Protein–RNA interactions for Protein: Q8TCG5

CPT1C, Carnitine O-palmitoyltransferase 1, brain isoform, humanhuman

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1CQ8TCG5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.09■■□□□ 1.61
CPT1CQ8TCG5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.08■■□□□ 1.61
CPT1CQ8TCG5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPT1CQ8TCG5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.07■■□□□ 1.6
CPT1CQ8TCG5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CPT1CQ8TCG5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CPT1CQ8TCG5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CPT1CQ8TCG5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPT1CQ8TCG5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CPT1CQ8TCG5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CPT1CQ8TCG5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CPT1CQ8TCG5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CPT1CQ8TCG5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CPT1CQ8TCG5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.02■■□□□ 1.6
CPT1CQ8TCG5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.02■■□□□ 1.6
CPT1CQ8TCG5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.02■■□□□ 1.6
CPT1CQ8TCG5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CPT1CQ8TCG5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.01■■□□□ 1.59
CPT1CQ8TCG5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CPT1CQ8TCG5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25■■□□□ 1.59
CPT1CQ8TCG5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.99■■□□□ 1.59
CPT1CQ8TCG5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPT1CQ8TCG5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CPT1CQ8TCG5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.97■■□□□ 1.59
CPT1CQ8TCG5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CPT1CQ8TCG5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.96■■□□□ 1.59
CPT1CQ8TCG5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CPT1CQ8TCG5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CPT1CQ8TCG5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CPT1CQ8TCG5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CPT1CQ8TCG5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CPT1CQ8TCG5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.93■■□□□ 1.58
CPT1CQ8TCG5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CPT1CQ8TCG5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CPT1CQ8TCG5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CPT1CQ8TCG5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CPT1CQ8TCG5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.92■■□□□ 1.58
CPT1CQ8TCG5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CPT1CQ8TCG5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CPT1CQ8TCG5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CPT1CQ8TCG5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.91■■□□□ 1.58
CPT1CQ8TCG5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPT1CQ8TCG5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.9■■□□□ 1.58
CPT1CQ8TCG5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.89■■□□□ 1.58
CPT1CQ8TCG5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.89■■□□□ 1.58
CPT1CQ8TCG5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CPT1CQ8TCG5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CPT1CQ8TCG5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPT1CQ8TCG5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.88■■□□□ 1.57
CPT1CQ8TCG5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.88■■□□□ 1.57
CPT1CQ8TCG5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPT1CQ8TCG5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPT1CQ8TCG5 DUX4L29-201ENST00000425409 679 ntBASIC24.86■■□□□ 1.57
CPT1CQ8TCG5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPT1CQ8TCG5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPT1CQ8TCG5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPT1CQ8TCG5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.84■■□□□ 1.57
CPT1CQ8TCG5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CPT1CQ8TCG5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CPT1CQ8TCG5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.83■■□□□ 1.57
CPT1CQ8TCG5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CPT1CQ8TCG5 WASH5P-204ENST00000632292 975 ntBASIC24.82■■□□□ 1.56
CPT1CQ8TCG5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPT1CQ8TCG5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPT1CQ8TCG5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPT1CQ8TCG5 MIR4449-201ENST00000578365 66 ntBASIC24.8■■□□□ 1.56
CPT1CQ8TCG5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPT1CQ8TCG5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPT1CQ8TCG5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CPT1CQ8TCG5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.76■■□□□ 1.55
CPT1CQ8TCG5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CPT1CQ8TCG5 MIR639-201ENST00000384974 98 ntBASIC24.74■■□□□ 1.55
CPT1CQ8TCG5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CPT1CQ8TCG5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CPT1CQ8TCG5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CPT1CQ8TCG5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.71■■□□□ 1.55
CPT1CQ8TCG5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.71■■□□□ 1.55
CPT1CQ8TCG5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPT1CQ8TCG5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CPT1CQ8TCG5 AC021231.2-201ENST00000594613 730 ntBASIC24.69■■□□□ 1.54
CPT1CQ8TCG5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CPT1CQ8TCG5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CPT1CQ8TCG5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CPT1CQ8TCG5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.67■■□□□ 1.54
CPT1CQ8TCG5 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CPT1CQ8TCG5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CPT1CQ8TCG5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.66■■□□□ 1.54
CPT1CQ8TCG5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CPT1CQ8TCG5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.65■■□□□ 1.54
CPT1CQ8TCG5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CPT1CQ8TCG5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CPT1CQ8TCG5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.64■■□□□ 1.54
CPT1CQ8TCG5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.63■■□□□ 1.53
CPT1CQ8TCG5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.63■■□□□ 1.53
CPT1CQ8TCG5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CPT1CQ8TCG5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.62■■□□□ 1.53
CPT1CQ8TCG5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.62■■□□□ 1.53
CPT1CQ8TCG5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPT1CQ8TCG5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.61■■□□□ 1.53
CPT1CQ8TCG5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms