Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RAI1Q7Z5J4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RAI1Q7Z5J4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAI1Q7Z5J4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAI1Q7Z5J4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAI1Q7Z5J4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.45■■□□□ 1.35
RAI1Q7Z5J4 MIR7108-201ENST00000614319 87 ntBASIC23.45■■□□□ 1.35
RAI1Q7Z5J4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAI1Q7Z5J4 ABHD17AP4-201ENST00000411545 909 ntBASIC23.45■■□□□ 1.34
RAI1Q7Z5J4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAI1Q7Z5J4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
RAI1Q7Z5J4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RAI1Q7Z5J4 WASH5P-204ENST00000632292 975 ntBASIC23.44■■□□□ 1.34
RAI1Q7Z5J4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAI1Q7Z5J4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.43■■□□□ 1.34
RAI1Q7Z5J4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAI1Q7Z5J4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.43■■□□□ 1.34
RAI1Q7Z5J4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RAI1Q7Z5J4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAI1Q7Z5J4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAI1Q7Z5J4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.41■■□□□ 1.34
RAI1Q7Z5J4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.4■■□□□ 1.34
RAI1Q7Z5J4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAI1Q7Z5J4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAI1Q7Z5J4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAI1Q7Z5J4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
RAI1Q7Z5J4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAI1Q7Z5J4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.37■■□□□ 1.33
RAI1Q7Z5J4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
RAI1Q7Z5J4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
RAI1Q7Z5J4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAI1Q7Z5J4 HLA-V-202ENST00000446817 847 ntBASIC23.35■■□□□ 1.33
RAI1Q7Z5J4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.35■■□□□ 1.33
RAI1Q7Z5J4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAI1Q7Z5J4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
RAI1Q7Z5J4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RAI1Q7Z5J4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAI1Q7Z5J4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RAI1Q7Z5J4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.32■■□□□ 1.32
RAI1Q7Z5J4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.32■■□□□ 1.32
RAI1Q7Z5J4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.32■■□□□ 1.32
RAI1Q7Z5J4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAI1Q7Z5J4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAI1Q7Z5J4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAI1Q7Z5J4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAI1Q7Z5J4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
RAI1Q7Z5J4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.3■■□□□ 1.32
RAI1Q7Z5J4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.3■■□□□ 1.32
RAI1Q7Z5J4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RAI1Q7Z5J4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RAI1Q7Z5J4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.29■■□□□ 1.32
RAI1Q7Z5J4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAI1Q7Z5J4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAI1Q7Z5J4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
RAI1Q7Z5J4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAI1Q7Z5J4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAI1Q7Z5J4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAI1Q7Z5J4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.26■■□□□ 1.31
RAI1Q7Z5J4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAI1Q7Z5J4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.26■■□□□ 1.31
RAI1Q7Z5J4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.25■■□□□ 1.31
RAI1Q7Z5J4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.25■■□□□ 1.31
RAI1Q7Z5J4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAI1Q7Z5J4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.24■■□□□ 1.31
RAI1Q7Z5J4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAI1Q7Z5J4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RAI1Q7Z5J4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.21■■□□□ 1.31
RAI1Q7Z5J4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAI1Q7Z5J4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAI1Q7Z5J4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAI1Q7Z5J4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAI1Q7Z5J4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.18■■□□□ 1.3
RAI1Q7Z5J4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAI1Q7Z5J4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAI1Q7Z5J4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAI1Q7Z5J4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.18■■□□□ 1.3
RAI1Q7Z5J4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.17■■□□□ 1.3
RAI1Q7Z5J4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.17■■□□□ 1.3
RAI1Q7Z5J4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAI1Q7Z5J4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAI1Q7Z5J4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAI1Q7Z5J4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.15■■□□□ 1.3
RAI1Q7Z5J4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.14■■□□□ 1.29
RAI1Q7Z5J4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.14■■□□□ 1.29
RAI1Q7Z5J4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
RAI1Q7Z5J4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RAI1Q7Z5J4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAI1Q7Z5J4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RAI1Q7Z5J4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAI1Q7Z5J4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAI1Q7Z5J4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAI1Q7Z5J4 ZNRF2P2-203ENST00000454624 420 ntBASIC23.11■■□□□ 1.29
RAI1Q7Z5J4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RAI1Q7Z5J4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
RAI1Q7Z5J4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RAI1Q7Z5J4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.1■■□□□ 1.29
RAI1Q7Z5J4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RAI1Q7Z5J4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.09■■□□□ 1.29
RAI1Q7Z5J4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.09■■□□□ 1.29
RAI1Q7Z5J4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms