Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHGA4Q9Y5G9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHGA4Q9Y5G9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHGA4Q9Y5G9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDHGA4Q9Y5G9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA4Q9Y5G9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA4Q9Y5G9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA4Q9Y5G9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA4Q9Y5G9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHGA4Q9Y5G9 AL391121.1-201ENST00000607967 1349 ntBASIC26.49■■□□□ 1.83
PCDHGA4Q9Y5G9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHGA4Q9Y5G9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHGA4Q9Y5G9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGA4Q9Y5G9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHGA4Q9Y5G9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.45■■□□□ 1.83
PCDHGA4Q9Y5G9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGA4Q9Y5G9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGA4Q9Y5G9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGA4Q9Y5G9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
PCDHGA4Q9Y5G9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.42■■□□□ 1.82
PCDHGA4Q9Y5G9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
PCDHGA4Q9Y5G9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGA4Q9Y5G9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGA4Q9Y5G9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA4Q9Y5G9 AL133380.1-201ENST00000506013 324 ntBASIC26.39■■□□□ 1.82
PCDHGA4Q9Y5G9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.39■■□□□ 1.82
PCDHGA4Q9Y5G9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA4Q9Y5G9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGA4Q9Y5G9 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.37■■□□□ 1.81
PCDHGA4Q9Y5G9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA4Q9Y5G9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA4Q9Y5G9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA4Q9Y5G9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA4Q9Y5G9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA4Q9Y5G9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHGA4Q9Y5G9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA4Q9Y5G9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
PCDHGA4Q9Y5G9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA4Q9Y5G9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA4Q9Y5G9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.29■■□□□ 1.8
PCDHGA4Q9Y5G9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGA4Q9Y5G9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHGA4Q9Y5G9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.27■■□□□ 1.8
PCDHGA4Q9Y5G9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA4Q9Y5G9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PCDHGA4Q9Y5G9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA4Q9Y5G9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA4Q9Y5G9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHGA4Q9Y5G9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGA4Q9Y5G9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.25■■□□□ 1.79
PCDHGA4Q9Y5G9 MIR3665-201ENST00000578708 105 ntBASIC26.25■■□□□ 1.79
PCDHGA4Q9Y5G9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGA4Q9Y5G9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA4Q9Y5G9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA4Q9Y5G9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHGA4Q9Y5G9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
PCDHGA4Q9Y5G9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDHGA4Q9Y5G9 AC120057.4-201ENST00000624722 1615 ntBASIC26.22■■□□□ 1.79
PCDHGA4Q9Y5G9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA4Q9Y5G9 MIR7108-201ENST00000614319 87 ntBASIC26.22■■□□□ 1.79
PCDHGA4Q9Y5G9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHGA4Q9Y5G9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.2■■□□□ 1.79
PCDHGA4Q9Y5G9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
PCDHGA4Q9Y5G9 ABHD17AP4-201ENST00000411545 909 ntBASIC26.2■■□□□ 1.78
PCDHGA4Q9Y5G9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.2■■□□□ 1.78
PCDHGA4Q9Y5G9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGA4Q9Y5G9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
PCDHGA4Q9Y5G9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHGA4Q9Y5G9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGA4Q9Y5G9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGA4Q9Y5G9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGA4Q9Y5G9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGA4Q9Y5G9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGA4Q9Y5G9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGA4Q9Y5G9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA4Q9Y5G9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA4Q9Y5G9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA4Q9Y5G9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHGA4Q9Y5G9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHGA4Q9Y5G9 AC087741.3-201ENST00000624270 1347 ntBASIC26.14■■□□□ 1.77
PCDHGA4Q9Y5G9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGA4Q9Y5G9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGA4Q9Y5G9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDHGA4Q9Y5G9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGA4Q9Y5G9 DUX4L28-201ENST00000623687 678 ntBASIC26.11■■□□□ 1.77
PCDHGA4Q9Y5G9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.1■■□□□ 1.77
PCDHGA4Q9Y5G9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA4Q9Y5G9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHGA4Q9Y5G9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
PCDHGA4Q9Y5G9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.76
PCDHGA4Q9Y5G9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGA4Q9Y5G9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGA4Q9Y5G9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGA4Q9Y5G9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
PCDHGA4Q9Y5G9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGA4Q9Y5G9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
PCDHGA4Q9Y5G9 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.06■■□□□ 1.76
PCDHGA4Q9Y5G9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA4Q9Y5G9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
PCDHGA4Q9Y5G9 AC044849.2-201ENST00000606596 710 ntBASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms