Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.12■■■■□ 3.37
PCDH11XQ9BZA7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
PCDH11XQ9BZA7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
PCDH11XQ9BZA7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
PCDH11XQ9BZA7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC36.09■■■■□ 3.37
PCDH11XQ9BZA7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC36.08■■■■□ 3.37
PCDH11XQ9BZA7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
PCDH11XQ9BZA7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC36.08■■■■□ 3.37
PCDH11XQ9BZA7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC36.07■■■■□ 3.37
PCDH11XQ9BZA7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC36.07■■■■□ 3.36
PCDH11XQ9BZA7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC36.07■■■■□ 3.36
PCDH11XQ9BZA7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
PCDH11XQ9BZA7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
PCDH11XQ9BZA7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC36.04■■■■□ 3.36
PCDH11XQ9BZA7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
PCDH11XQ9BZA7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
PCDH11XQ9BZA7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC36.02■■■■□ 3.36
PCDH11XQ9BZA7 HLA-V-202ENST00000446817 847 ntBASIC36.01■■■■□ 3.35
PCDH11XQ9BZA7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC36■■■■□ 3.35
PCDH11XQ9BZA7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC36■■■■□ 3.35
PCDH11XQ9BZA7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
PCDH11XQ9BZA7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC35.98■■■■□ 3.35
PCDH11XQ9BZA7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
PCDH11XQ9BZA7 ZNRF2P2-203ENST00000454624 420 ntBASIC35.97■■■■□ 3.35
PCDH11XQ9BZA7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
PCDH11XQ9BZA7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
PCDH11XQ9BZA7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC35.96■■■■□ 3.35
PCDH11XQ9BZA7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
PCDH11XQ9BZA7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC35.95■■■■□ 3.35
PCDH11XQ9BZA7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
PCDH11XQ9BZA7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
PCDH11XQ9BZA7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC35.93■■■■□ 3.34
PCDH11XQ9BZA7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
PCDH11XQ9BZA7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC35.9■■■■□ 3.34
PCDH11XQ9BZA7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
PCDH11XQ9BZA7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC35.87■■■■□ 3.33
PCDH11XQ9BZA7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
PCDH11XQ9BZA7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
PCDH11XQ9BZA7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC35.85■■■■□ 3.33
PCDH11XQ9BZA7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC35.84■■■■□ 3.33
PCDH11XQ9BZA7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
PCDH11XQ9BZA7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
PCDH11XQ9BZA7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
PCDH11XQ9BZA7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC35.82■■■■□ 3.32
PCDH11XQ9BZA7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
PCDH11XQ9BZA7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
PCDH11XQ9BZA7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC35.81■■■■□ 3.32
PCDH11XQ9BZA7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
PCDH11XQ9BZA7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
PCDH11XQ9BZA7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC35.8■■■■□ 3.32
PCDH11XQ9BZA7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
PCDH11XQ9BZA7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
PCDH11XQ9BZA7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC35.78■■■■□ 3.32
PCDH11XQ9BZA7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC35.77■■■■□ 3.32
PCDH11XQ9BZA7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
PCDH11XQ9BZA7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
PCDH11XQ9BZA7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
PCDH11XQ9BZA7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
PCDH11XQ9BZA7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
PCDH11XQ9BZA7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC35.76■■■■□ 3.31
PCDH11XQ9BZA7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC35.76■■■■□ 3.31
PCDH11XQ9BZA7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC35.75■■■■□ 3.31
PCDH11XQ9BZA7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
PCDH11XQ9BZA7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
PCDH11XQ9BZA7 DUX4L29-201ENST00000425409 679 ntBASIC35.74■■■■□ 3.31
PCDH11XQ9BZA7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC35.73■■■■□ 3.31
PCDH11XQ9BZA7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC35.7■■■■□ 3.31
PCDH11XQ9BZA7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC35.69■■■■□ 3.3
PCDH11XQ9BZA7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
PCDH11XQ9BZA7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
PCDH11XQ9BZA7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
PCDH11XQ9BZA7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
PCDH11XQ9BZA7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
PCDH11XQ9BZA7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC35.64■■■■□ 3.3
PCDH11XQ9BZA7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
PCDH11XQ9BZA7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
PCDH11XQ9BZA7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
PCDH11XQ9BZA7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC35.62■■■■□ 3.29
PCDH11XQ9BZA7 AC021231.2-201ENST00000594613 730 ntBASIC35.62■■■■□ 3.29
PCDH11XQ9BZA7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC35.59■■■■□ 3.29
PCDH11XQ9BZA7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
PCDH11XQ9BZA7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC35.57■■■■□ 3.28
PCDH11XQ9BZA7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC35.56■■■■□ 3.28
PCDH11XQ9BZA7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC35.55■■■■□ 3.28
PCDH11XQ9BZA7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
PCDH11XQ9BZA7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC35.54■■■■□ 3.28
PCDH11XQ9BZA7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC35.54■■■■□ 3.28
PCDH11XQ9BZA7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
PCDH11XQ9BZA7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
PCDH11XQ9BZA7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC35.52■■■■□ 3.28
PCDH11XQ9BZA7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
PCDH11XQ9BZA7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC35.52■■■■□ 3.28
PCDH11XQ9BZA7 AC108673.1-201ENST00000510422 1159 ntBASIC35.51■■■■□ 3.27
PCDH11XQ9BZA7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
PCDH11XQ9BZA7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
PCDH11XQ9BZA7 MIR6090-201ENST00000622481 60 ntBASIC35.49■■■■□ 3.27
PCDH11XQ9BZA7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC35.49■■■■□ 3.27
PCDH11XQ9BZA7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC35.48■■■■□ 3.27
PCDH11XQ9BZA7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
PCDH11XQ9BZA7 MIR4449-201ENST00000578365 66 ntBASIC35.47■■■■□ 3.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms