Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.42■■□□□ 1.98
MSANTD3-TMEFF1A0A0A6YYJ0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.4■■□□□ 1.98
MSANTD3-TMEFF1A0A0A6YYJ0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
MSANTD3-TMEFF1A0A0A6YYJ0 ZNRF2P2-203ENST00000454624 420 ntBASIC27.38■■□□□ 1.97
MSANTD3-TMEFF1A0A0A6YYJ0 WASH5P-204ENST00000632292 975 ntBASIC27.37■■□□□ 1.97
MSANTD3-TMEFF1A0A0A6YYJ0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.33■■□□□ 1.97
MSANTD3-TMEFF1A0A0A6YYJ0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.33■■□□□ 1.97
MSANTD3-TMEFF1A0A0A6YYJ0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.32■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.27■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
MSANTD3-TMEFF1A0A0A6YYJ0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.26■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.26■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.25■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.21■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.2■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.18■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.17■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4L29-201ENST00000425409 679 ntBASIC27.16■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.16■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
MSANTD3-TMEFF1A0A0A6YYJ0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.12■■□□□ 1.93
MSANTD3-TMEFF1A0A0A6YYJ0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
MSANTD3-TMEFF1A0A0A6YYJ0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
MSANTD3-TMEFF1A0A0A6YYJ0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
MSANTD3-TMEFF1A0A0A6YYJ0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
MSANTD3-TMEFF1A0A0A6YYJ0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
MSANTD3-TMEFF1A0A0A6YYJ0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
MSANTD3-TMEFF1A0A0A6YYJ0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.08■■□□□ 1.93
MSANTD3-TMEFF1A0A0A6YYJ0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.08■■□□□ 1.93
MSANTD3-TMEFF1A0A0A6YYJ0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.07■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.06■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 AC021231.2-201ENST00000594613 730 ntBASIC27.04■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.03■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.02■■□□□ 1.92
MSANTD3-TMEFF1A0A0A6YYJ0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MSANTD3-TMEFF1A0A0A6YYJ0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27■■□□□ 1.91
MSANTD3-TMEFF1A0A0A6YYJ0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MSANTD3-TMEFF1A0A0A6YYJ0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.99■■□□□ 1.91
MSANTD3-TMEFF1A0A0A6YYJ0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
MSANTD3-TMEFF1A0A0A6YYJ0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
MSANTD3-TMEFF1A0A0A6YYJ0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.96■■□□□ 1.91
MSANTD3-TMEFF1A0A0A6YYJ0 MIR4449-201ENST00000578365 66 ntBASIC26.94■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.94■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.92■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 MIR639-201ENST00000384974 98 ntBASIC26.91■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 MIR6090-201ENST00000622481 60 ntBASIC26.91■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 AC108673.1-201ENST00000510422 1159 ntBASIC26.9■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.89■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.89■■□□□ 1.9
MSANTD3-TMEFF1A0A0A6YYJ0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MSANTD3-TMEFF1A0A0A6YYJ0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MSANTD3-TMEFF1A0A0A6YYJ0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.88■■□□□ 1.89
MSANTD3-TMEFF1A0A0A6YYJ0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.88■■□□□ 1.89
MSANTD3-TMEFF1A0A0A6YYJ0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.88■■□□□ 1.89
MSANTD3-TMEFF1A0A0A6YYJ0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms