093 SYNJ1O43426 1573 aa38.21■■■■□ 3.71
RAB43-208ENST00000615093 CHMP7Q8WUX9 453 aaPredicted RBP38.16■■■■□ 3.7
RAB43-208ENST00000615093 SYNJ2O15056 1496 aa38.15■■■■□ 3.7
RAB43-208ENST00000615093 CLASP1Q7Z460 1538 aa38.07■■■■□ 3.68
RAB43-208ENST00000615093 ARAP1Q96P48 1450 aa37.93■■■■□ 3.66
RAB43-208ENST00000615093 CYB5RLQ6IPT4 315 aa37.92■■■■□ 3.66
RAB43-208ENST00000615093 ADAMTS12P58397 1594 aa37.89■■■■□ 3.66
RAB43-208ENST00000615093 GRIN2AQ12879 1464 aa37.84■■■■□ 3.65
RAB43-208ENST00000615093 ERICH3Q5RHP9 1530 aa37.82■■■■□ 3.65
RAB43-208ENST00000615093 FHAD1B1AJZ9 1412 aa37.78■■■■□ 3.64
RAB43-208ENST00000615093 NUP160Q12769 1436 aa37.7■■■■□ 3.62
RAB43-208ENST00000615093 CEP170Q5SW79 1584 aa37.68■■■■□ 3.62
RAB43-208ENST00000615093 SHROOM2Q13796 1616 aa37.5■■■■□ 3.59
RAB43-208ENST00000615093 KIF27Q86VH2 1401 aa37.49■■■■□ 3.59
RAB43-208ENST00000615093 ERCC6L2Q5T890 1561 aa37.49■■■■□ 3.59
RAB43-208ENST00000615093 IGF1RP08069 1367 aa37.42■■■■□ 3.58
RAB43-208ENST00000615093 CUL7Q14999 1698 aa37.37■■■■□ 3.57
RAB43-208ENST00000615093 TRHP20396 242 aaPredicted RBP37.35■■■■□ 3.57
RAB43-208ENST00000615093 RUSC2Q8N2Y8 1516 aa37.34■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms