Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.39■■□□□ 1.332e-6■■■■■ 29.8
U2AF2P26368 ADARB1-212ENST00000496664 5033 ntTSL 1 (best)23.39■■□□□ 1.332e-6■■■■■ 29.8
U2AF2P26368 ADARB1-203ENST00000389861 5031 ntTSL 1 (best)23.39■■□□□ 1.332e-6■■■■■ 29.8
U2AF2P26368 ADARB1-211ENST00000492414 4913 ntTSL 1 (best)22.36■■□□□ 1.172e-6■■■■■ 29.8
U2AF2P26368 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.862e-6■■■■■ 29.8
U2AF2P26368 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.23■□□□□ 0.672e-6■■■■■ 29.8
U2AF2P26368 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.82■□□□□ 0.62e-6■■■■■ 29.8
U2AF2P26368 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC14.29□□□□□ -0.122e-6■■■■■ 29.8
U2AF2P26368 ASPH-227ENST00000523897 871 ntTSL 38.49□□□□□ -1.057e-7■■■■■ 29.8
U2AF2P26368 RNASET2-205ENST00000467705 524 ntTSL 511.47□□□□□ -0.573e-7■■■■■ 29.8
U2AF2P26368 HNRNPU-217ENST00000638952 5678 ntTSL 519.45■□□□□ 0.75e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-228ENST00000640306 2917 ntTSL 519.43■□□□□ 0.75e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.535e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.31■□□□□ 0.525e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-209ENST00000476241 4844 ntTSL 518.26■□□□□ 0.515e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.515e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-214ENST00000638475 2698 ntTSL 518.14■□□□□ 0.495e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.215e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-202ENST00000366525 2851 ntTSL 511.97□□□□□ -0.495e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-224ENST00000640056 2045 ntTSL 511.81□□□□□ -0.525e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC11.13□□□□□ -0.635e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC9.74□□□□□ -0.855e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-222ENST00000639880 4239 ntTSL 59.63□□□□□ -0.875e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.77□□□□□ -1.015e-11■■■■■ 29.8
U2AF2P26368 HNRNPU-207ENST00000468690 5273 ntTSL 58.54□□□□□ -1.045e-11■■■■■ 29.8
U2AF2P26368 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.769e-7■■■■■ 29.8
U2AF2P26368 DPH6-201ENST00000256538 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.582e-11■■■■■ 29.8
U2AF2P26368 DPH6-207ENST00000560386 3438 ntTSL 1 (best)9.71□□□□□ -0.852e-11■■■■■ 29.8
U2AF2P26368 DPH6-203ENST00000558266 465 ntTSL 52.67□□□□□ -1.982e-11■■■■■ 29.8
U2AF2P26368 DPH6-204ENST00000558973 484 ntTSL 52.1□□□□□ -2.072e-11■■■■■ 29.8
U2AF2P26368 MIR222-201ENST00000384992 110 ntBASIC1.1□□□□□ -2.232e-11■■■■■ 29.8
U2AF2P26368 MVB12A-210ENST00000529490 480 ntTSL 416.92■□□□□ 0.31e-10■■■■■ 29.8
U2AF2P26368 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC15.66■□□□□ 0.11e-10■■■■■ 29.8
U2AF2P26368 MVB12A-208ENST00000528911 820 ntTSL 514.09□□□□□ -0.151e-10■■■■■ 29.8
U2AF2P26368 MVB12A-214ENST00000600514 795 ntTSL 514.09□□□□□ -0.151e-10■■■■■ 29.8
U2AF2P26368 MVB12A-205ENST00000528604 656 ntTSL 312.93□□□□□ -0.341e-10■■■■■ 29.8
U2AF2P26368 BISPR-207ENST00000634942 376 ntTSL 53.43□□□□□ -1.861e-10■■■■■ 29.8
U2AF2P26368 BISPR-201ENST00000634291 340 ntTSL 5-1.17□□□□□ -2.61e-10■■■■■ 29.8
U2AF2P26368 HNRNPD-206ENST00000508119 735 ntTSL 210.37□□□□□ -0.756e-12■■■■■ 29.8
U2AF2P26368 CSNK1D-225ENST00000584913 295 ntTSL 218.78■□□□□ 0.69e-13■■■■■ 29.8
U2AF2P26368 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.73■□□□□ 0.119e-13■■■■■ 29.8
U2AF2P26368 CSNK1D-224ENST00000584672 401 ntTSL 315.47■□□□□ 0.079e-13■■■■■ 29.8
U2AF2P26368 CSNK1D-208ENST00000578501 1124 ntTSL 215.33■□□□□ 0.049e-13■■■■■ 29.8
U2AF2P26368 CSNK1D-220ENST00000581737 631 ntTSL 215.25■□□□□ 0.039e-13■■■■■ 29.8
U2AF2P26368 AL590617.2-203ENST00000458733 703 ntTSL 214.06□□□□□ -0.169e-13■■■■■ 29.8
U2AF2P26368 AL590617.2-204ENST00000447494 774 ntTSL 214.06□□□□□ -0.169e-13■■■■■ 29.8
U2AF2P26368 CSNK1D-206ENST00000577578 928 ntTSL 213.9□□□□□ -0.189e-13■■■■■ 29.8
U2AF2P26368 AL590617.2-202ENST00000428044 421 ntTSL 511.19□□□□□ -0.629e-13■■■■■ 29.8
U2AF2P26368 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC10.19□□□□□ -0.782e-7■■■■■ 29.8
U2AF2P26368 ECHDC1-215ENST00000475319 1543 ntTSL 27.04□□□□□ -1.287e-7■■■■■ 29.7
U2AF2P26368 TP53BP1-214ENST00000480860 586 ntTSL 36.4□□□□□ -1.384e-18■■■■■ 29.7
U2AF2P26368 SETD5-213ENST00000459941 1074 ntTSL 513.38□□□□□ -0.271e-22■■■■■ 29.7
U2AF2P26368 CPEB4-207ENST00000519835 2257 ntTSL 1 (best) BASIC14.07□□□□□ -0.162e-6■■■■■ 29.6
U2AF2P26368 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.566e-7■■■■■ 29.6
U2AF2P26368 DHX38-214ENST00000579387 2258 ntTSL 520.21■□□□□ 0.836e-7■■■■■ 29.6
U2AF2P26368 DHX38-207ENST00000566329 683 ntTSL 219.85■□□□□ 0.776e-7■■■■■ 29.6
U2AF2P26368 TTC31-203ENST00000414247 833 ntAPPRIS ALT2 TSL 316.47■□□□□ 0.236e-7■■■■■ 29.6
U2AF2P26368 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.036e-7■■■■■ 29.6
U2AF2P26368 HDAC3-205ENST00000469550 1952 ntTSL 1 (best)11.28□□□□□ -0.66e-7■■■■■ 29.6
U2AF2P26368 HDAC3-203ENST00000467533 663 ntTSL 311.25□□□□□ -0.616e-7■■■■■ 29.6
U2AF2P26368 HDAC3-208ENST00000476739 422 ntTSL 310.95□□□□□ -0.666e-7■■■■■ 29.6
U2AF2P26368 HDAC3-215ENST00000519474 736 ntTSL 310.46□□□□□ -0.736e-7■■■■■ 29.6
U2AF2P26368 HDAC3-202ENST00000459727 524 ntTSL 510.23□□□□□ -0.776e-7■■■■■ 29.6
U2AF2P26368 HDAC3-212ENST00000492407 782 ntTSL 510.04□□□□□ -0.86e-7■■■■■ 29.6
U2AF2P26368 HDAC3-216ENST00000523088 699 ntTSL 38.43□□□□□ -1.066e-7■■■■■ 29.6
U2AF2P26368 WDR27-202ENST00000441385 683 ntTSL 313.35□□□□□ -0.274e-16■■■■■ 29.5
U2AF2P26368 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.661e-8■■■■■ 29.5
U2AF2P26368 EIF4G3-208ENST00000438975 1270 ntTSL 523.39■■□□□ 1.332e-10■■■■■ 29.5
U2AF2P26368 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.48■□□□□ 0.712e-10■■■■■ 29.5
U2AF2P26368 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.562e-10■■■■■ 29.5
U2AF2P26368 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.412e-10■■■■■ 29.5
U2AF2P26368 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.112e-10■■■■■ 29.5
U2AF2P26368 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC10.42□□□□□ -0.742e-10■■■■■ 29.5
U2AF2P26368 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.952e-10■■■■■ 29.5
U2AF2P26368 SFSWAP-204ENST00000535399 778 ntTSL 225.68■■□□□ 1.78e-9■■■■■ 29.5
U2AF2P26368 THRB-210ENST00000447414 575 ntTSL 421.62■■□□□ 1.052e-7■■■■■ 29.5
U2AF2P26368 THRB-204ENST00000413780 896 ntTSL 320.26■□□□□ 0.832e-7■■■■■ 29.5
U2AF2P26368 THRB-212ENST00000453729 703 ntTSL 1 (best)19.39■□□□□ 0.692e-7■■■■■ 29.5
U2AF2P26368 THRB-206ENST00000416420 2571 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.232e-7■■■■■ 29.5
U2AF2P26368 THRB-211ENST00000447875 754 ntTSL 1 (best)10.83□□□□□ -0.682e-7■■■■■ 29.5
U2AF2P26368 THRB-209ENST00000431815 568 ntTSL 1 (best)9.18□□□□□ -0.942e-7■■■■■ 29.5
U2AF2P26368 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.952e-7■■■■■ 29.5
U2AF2P26368 THRB-205ENST00000415021 671 ntTSL 1 (best)7.7□□□□□ -1.182e-7■■■■■ 29.5
U2AF2P26368 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.252e-7■■■■■ 29.5
U2AF2P26368 SOX5-214ENST00000542241 376 ntTSL 33.95□□□□□ -1.788e-8■■■■■ 29.5
U2AF2P26368 PITPNA-210ENST00000576722 793 ntTSL 330.91■■■□□ 2.541e-18■■■■■ 29.5
U2AF2P26368 PITPNA-207ENST00000575288 1264 ntTSL 230.62■■■□□ 2.491e-18■■■■■ 29.5
U2AF2P26368 PITPNA-209ENST00000576010 573 ntTSL 528.7■■■□□ 2.181e-18■■■■■ 29.5
U2AF2P26368 PITPNA-211ENST00000576761 589 ntTSL 428.7■■■□□ 2.181e-18■■■■■ 29.5
U2AF2P26368 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.91e-18■■■■■ 29.5
U2AF2P26368 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.561e-18■■■■■ 29.5
U2AF2P26368 PITPNA-205ENST00000573231 504 ntTSL 412.39□□□□□ -0.431e-18■■■■■ 29.5
U2AF2P26368 PITPNA-204ENST00000573056 571 ntTSL 510.68□□□□□ -0.71e-18■■■■■ 29.5
U2AF2P26368 PITPNA-208ENST00000575895 591 ntTSL 47.44□□□□□ -1.221e-18■■■■■ 29.5
U2AF2P26368 PITPNA-206ENST00000574991 627 ntTSL 36.42□□□□□ -1.381e-18■■■■■ 29.5
U2AF2P26368 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.11■■■□□ 2.093e-32■■■■■ 29.5
U2AF2P26368 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.35■■□□□ 1.973e-32■■■■■ 29.5
U2AF2P26368 WIPI2-206ENST00000466014 1700 ntTSL 1 (best)26.33■■□□□ 1.813e-32■■■■■ 29.5
U2AF2P26368 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.293e-32■■■■■ 29.5
U2AF2P26368 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.88■□□□□ 0.773e-32■■■■■ 29.5
Retrieved 100 of 36,523 protein–RNA pairs in 517.4 ms