Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 ABCB10P3-201ENST00000561950 2166 ntBASIC18.95■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV8-3A0A0A6YYJ7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.89■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 AL161658.1-201ENST00000623641 1967 ntBASIC18.85■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV8-3A0A0A6YYJ7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 AC139426.1-201ENST00000568218 2529 ntBASIC18.8■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 AC120057.4-201ENST00000624722 1615 ntBASIC18.77■□□□□ 0.6
TRAV8-3A0A0A6YYJ7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV8-3A0A0A6YYJ7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms