Protein–RNA interactions for Protein: Q8WUM4

PDCD6IP, Programmed cell death 6-interacting protein, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IPQ8WUM4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.61■■■□□ 2.01
PDCD6IPQ8WUM4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
PDCD6IPQ8WUM4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PDCD6IPQ8WUM4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.59■■■□□ 2.01
PDCD6IPQ8WUM4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.59■■■□□ 2.01
PDCD6IPQ8WUM4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PDCD6IPQ8WUM4 AC120057.4-201ENST00000624722 1615 ntBASIC27.59■■■□□ 2.01
PDCD6IPQ8WUM4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PDCD6IPQ8WUM4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.58■■■□□ 2.01
PDCD6IPQ8WUM4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PDCD6IPQ8WUM4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
PDCD6IPQ8WUM4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.56■■■□□ 2
PDCD6IPQ8WUM4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.56■■■□□ 2
PDCD6IPQ8WUM4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.55■■■□□ 2
PDCD6IPQ8WUM4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PDCD6IPQ8WUM4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
PDCD6IPQ8WUM4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PDCD6IPQ8WUM4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.54■■■□□ 2
PDCD6IPQ8WUM4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.53■■■□□ 2
PDCD6IPQ8WUM4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.53■■■□□ 2
PDCD6IPQ8WUM4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PDCD6IPQ8WUM4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PDCD6IPQ8WUM4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PDCD6IPQ8WUM4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.52■■■□□ 2
PDCD6IPQ8WUM4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.52■■■□□ 2
PDCD6IPQ8WUM4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
PDCD6IPQ8WUM4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
PDCD6IPQ8WUM4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
PDCD6IPQ8WUM4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PDCD6IPQ8WUM4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PDCD6IPQ8WUM4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.48■■□□□ 1.99
PDCD6IPQ8WUM4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PDCD6IPQ8WUM4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
PDCD6IPQ8WUM4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PDCD6IPQ8WUM4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
PDCD6IPQ8WUM4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PDCD6IPQ8WUM4 CAHM-201ENST00000604200 896 ntBASIC27.44■■□□□ 1.98
PDCD6IPQ8WUM4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PDCD6IPQ8WUM4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PDCD6IPQ8WUM4 AL391121.1-201ENST00000607967 1349 ntBASIC27.42■■□□□ 1.98
PDCD6IPQ8WUM4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
PDCD6IPQ8WUM4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PDCD6IPQ8WUM4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PDCD6IPQ8WUM4 WASH5P-204ENST00000632292 975 ntBASIC27.41■■□□□ 1.98
PDCD6IPQ8WUM4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PDCD6IPQ8WUM4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PDCD6IPQ8WUM4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.38■■□□□ 1.97
PDCD6IPQ8WUM4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDCD6IPQ8WUM4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PDCD6IPQ8WUM4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PDCD6IPQ8WUM4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.35■■□□□ 1.97
PDCD6IPQ8WUM4 SUZ12P1-203ENST00000578195 985 ntBASIC27.35■■□□□ 1.97
PDCD6IPQ8WUM4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.34■■□□□ 1.97
PDCD6IPQ8WUM4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.34■■□□□ 1.97
PDCD6IPQ8WUM4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDCD6IPQ8WUM4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDCD6IPQ8WUM4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
PDCD6IPQ8WUM4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.32■■□□□ 1.96
PDCD6IPQ8WUM4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDCD6IPQ8WUM4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDCD6IPQ8WUM4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDCD6IPQ8WUM4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PDCD6IPQ8WUM4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDCD6IPQ8WUM4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDCD6IPQ8WUM4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.28■■□□□ 1.96
PDCD6IPQ8WUM4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.28■■□□□ 1.96
PDCD6IPQ8WUM4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.27■■□□□ 1.96
PDCD6IPQ8WUM4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDCD6IPQ8WUM4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
PDCD6IPQ8WUM4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PDCD6IPQ8WUM4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PDCD6IPQ8WUM4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDCD6IPQ8WUM4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.23■■□□□ 1.95
PDCD6IPQ8WUM4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PDCD6IPQ8WUM4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDCD6IPQ8WUM4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDCD6IPQ8WUM4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
PDCD6IPQ8WUM4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PDCD6IPQ8WUM4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDCD6IPQ8WUM4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PDCD6IPQ8WUM4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PDCD6IPQ8WUM4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.17■■□□□ 1.94
PDCD6IPQ8WUM4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
PDCD6IPQ8WUM4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.16■■□□□ 1.94
PDCD6IPQ8WUM4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PDCD6IPQ8WUM4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDCD6IPQ8WUM4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PDCD6IPQ8WUM4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDCD6IPQ8WUM4 AL161658.1-201ENST00000623641 1967 ntBASIC27.13■■□□□ 1.93
PDCD6IPQ8WUM4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
PDCD6IPQ8WUM4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
PDCD6IPQ8WUM4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDCD6IPQ8WUM4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.1■■□□□ 1.93
PDCD6IPQ8WUM4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.1■■□□□ 1.93
PDCD6IPQ8WUM4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
PDCD6IPQ8WUM4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PDCD6IPQ8WUM4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.08■■□□□ 1.93
PDCD6IPQ8WUM4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDCD6IPQ8WUM4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PDCD6IPQ8WUM4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 1169.9 ms