RNA–Protein interactions for RNA: ENST00000420504.2

TMEM200B-201, Transcript of transmembrane protein 200B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200B, Length 2,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200B-201ENST00000420504 NISCHQ9Y2I1 1504 aa44.64■■■■■ 4.74
TMEM200B-201ENST00000420504 SHROOM4Q9ULL8 1493 aa37.99■■■■□ 3.67
TMEM200B-201ENST00000420504 CCDC180Q9P1Z9 1646 aa37.96■■■■□ 3.67
TMEM200B-201ENST00000420504 ZCCHC6Q5VYS8 1495 aaKnown RBP37.82■■■■□ 3.65
TMEM200B-201ENST00000420504 SUPT5HO00267 1087 aaKnown RBP37.31■■■■□ 3.56
TMEM200B-201ENST00000420504 DCAF1Q9Y4B6 1507 aa36.7■■■■□ 3.47
TMEM200B-201ENST00000420504 DCAF8L2P0C7V8 631 aa36.67■■■■□ 3.46
TMEM200B-201ENST00000420504 CHIC1Q5VXU3 224 aa36.48■■■■□ 3.43
TMEM200B-201ENST00000420504 MYO15BQ96JP2 1530 aa36.45■■■■□ 3.42
TMEM200B-201ENST00000420504 ABCC9O60706 1549 aa35.75■■■■□ 3.31
TMEM200B-201ENST00000420504 HRCP23327 699 aa35.67■■■■□ 3.3
TMEM200B-201ENST00000420504 SCRIBQ14160 1630 aa35.48■■■■□ 3.27
TMEM200B-201ENST00000420504 PCGF6Q9BYE7 350 aa35.45■■■■□ 3.27
TMEM200B-201ENST00000420504 RSF1Q96T23 1441 aaPredicted RBP35.37■■■■□ 3.25
TMEM200B-201ENST00000420504 LOC105371045A0A1W2PR82 267 aa35.34■■■■□ 3.25
TMEM200B-201ENST00000420504 RB1CC1Q8TDY2 1594 aa35.05■■■■□ 3.2
TMEM200B-201ENST00000420504 NACADO15069 1562 aa34.99■■■■□ 3.19
TMEM200B-201ENST00000420504 PPARGC1BQ86YN6 1023 aaKnown RBP34.9■■■■□ 3.18
TMEM200B-201ENST00000420504 TRIM26Q12899 539 aaPredicted RBP34.8■■■■□ 3.16
TMEM200B-201ENST00000420504 TRIM41Q8WV44 630 aa34.79■■■■□ 3.16
TMEM200B-201ENST00000420504 CECR2Q9BXF3 1484 aa34.76■■■■□ 3.16
TMEM200B-201ENST00000420504 MROH2BQ7Z745 1585 aa34.69■■■■□ 3.14
TMEM200B-201ENST00000420504 WIZO95785 1651 aa34.53■■■■□ 3.12
TMEM200B-201ENST00000420504 FAM9AQ8IZU1 332 aaPredicted RBP34.44■■■■□ 3.1
TMEM200B-201ENST00000420504 BAZ1AQ9NRL2 1556 aaPredicted RBP34.38■■■■□ 3.09
TMEM200B-201ENST00000420504 EIF4G1Q04637 1599 aaKnown RBP34.25■■■■□ 3.07
TMEM200B-201ENST00000420504 ZEB1P37275 1124 aaPredicted RBP34.12■■■■□ 3.05
TMEM200B-201ENST00000420504 EHMT2Q96KQ7 1210 aa34.07■■■■□ 3.04
TMEM200B-201ENST00000420504 TOP2AP11388 1531 aaKnown RBP34.01■■■■□ 3.04
TMEM200B-201ENST00000420504 SMARCA4P51532 1647 aa33.98■■■■□ 3.03
TMEM200B-201ENST00000420504 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
TMEM200B-201ENST00000420504 SMARCA2P51531 1590 aa33.84■■■■□ 3.01
TMEM200B-201ENST00000420504 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
TMEM200B-201ENST00000420504 ABCC8Q09428 1581 aa33.79■■■■□ 3
TMEM200B-201ENST00000420504 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.96
TMEM200B-201ENST00000420504 SOGA1O94964 1423 aa33.48■■■□□ 2.95
TMEM200B-201ENST00000420504 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
TMEM200B-201ENST00000420504 CEP162Q5TB80 1403 aa33.43■■■□□ 2.94
TMEM200B-201ENST00000420504 EEA1Q15075 1411 aa33.4■■■□□ 2.94
TMEM200B-201ENST00000420504 TNIKQ9UKE5 1360 aa33.38■■■□□ 2.93
TMEM200B-201ENST00000420504 PEG3Q9GZU2 1588 aa33.38■■■□□ 2.93
TMEM200B-201ENST00000420504 RUSC2Q8N2Y8 1516 aa33.32■■■□□ 2.92
TMEM200B-201ENST00000420504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.32■■■□□ 2.92
TMEM200B-201ENST00000420504 CSRNP3Q8WYN3 585 aa33.28■■■□□ 2.92
TMEM200B-201ENST00000420504 PABPN1Q86U42 306 aaKnown RBP eCLIP33.27■■■□□ 2.92
TMEM200B-201ENST00000420504 CCER1Q8TC90 406 aaPredicted RBP33.23■■■□□ 2.91
TMEM200B-201ENST00000420504 GOLGA3Q08378 1498 aa33.16■■■□□ 2.9
TMEM200B-201ENST00000420504 SYNJ1O43426 1573 aa33.08■■■□□ 2.89
TMEM200B-201ENST00000420504 UBTFP17480 764 aaKnown RBP33.08■■■□□ 2.89
TMEM200B-201ENST00000420504 SCAF1Q9H7N4 1312 aaKnown RBP33.05■■■□□ 2.88
TMEM200B-201ENST00000420504 TTBK1Q5TCY1 1321 aaPredicted RBP33.04■■■□□ 2.88
TMEM200B-201ENST00000420504 ATAD2BQ9ULI0 1458 aa33.02■■■□□ 2.88
TMEM200B-201ENST00000420504 KIF21BO75037 1637 aa32.99■■■□□ 2.87
TMEM200B-201ENST00000420504 CEP164Q9UPV0 1460 aa32.96■■■□□ 2.87
TMEM200B-201ENST00000420504 BAZ1BQ9UIG0 1483 aaKnown RBP32.92■■■□□ 2.86
TMEM200B-201ENST00000420504 CLIP1P30622 1438 aa32.76■■■□□ 2.83
TMEM200B-201ENST00000420504 DIEXFQ68CQ4 756 aaKnown RBP32.7■■■□□ 2.83
TMEM200B-201ENST00000420504 RAPGEF2Q9Y4G8 1499 aa32.68■■■□□ 2.82
TMEM200B-201ENST00000420504 TOP2BQ02880 1626 aa32.68■■■□□ 2.82
TMEM200B-201ENST00000420504 VPS8Q8N3P4 1428 aa32.68■■■□□ 2.82
TMEM200B-201ENST00000420504 BIVM-ERCC5R4GMW8 1640 aa32.59■■■□□ 2.81
TMEM200B-201ENST00000420504 ACIN1Q9UKV3 1341 aaKnown RBP32.58■■■□□ 2.81
TMEM200B-201ENST00000420504 NEUROD1Q13562 356 aa32.55■■■□□ 2.8
TMEM200B-201ENST00000420504 PELP1Q8IZL8 1130 aaKnown RBP32.55■■■□□ 2.8
TMEM200B-201ENST00000420504 ZNF316A6NFI3 1004 aaPredicted RBP32.45■■■□□ 2.78
TMEM200B-201ENST00000420504 HNRNPUL2Q1KMD3 747 aaKnown RBP32.45■■■□□ 2.78
TMEM200B-201ENST00000420504 ERICH3Q5RHP9 1530 aa32.43■■■□□ 2.78
TMEM200B-201ENST00000420504 HMGXB3Q12766 1538 aa32.41■■■□□ 2.78
TMEM200B-201ENST00000420504 PRXQ9BXM0 1461 aa32.39■■■□□ 2.78
TMEM200B-201ENST00000420504 APLP2Q06481 763 aa32.37■■■□□ 2.77
TMEM200B-201ENST00000420504 NCAPD3P42695 1498 aa32.37■■■□□ 2.77
TMEM200B-201ENST00000420504 CENPBP07199 599 aaPredicted RBP32.33■■■□□ 2.77
TMEM200B-201ENST00000420504 CUX1P39880 1505 aa32.29■■■□□ 2.76
TMEM200B-201ENST00000420504 RANGAP1P46060 587 aaPredicted RBP32.28■■■□□ 2.76
TMEM200B-201ENST00000420504 ARAP1Q96P48 1450 aa32.26■■■□□ 2.76
TMEM200B-201ENST00000420504 GTF3C3Q9Y5Q9 886 aa32.23■■■□□ 2.75
TMEM200B-201ENST00000420504 CFTRP13569 1480 aa32.16■■■□□ 2.74
TMEM200B-201ENST00000420504 KIF27Q86VH2 1401 aa32.14■■■□□ 2.74
TMEM200B-201ENST00000420504 KANK4Q5T7N3 995 aaPredicted RBP32.03■■■□□ 2.72
TMEM200B-201ENST00000420504 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
TMEM200B-201ENST00000420504 CLSPNQ9HAW4 1339 aa32■■■□□ 2.71
TMEM200B-201ENST00000420504 MIER1Q8N108 512 aa31.99■■■□□ 2.71
TMEM200B-201ENST00000420504 DHX57Q6P158 1386 aaKnown RBP31.98■■■□□ 2.71
TMEM200B-201ENST00000420504 RRBP1Q9P2E9 1410 aaKnown RBP31.97■■■□□ 2.71
TMEM200B-201ENST00000420504 ARHGAP35Q9NRY4 1499 aa31.95■■■□□ 2.71
TMEM200B-201ENST00000420504 YTHDC1Q96MU7 727 aaKnown RBP31.92■■■□□ 2.7
TMEM200B-201ENST00000420504 CUX2O14529 1486 aa31.84■■■□□ 2.69
TMEM200B-201ENST00000420504 IGF1RP08069 1367 aa31.78■■■□□ 2.68
TMEM200B-201ENST00000420504 CCNB3Q8WWL7 1395 aa31.77■■■□□ 2.68
TMEM200B-201ENST00000420504 CADPSQ9ULU8 1353 aa31.72■■■□□ 2.67
TMEM200B-201ENST00000420504 MAP3K1Q13233 1512 aa31.67■■■□□ 2.66
TMEM200B-201ENST00000420504 FGD5Q6ZNL6 1462 aa31.66■■■□□ 2.66
TMEM200B-201ENST00000420504 TIAM1Q13009 1591 aa31.66■■■□□ 2.66
TMEM200B-201ENST00000420504 CARMIL1Q5VZK9 1371 aa31.63■■■□□ 2.65
TMEM200B-201ENST00000420504 LRRC9Q6ZRR7 1453 aa31.51■■■□□ 2.63
TMEM200B-201ENST00000420504 RAB3GAP2Q9H2M9 1393 aa31.49■■■□□ 2.63
TMEM200B-201ENST00000420504 ITGAEP38570 1179 aa31.48■■■□□ 2.63
TMEM200B-201ENST00000420504 MAPKBP1O60336 1514 aa31.47■■■□□ 2.63
TMEM200B-201ENST00000420504 CFAP43Q8NDM7 1665 aa31.46■■■□□ 2.63
TMEM200B-201ENST00000420504 CC2D2AQ9P2K1 1620 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms