Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PGBD3Q8N328 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.63■■■□□ 2.01
PGBD3Q8N328 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
PGBD3Q8N328 WASH5P-204ENST00000632292 975 ntBASIC27.62■■■□□ 2.01
PGBD3Q8N328 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
PGBD3Q8N328 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PGBD3Q8N328 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
PGBD3Q8N328 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PGBD3Q8N328 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
PGBD3Q8N328 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PGBD3Q8N328 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.57■■■□□ 2
PGBD3Q8N328 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.56■■■□□ 2
PGBD3Q8N328 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.56■■■□□ 2
PGBD3Q8N328 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.56■■■□□ 2
PGBD3Q8N328 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.56■■■□□ 2
PGBD3Q8N328 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
PGBD3Q8N328 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.55■■■□□ 2
PGBD3Q8N328 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PGBD3Q8N328 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PGBD3Q8N328 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.52■■■□□ 2
PGBD3Q8N328 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.52■■■□□ 2
PGBD3Q8N328 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.52■■■□□ 2
PGBD3Q8N328 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.52■■■□□ 2
PGBD3Q8N328 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.51■■□□□ 1.99
PGBD3Q8N328 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.51■■□□□ 1.99
PGBD3Q8N328 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PGBD3Q8N328 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PGBD3Q8N328 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PGBD3Q8N328 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.49■■□□□ 1.99
PGBD3Q8N328 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PGBD3Q8N328 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PGBD3Q8N328 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PGBD3Q8N328 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.48■■□□□ 1.99
PGBD3Q8N328 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PGBD3Q8N328 HLA-V-202ENST00000446817 847 ntBASIC27.47■■□□□ 1.99
PGBD3Q8N328 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.45■■□□□ 1.98
PGBD3Q8N328 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PGBD3Q8N328 ZNRF2P2-203ENST00000454624 420 ntBASIC27.44■■□□□ 1.98
PGBD3Q8N328 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PGBD3Q8N328 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.43■■□□□ 1.98
PGBD3Q8N328 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PGBD3Q8N328 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PGBD3Q8N328 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PGBD3Q8N328 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PGBD3Q8N328 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PGBD3Q8N328 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
PGBD3Q8N328 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PGBD3Q8N328 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PGBD3Q8N328 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PGBD3Q8N328 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.38■■□□□ 1.97
PGBD3Q8N328 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
PGBD3Q8N328 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.36■■□□□ 1.97
PGBD3Q8N328 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PGBD3Q8N328 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.35■■□□□ 1.97
PGBD3Q8N328 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PGBD3Q8N328 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PGBD3Q8N328 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.34■■□□□ 1.97
PGBD3Q8N328 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.34■■□□□ 1.97
PGBD3Q8N328 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PGBD3Q8N328 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PGBD3Q8N328 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PGBD3Q8N328 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
PGBD3Q8N328 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PGBD3Q8N328 DUX4L29-201ENST00000425409 679 ntBASIC27.31■■□□□ 1.96
PGBD3Q8N328 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PGBD3Q8N328 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PGBD3Q8N328 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PGBD3Q8N328 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
PGBD3Q8N328 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.29■■□□□ 1.96
PGBD3Q8N328 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.29■■□□□ 1.96
PGBD3Q8N328 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PGBD3Q8N328 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PGBD3Q8N328 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.28■■□□□ 1.96
PGBD3Q8N328 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PGBD3Q8N328 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.28■■□□□ 1.96
PGBD3Q8N328 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PGBD3Q8N328 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PGBD3Q8N328 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.26■■□□□ 1.95
PGBD3Q8N328 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
PGBD3Q8N328 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PGBD3Q8N328 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.25■■□□□ 1.95
PGBD3Q8N328 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PGBD3Q8N328 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.24■■□□□ 1.95
PGBD3Q8N328 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
PGBD3Q8N328 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.24■■□□□ 1.95
PGBD3Q8N328 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PGBD3Q8N328 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
PGBD3Q8N328 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.23■■□□□ 1.95
PGBD3Q8N328 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.23■■□□□ 1.95
PGBD3Q8N328 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PGBD3Q8N328 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PGBD3Q8N328 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
PGBD3Q8N328 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PGBD3Q8N328 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PGBD3Q8N328 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
PGBD3Q8N328 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.2■■□□□ 1.94
PGBD3Q8N328 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.2■■□□□ 1.94
PGBD3Q8N328 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PGBD3Q8N328 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PGBD3Q8N328 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms