Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NACAE9PAV3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NACAE9PAV3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NACAE9PAV3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NACAE9PAV3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NACAE9PAV3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.55■□□□□ 0.72
NACAE9PAV3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.55■□□□□ 0.72
NACAE9PAV3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NACAE9PAV3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
NACAE9PAV3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NACAE9PAV3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NACAE9PAV3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NACAE9PAV3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.53■□□□□ 0.72
NACAE9PAV3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NACAE9PAV3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NACAE9PAV3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NACAE9PAV3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NACAE9PAV3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NACAE9PAV3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NACAE9PAV3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NACAE9PAV3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.5■□□□□ 0.71
NACAE9PAV3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NACAE9PAV3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.5■□□□□ 0.71
NACAE9PAV3 AC136428.2-201ENST00000563187 214 ntBASIC19.5■□□□□ 0.71
NACAE9PAV3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NACAE9PAV3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NACAE9PAV3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.49■□□□□ 0.71
NACAE9PAV3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NACAE9PAV3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.49■□□□□ 0.71
NACAE9PAV3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.48■□□□□ 0.71
NACAE9PAV3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.48■□□□□ 0.71
NACAE9PAV3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.47■□□□□ 0.71
NACAE9PAV3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NACAE9PAV3 SETD8P1-201ENST00000623146 1180 ntBASIC19.46■□□□□ 0.71
NACAE9PAV3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NACAE9PAV3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NACAE9PAV3 ABCB10P1-201ENST00000614297 2181 ntBASIC19.45■□□□□ 0.7
NACAE9PAV3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NACAE9PAV3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.45■□□□□ 0.7
NACAE9PAV3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NACAE9PAV3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.44■□□□□ 0.7
NACAE9PAV3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NACAE9PAV3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NACAE9PAV3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NACAE9PAV3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NACAE9PAV3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.39■□□□□ 0.69
NACAE9PAV3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.39■□□□□ 0.69
NACAE9PAV3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
NACAE9PAV3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.39■□□□□ 0.69
NACAE9PAV3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NACAE9PAV3 AC097358.2-201ENST00000607541 1159 ntBASIC19.38■□□□□ 0.69
NACAE9PAV3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NACAE9PAV3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.37■□□□□ 0.69
NACAE9PAV3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NACAE9PAV3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NACAE9PAV3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NACAE9PAV3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NACAE9PAV3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.36■□□□□ 0.69
NACAE9PAV3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NACAE9PAV3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NACAE9PAV3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NACAE9PAV3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.34■□□□□ 0.69
NACAE9PAV3 SUZ12P1-203ENST00000578195 985 ntBASIC19.34■□□□□ 0.69
NACAE9PAV3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NACAE9PAV3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NACAE9PAV3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NACAE9PAV3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NACAE9PAV3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NACAE9PAV3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NACAE9PAV3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NACAE9PAV3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NACAE9PAV3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NACAE9PAV3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NACAE9PAV3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NACAE9PAV3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NACAE9PAV3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.29■□□□□ 0.68
NACAE9PAV3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.29■□□□□ 0.68
NACAE9PAV3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.29■□□□□ 0.68
NACAE9PAV3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.28■□□□□ 0.68
NACAE9PAV3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NACAE9PAV3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NACAE9PAV3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NACAE9PAV3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NACAE9PAV3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NACAE9PAV3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NACAE9PAV3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
NACAE9PAV3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NACAE9PAV3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NACAE9PAV3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NACAE9PAV3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NACAE9PAV3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NACAE9PAV3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NACAE9PAV3 AL161658.1-201ENST00000623641 1967 ntBASIC19.23■□□□□ 0.67
NACAE9PAV3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NACAE9PAV3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NACAE9PAV3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NACAE9PAV3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NACAE9PAV3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.23■□□□□ 0.67
NACAE9PAV3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NACAE9PAV3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms