Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.7■□□□□ 0.9
MS4A6AQ9H2W1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A6AQ9H2W1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A6AQ9H2W1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.68■□□□□ 0.9
MS4A6AQ9H2W1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A6AQ9H2W1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A6AQ9H2W1 AC120057.4-201ENST00000624722 1615 ntBASIC20.67■□□□□ 0.9
MS4A6AQ9H2W1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MS4A6AQ9H2W1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.67■□□□□ 0.9
MS4A6AQ9H2W1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A6AQ9H2W1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A6AQ9H2W1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A6AQ9H2W1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A6AQ9H2W1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A6AQ9H2W1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A6AQ9H2W1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A6AQ9H2W1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A6AQ9H2W1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.63■□□□□ 0.89
MS4A6AQ9H2W1 AC139426.1-201ENST00000568218 2529 ntBASIC20.63■□□□□ 0.89
MS4A6AQ9H2W1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A6AQ9H2W1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A6AQ9H2W1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A6AQ9H2W1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A6AQ9H2W1 RARRES2P7-201ENST00000567349 469 ntBASIC20.6■□□□□ 0.89
MS4A6AQ9H2W1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A6AQ9H2W1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A6AQ9H2W1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A6AQ9H2W1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A6AQ9H2W1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A6AQ9H2W1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A6AQ9H2W1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.56■□□□□ 0.88
MS4A6AQ9H2W1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A6AQ9H2W1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MS4A6AQ9H2W1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A6AQ9H2W1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A6AQ9H2W1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A6AQ9H2W1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A6AQ9H2W1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.53■□□□□ 0.88
MS4A6AQ9H2W1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A6AQ9H2W1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A6AQ9H2W1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.52■□□□□ 0.87
MS4A6AQ9H2W1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A6AQ9H2W1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
MS4A6AQ9H2W1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.49■□□□□ 0.87
MS4A6AQ9H2W1 AL133380.1-201ENST00000506013 324 ntBASIC20.49■□□□□ 0.87
MS4A6AQ9H2W1 SETD8P1-201ENST00000623146 1180 ntBASIC20.49■□□□□ 0.87
MS4A6AQ9H2W1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A6AQ9H2W1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A6AQ9H2W1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A6AQ9H2W1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A6AQ9H2W1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A6AQ9H2W1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
MS4A6AQ9H2W1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A6AQ9H2W1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A6AQ9H2W1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A6AQ9H2W1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A6AQ9H2W1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A6AQ9H2W1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A6AQ9H2W1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A6AQ9H2W1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MS4A6AQ9H2W1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
MS4A6AQ9H2W1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MS4A6AQ9H2W1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MS4A6AQ9H2W1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MS4A6AQ9H2W1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
MS4A6AQ9H2W1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MS4A6AQ9H2W1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MS4A6AQ9H2W1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
MS4A6AQ9H2W1 WASH5P-204ENST00000632292 975 ntBASIC20.37■□□□□ 0.85
MS4A6AQ9H2W1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.37■□□□□ 0.85
MS4A6AQ9H2W1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MS4A6AQ9H2W1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MS4A6AQ9H2W1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MS4A6AQ9H2W1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
MS4A6AQ9H2W1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.35■□□□□ 0.85
MS4A6AQ9H2W1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MS4A6AQ9H2W1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MS4A6AQ9H2W1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MS4A6AQ9H2W1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MS4A6AQ9H2W1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.34■□□□□ 0.85
MS4A6AQ9H2W1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.34■□□□□ 0.85
MS4A6AQ9H2W1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MS4A6AQ9H2W1 AC097358.2-201ENST00000607541 1159 ntBASIC20.33■□□□□ 0.85
MS4A6AQ9H2W1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MS4A6AQ9H2W1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.33■□□□□ 0.84
MS4A6AQ9H2W1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A6AQ9H2W1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MS4A6AQ9H2W1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A6AQ9H2W1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A6AQ9H2W1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
MS4A6AQ9H2W1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A6AQ9H2W1 AC136428.2-201ENST00000563187 214 ntBASIC20.3■□□□□ 0.84
MS4A6AQ9H2W1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.3■□□□□ 0.84
MS4A6AQ9H2W1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A6AQ9H2W1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
MS4A6AQ9H2W1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A6AQ9H2W1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A6AQ9H2W1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MS4A6AQ9H2W1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A6AQ9H2W1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms