RNA–Protein interactions for RNA: ENST00000528911.5

MVB12A-208, Transcript of multivesicular body subunit 12A, humanhuman

TSL 5

Gene MVB12A, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-208ENST00000528911 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.4
MVB12A-208ENST00000528911 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
MVB12A-208ENST00000528911 ABCC9O60706 1549 aa25.98■■□□□ 1.75
MVB12A-208ENST00000528911 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
MVB12A-208ENST00000528911 NACADO15069 1562 aa25.01■■□□□ 1.59
MVB12A-208ENST00000528911 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
MVB12A-208ENST00000528911 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
MVB12A-208ENST00000528911 MYO15BQ96JP2 1530 aa24.89■■□□□ 1.57
MVB12A-208ENST00000528911 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
MVB12A-208ENST00000528911 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
MVB12A-208ENST00000528911 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.49
MVB12A-208ENST00000528911 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
MVB12A-208ENST00000528911 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
MVB12A-208ENST00000528911 SHROOM4Q9ULL8 1493 aa23.98■■□□□ 1.43
MVB12A-208ENST00000528911 DNAJC5BQ9UF47 199 aa23.82■■□□□ 1.4
MVB12A-208ENST00000528911 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
MVB12A-208ENST00000528911 CC2D2AQ9P2K1 1620 aa23.48■■□□□ 1.35
MVB12A-208ENST00000528911 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.34
MVB12A-208ENST00000528911 SMARCA4P51532 1647 aa23.24■■□□□ 1.31
MVB12A-208ENST00000528911 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
MVB12A-208ENST00000528911 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.29
MVB12A-208ENST00000528911 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
MVB12A-208ENST00000528911 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
MVB12A-208ENST00000528911 SMARCA2P51531 1590 aa23.08■■□□□ 1.29
MVB12A-208ENST00000528911 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
MVB12A-208ENST00000528911 HMGXB3Q12766 1538 aa22.95■■□□□ 1.26
MVB12A-208ENST00000528911 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
MVB12A-208ENST00000528911 RSF1Q96T23 1441 aaPredicted RBP22.92■■□□□ 1.26
MVB12A-208ENST00000528911 WIZO95785 1651 aa22.87■■□□□ 1.25
MVB12A-208ENST00000528911 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
MVB12A-208ENST00000528911 NESP48681 1621 aa22.51■■□□□ 1.19
MVB12A-208ENST00000528911 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
MVB12A-208ENST00000528911 CADPSQ9ULU8 1353 aa22.45■■□□□ 1.18
MVB12A-208ENST00000528911 LAMC3Q9Y6N6 1575 aa22.44■■□□□ 1.18
MVB12A-208ENST00000528911 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
MVB12A-208ENST00000528911 ERCC6Q03468 1493 aa22.37■■□□□ 1.17
MVB12A-208ENST00000528911 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
MVB12A-208ENST00000528911 CFTRP13569 1480 aa22.32■■□□□ 1.16
MVB12A-208ENST00000528911 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.15
MVB12A-208ENST00000528911 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
MVB12A-208ENST00000528911 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
MVB12A-208ENST00000528911 CUX2O14529 1486 aa22.1■■□□□ 1.13
MVB12A-208ENST00000528911 THOC2Q8NI27 1593 aaKnown RBP22.1■■□□□ 1.13
MVB12A-208ENST00000528911 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
MVB12A-208ENST00000528911 MRC2Q9UBG0 1479 aa22.07■■□□□ 1.12
MVB12A-208ENST00000528911 WDR62O43379 1518 aa21.98■■□□□ 1.11
MVB12A-208ENST00000528911 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
MVB12A-208ENST00000528911 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
MVB12A-208ENST00000528911 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
MVB12A-208ENST00000528911 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
MVB12A-208ENST00000528911 CUX1P39880 1505 aa21.69■■□□□ 1.06
MVB12A-208ENST00000528911 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
MVB12A-208ENST00000528911 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.06
MVB12A-208ENST00000528911 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
MVB12A-208ENST00000528911 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.059e-6■■■■■ 50.1
MVB12A-208ENST00000528911 SOGA1O94964 1423 aa21.59■■□□□ 1.05
MVB12A-208ENST00000528911 RAD54L2Q9Y4B4 1467 aa21.57■■□□□ 1.04
MVB12A-208ENST00000528911 ZNF608Q9ULD9 1512 aaPredicted RBP21.56■■□□□ 1.04
MVB12A-208ENST00000528911 TARBP1Q13395 1621 aaKnown RBP21.56■■□□□ 1.04
MVB12A-208ENST00000528911 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
MVB12A-208ENST00000528911 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
MVB12A-208ENST00000528911 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
MVB12A-208ENST00000528911 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.037e-8■■■■□ 23.6
MVB12A-208ENST00000528911 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
MVB12A-208ENST00000528911 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
MVB12A-208ENST00000528911 ABCA10Q8WWZ4 1543 aa21.4■■□□□ 1.02
MVB12A-208ENST00000528911 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
MVB12A-208ENST00000528911 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
MVB12A-208ENST00000528911 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
MVB12A-208ENST00000528911 GRIN2BQ13224 1484 aa21.3■■□□□ 1
MVB12A-208ENST00000528911 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
MVB12A-208ENST00000528911 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
MVB12A-208ENST00000528911 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
MVB12A-208ENST00000528911 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
MVB12A-208ENST00000528911 FBLN2P98095 1184 aa21.21■□□□□ 0.99
MVB12A-208ENST00000528911 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
MVB12A-208ENST00000528911 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
MVB12A-208ENST00000528911 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
MVB12A-208ENST00000528911 CHD1O14646 1710 aa21.15■□□□□ 0.98
MVB12A-208ENST00000528911 KIF27Q86VH2 1401 aa21.14■□□□□ 0.98
MVB12A-208ENST00000528911 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.97
MVB12A-208ENST00000528911 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
MVB12A-208ENST00000528911 IGF1RP08069 1367 aa21.09■□□□□ 0.97
MVB12A-208ENST00000528911 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.97
MVB12A-208ENST00000528911 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
MVB12A-208ENST00000528911 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
MVB12A-208ENST00000528911 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
MVB12A-208ENST00000528911 RUSC2Q8N2Y8 1516 aa21■□□□□ 0.95
MVB12A-208ENST00000528911 CARMIL1Q5VZK9 1371 aa20.95■□□□□ 0.94
MVB12A-208ENST00000528911 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
MVB12A-208ENST00000528911 CUL7Q14999 1698 aa20.93■□□□□ 0.94
MVB12A-208ENST00000528911 NUP160Q12769 1436 aa20.93■□□□□ 0.94
MVB12A-208ENST00000528911 CEP170Q5SW79 1584 aa20.89■□□□□ 0.94
MVB12A-208ENST00000528911 ARHGEF11O15085 1522 aa20.86■□□□□ 0.93
MVB12A-208ENST00000528911 RIMBP3CA6NJZ7 1639 aa20.83■□□□□ 0.93
MVB12A-208ENST00000528911 RIMBP3BA6NNM3 1639 aa20.83■□□□□ 0.93
MVB12A-208ENST00000528911 RIMBP3Q9UFD9 1639 aa20.83■□□□□ 0.93
MVB12A-208ENST00000528911 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
MVB12A-208ENST00000528911 RAPGEF2Q9Y4G8 1499 aa20.81■□□□□ 0.92
MVB12A-208ENST00000528911 EEA1Q15075 1411 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms