RNA–Protein interactions for RNA: ENST00000531319.1

AP004608.1-201, humanhuman

TSL 2 BASIC

Gene AP004608.1, Length 1,402 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-201ENST00000531319 NISCHQ9Y2I1 1504 aa51.68■■■■■ 5.86
AP004608.1-201ENST00000531319 CCDC180Q9P1Z9 1646 aa45.79■■■■■ 4.92
AP004608.1-201ENST00000531319 ABCC9O60706 1549 aa44.55■■■■■ 4.72
AP004608.1-201ENST00000531319 ZCCHC6Q5VYS8 1495 aaKnown RBP43.13■■■■■ 4.5
AP004608.1-201ENST00000531319 NACADO15069 1562 aa42.95■■■■■ 4.47
AP004608.1-201ENST00000531319 RB1CC1Q8TDY2 1594 aa42.92■■■■■ 4.46
AP004608.1-201ENST00000531319 DCAF8L2P0C7V8 631 aa42.9■■■■■ 4.46
AP004608.1-201ENST00000531319 MYO15BQ96JP2 1530 aa42.81■■■■■ 4.44
AP004608.1-201ENST00000531319 DCAF1Q9Y4B6 1507 aa42.75■■■■■ 4.43
AP004608.1-201ENST00000531319 UNC13AQ9UPW8 1703 aa42.05■■■■■ 4.32
AP004608.1-201ENST00000531319 SCRIBQ14160 1630 aa41.83■■■■■ 4.29
AP004608.1-201ENST00000531319 BICRAQ9NZM4 1560 aa41.76■■■■■ 4.28
AP004608.1-201ENST00000531319 PABPN1Q86U42 306 aaKnown RBP eCLIP41.66■■■■■ 4.26
AP004608.1-201ENST00000531319 SHROOM4Q9ULL8 1493 aa41.21■■■■■ 4.19
AP004608.1-201ENST00000531319 DNAJC5BQ9UF47 199 aa40.72■■■■■ 4.11
AP004608.1-201ENST00000531319 EIF4G1Q04637 1599 aaKnown RBP40.56■■■■■ 4.08
AP004608.1-201ENST00000531319 CC2D2AQ9P2K1 1620 aa40.32■■■■■ 4.05
AP004608.1-201ENST00000531319 CECR2Q9BXF3 1484 aa40.28■■■■■ 4.04
AP004608.1-201ENST00000531319 SMARCA4P51532 1647 aa40.04■■■■■ 4
AP004608.1-201ENST00000531319 BAZ1AQ9NRL2 1556 aaPredicted RBP39.98■■■■□ 3.99
AP004608.1-201ENST00000531319 MROH2BQ7Z745 1585 aa39.87■■■■□ 3.97
AP004608.1-201ENST00000531319 ATAD2BQ9ULI0 1458 aa39.75■■■■□ 3.95
AP004608.1-201ENST00000531319 NCAPD3P42695 1498 aa39.67■■■■□ 3.94
AP004608.1-201ENST00000531319 PEG3Q9GZU2 1588 aa39.66■■■■□ 3.94
AP004608.1-201ENST00000531319 SMARCA2P51531 1590 aa39.65■■■■□ 3.94
AP004608.1-201ENST00000531319 HMGXB3Q12766 1538 aa39.51■■■■□ 3.91
AP004608.1-201ENST00000531319 RSF1Q96T23 1441 aaPredicted RBP39.49■■■■□ 3.91
AP004608.1-201ENST00000531319 WIZO95785 1651 aa39.44■■■■□ 3.9
AP004608.1-201ENST00000531319 BAZ1BQ9UIG0 1483 aaKnown RBP39.39■■■■□ 3.9
AP004608.1-201ENST00000531319 TOP2AP11388 1531 aaKnown RBP39.01■■■■□ 3.84
AP004608.1-201ENST00000531319 NESP48681 1621 aa38.69■■■■□ 3.78
AP004608.1-201ENST00000531319 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
AP004608.1-201ENST00000531319 CCDC88BA6NC98 1476 aa38.56■■■■□ 3.76
AP004608.1-201ENST00000531319 LAMC3Q9Y6N6 1575 aa38.54■■■■□ 3.76
AP004608.1-201ENST00000531319 CADPSQ9ULU8 1353 aa38.5■■■■□ 3.75
AP004608.1-201ENST00000531319 CFTRP13569 1480 aa38.37■■■■□ 3.73
AP004608.1-201ENST00000531319 ERCC6Q03468 1493 aa38.28■■■■□ 3.72
AP004608.1-201ENST00000531319 PDS5BQ9NTI5 1447 aa38.22■■■■□ 3.71
AP004608.1-201ENST00000531319 KIF21AQ7Z4S6 1674 aa38.21■■■■□ 3.71
AP004608.1-201ENST00000531319 FANCD2Q9BXW9 1451 aa38.08■■■■□ 3.69
AP004608.1-201ENST00000531319 PRDM2Q13029 1718 aa38.07■■■■□ 3.69
AP004608.1-201ENST00000531319 THOC2Q8NI27 1593 aaKnown RBP38.05■■■■□ 3.68
AP004608.1-201ENST00000531319 CEP164Q9UPV0 1460 aa37.97■■■■□ 3.67
AP004608.1-201ENST00000531319 MRC2Q9UBG0 1479 aa37.88■■■■□ 3.65
AP004608.1-201ENST00000531319 CUX2O14529 1486 aa37.82■■■■□ 3.64
AP004608.1-201ENST00000531319 WDR62O43379 1518 aa37.78■■■■□ 3.64
AP004608.1-201ENST00000531319 URB2Q14146 1524 aaKnown RBP37.74■■■■□ 3.63
AP004608.1-201ENST00000531319 TOPBP1Q92547 1522 aa37.52■■■■□ 3.6
AP004608.1-201ENST00000531319 DNMBPQ6XZF7 1577 aa37.48■■■■□ 3.59
AP004608.1-201ENST00000531319 ABCC8Q09428 1581 aa37.42■■■■□ 3.58
AP004608.1-201ENST00000531319 CUX1P39880 1505 aa37.38■■■■□ 3.57
AP004608.1-201ENST00000531319 POLA1P09884 1462 aaPredicted RBP37.23■■■■□ 3.55
AP004608.1-201ENST00000531319 FGD5Q6ZNL6 1462 aa37.17■■■■□ 3.54
AP004608.1-201ENST00000531319 IFT140Q96RY7 1462 aa37.16■■■■□ 3.54
AP004608.1-201ENST00000531319 WRNQ14191 1432 aaPredicted RBP eCLIP37.16■■■■□ 3.54
AP004608.1-201ENST00000531319 SYNJ1O43426 1573 aa37.15■■■■□ 3.54
AP004608.1-201ENST00000531319 TARBP1Q13395 1621 aaKnown RBP37.13■■■■□ 3.53
AP004608.1-201ENST00000531319 BIVM-ERCC5R4GMW8 1640 aa37.1■■■■□ 3.53
AP004608.1-201ENST00000531319 TOP2BQ02880 1626 aa37.1■■■■□ 3.53
AP004608.1-201ENST00000531319 RAD54L2Q9Y4B4 1467 aa37.08■■■■□ 3.53
AP004608.1-201ENST00000531319 ZNF608Q9ULD9 1512 aaPredicted RBP37.07■■■■□ 3.52
AP004608.1-201ENST00000531319 SOGA1O94964 1423 aa37.02■■■■□ 3.52
AP004608.1-201ENST00000531319 EIF4G3O43432 1585 aaKnown RBP36.91■■■■□ 3.5
AP004608.1-201ENST00000531319 WDR97A6NE52 1622 aa36.91■■■■□ 3.5
AP004608.1-201ENST00000531319 AQRO60306 1485 aaKnown RBP eCLIP36.85■■■■□ 3.49
AP004608.1-201ENST00000531319 TDRD9Q8NDG6 1382 aaKnown RBP36.81■■■■□ 3.48
AP004608.1-201ENST00000531319 ABCA10Q8WWZ4 1543 aa36.81■■■■□ 3.48
AP004608.1-201ENST00000531319 ABCA5Q8WWZ7 1642 aa36.69■■■■□ 3.46
AP004608.1-201ENST00000531319 GAPVD1Q14C86 1478 aa36.61■■■■□ 3.45
AP004608.1-201ENST00000531319 GRIN2BQ13224 1484 aa36.56■■■■□ 3.44
AP004608.1-201ENST00000531319 PBRM1Q86U86 1689 aa36.55■■■■□ 3.44
AP004608.1-201ENST00000531319 SNAPC4Q5SXM2 1469 aa36.51■■■■□ 3.43
AP004608.1-201ENST00000531319 MAGI1Q96QZ7 1491 aaPredicted RBP36.43■■■■□ 3.42
AP004608.1-201ENST00000531319 TRIM41Q8WV44 630 aa36.4■■■■□ 3.42
AP004608.1-201ENST00000531319 CHD1O14646 1710 aa36.37■■■■□ 3.41
AP004608.1-201ENST00000531319 ERICH3Q5RHP9 1530 aa36.36■■■■□ 3.41
AP004608.1-201ENST00000531319 DNAJC5Q9H3Z4 198 aa36.34■■■■□ 3.41
AP004608.1-201ENST00000531319 KIF27Q86VH2 1401 aa36.33■■■■□ 3.41
AP004608.1-201ENST00000531319 SYNJ2O15056 1496 aa36.3■■■■□ 3.4
AP004608.1-201ENST00000531319 ADAMTS12P58397 1594 aa36.3■■■■□ 3.4
AP004608.1-201ENST00000531319 CHIC1Q5VXU3 224 aa36.25■■■■□ 3.39
AP004608.1-201ENST00000531319 OSCARQ8IYS5 282 aa36.24■■■■□ 3.39
AP004608.1-201ENST00000531319 RUSC2Q8N2Y8 1516 aa36.23■■■■□ 3.39
AP004608.1-201ENST00000531319 FBLN2P98095 1184 aa36.23■■■■□ 3.39
AP004608.1-201ENST00000531319 IGF1RP08069 1367 aa36.22■■■■□ 3.39
AP004608.1-201ENST00000531319 FHAD1B1AJZ9 1412 aa36.19■■■■□ 3.38
AP004608.1-201ENST00000531319 CHMP7Q8WUX9 453 aaPredicted RBP36.17■■■■□ 3.38
AP004608.1-201ENST00000531319 GRIN2AQ12879 1464 aa36.13■■■■□ 3.37
AP004608.1-201ENST00000531319 CUL7Q14999 1698 aa36.06■■■■□ 3.36
AP004608.1-201ENST00000531319 CLASP1Q7Z460 1538 aa36.02■■■■□ 3.36
AP004608.1-201ENST00000531319 CEP170Q5SW79 1584 aa35.98■■■■□ 3.35
AP004608.1-201ENST00000531319 NUP160Q12769 1436 aa35.97■■■■□ 3.35
AP004608.1-201ENST00000531319 CARMIL1Q5VZK9 1371 aa35.96■■■■□ 3.35
AP004608.1-201ENST00000531319 PRXQ9BXM0 1461 aa35.79■■■■□ 3.32
AP004608.1-201ENST00000531319 EEA1Q15075 1411 aa35.79■■■■□ 3.32
AP004608.1-201ENST00000531319 RAPGEF2Q9Y4G8 1499 aa35.78■■■■□ 3.32
AP004608.1-201ENST00000531319 ARHGEF11O15085 1522 aa35.77■■■■□ 3.32
AP004608.1-201ENST00000531319 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
AP004608.1-201ENST00000531319 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
AP004608.1-201ENST00000531319 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms