RNA–Protein interactions for RNA: ENST00000638475.1

HNRNPU-214, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-214ENST00000638475 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
HNRNPU-214ENST00000638475 CCDC180Q9P1Z9 1646 aa29.56■■■□□ 2.32
HNRNPU-214ENST00000638475 ABCC9O60706 1549 aa28.46■■■□□ 2.15
HNRNPU-214ENST00000638475 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
HNRNPU-214ENST00000638475 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
HNRNPU-214ENST00000638475 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
HNRNPU-214ENST00000638475 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
HNRNPU-214ENST00000638475 NACADO15069 1562 aa27.68■■■□□ 2.02
HNRNPU-214ENST00000638475 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2
HNRNPU-214ENST00000638475 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
HNRNPU-214ENST00000638475 SCRIBQ14160 1630 aa27.27■■□□□ 1.96
HNRNPU-214ENST00000638475 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
HNRNPU-214ENST00000638475 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
HNRNPU-214ENST00000638475 BICRAQ9NZM4 1560 aa26.73■■□□□ 1.87
HNRNPU-214ENST00000638475 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
HNRNPU-214ENST00000638475 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
HNRNPU-214ENST00000638475 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
HNRNPU-214ENST00000638475 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
HNRNPU-214ENST00000638475 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
HNRNPU-214ENST00000638475 SMARCA4P51532 1647 aa26.07■■□□□ 1.76
HNRNPU-214ENST00000638475 EIF4G1Q04637 1599 aaKnown RBP25.96■■□□□ 1.75
HNRNPU-214ENST00000638475 WIZO95785 1651 aa25.94■■□□□ 1.74
HNRNPU-214ENST00000638475 ATAD2BQ9ULI0 1458 aa25.78■■□□□ 1.72
HNRNPU-214ENST00000638475 PEG3Q9GZU2 1588 aa25.72■■□□□ 1.71
HNRNPU-214ENST00000638475 SMARCA2P51531 1590 aa25.71■■□□□ 1.71
HNRNPU-214ENST00000638475 CC2D2AQ9P2K1 1620 aa25.68■■□□□ 1.7
HNRNPU-214ENST00000638475 BAZ1BQ9UIG0 1483 aaKnown RBP25.62■■□□□ 1.69
HNRNPU-214ENST00000638475 TOP2AP11388 1531 aaKnown RBP25.6■■□□□ 1.69
HNRNPU-214ENST00000638475 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
HNRNPU-214ENST00000638475 DNAJC5BQ9UF47 199 aa25.5■■□□□ 1.67
HNRNPU-214ENST00000638475 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
HNRNPU-214ENST00000638475 CCDC88BA6NC98 1476 aa25.42■■□□□ 1.66
HNRNPU-214ENST00000638475 PELP1Q8IZL8 1130 aaKnown RBP25.35■■□□□ 1.65
HNRNPU-214ENST00000638475 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
HNRNPU-214ENST00000638475 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
HNRNPU-214ENST00000638475 HRCP23327 699 aa24.97■■□□□ 1.59
HNRNPU-214ENST00000638475 CFTRP13569 1480 aa24.95■■□□□ 1.58
HNRNPU-214ENST00000638475 NESP48681 1621 aa24.88■■□□□ 1.57
HNRNPU-214ENST00000638475 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
HNRNPU-214ENST00000638475 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
HNRNPU-214ENST00000638475 LAMC3Q9Y6N6 1575 aa24.74■■□□□ 1.55
HNRNPU-214ENST00000638475 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
HNRNPU-214ENST00000638475 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
HNRNPU-214ENST00000638475 PRDM2Q13029 1718 aa24.65■■□□□ 1.54
HNRNPU-214ENST00000638475 PDS5BQ9NTI5 1447 aa24.63■■□□□ 1.53
HNRNPU-214ENST00000638475 MYT1Q01538 1121 aa24.58■■□□□ 1.53
HNRNPU-214ENST00000638475 PPARGC1BQ86YN6 1023 aaKnown RBP24.57■■□□□ 1.52
HNRNPU-214ENST00000638475 SYNJ1O43426 1573 aa24.53■■□□□ 1.52
HNRNPU-214ENST00000638475 CEP164Q9UPV0 1460 aa24.53■■□□□ 1.52
HNRNPU-214ENST00000638475 CUX1P39880 1505 aa24.48■■□□□ 1.51
HNRNPU-214ENST00000638475 KIF21AQ7Z4S6 1674 aa24.48■■□□□ 1.51
HNRNPU-214ENST00000638475 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
HNRNPU-214ENST00000638475 ERCC6Q03468 1493 aa24.42■■□□□ 1.5
HNRNPU-214ENST00000638475 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
HNRNPU-214ENST00000638475 URB2Q14146 1524 aaKnown RBP24.37■■□□□ 1.49
HNRNPU-214ENST00000638475 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
HNRNPU-214ENST00000638475 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
HNRNPU-214ENST00000638475 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
HNRNPU-214ENST00000638475 MRC2Q9UBG0 1479 aa24.3■■□□□ 1.48
HNRNPU-214ENST00000638475 SOGA1O94964 1423 aa24.3■■□□□ 1.48
HNRNPU-214ENST00000638475 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
HNRNPU-214ENST00000638475 RUSC2Q8N2Y8 1516 aa24.23■■□□□ 1.47
HNRNPU-214ENST00000638475 POLA1P09884 1462 aaPredicted RBP24.22■■□□□ 1.47
HNRNPU-214ENST00000638475 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
HNRNPU-214ENST00000638475 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
HNRNPU-214ENST00000638475 WDR62O43379 1518 aa24.15■■□□□ 1.46
HNRNPU-214ENST00000638475 LOC105371045A0A1W2PR82 267 aa24.15■■□□□ 1.46
HNRNPU-214ENST00000638475 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
HNRNPU-214ENST00000638475 THOC2Q8NI27 1593 aaKnown RBP24.13■■□□□ 1.45
HNRNPU-214ENST00000638475 CSRNP3Q8WYN3 585 aa24.11■■□□□ 1.45
HNRNPU-214ENST00000638475 PCGF6Q9BYE7 350 aa24.1■■□□□ 1.45
HNRNPU-214ENST00000638475 CUX2O14529 1486 aa24.09■■□□□ 1.45
HNRNPU-214ENST00000638475 EEA1Q15075 1411 aa24.07■■□□□ 1.44
HNRNPU-214ENST00000638475 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
HNRNPU-214ENST00000638475 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
HNRNPU-214ENST00000638475 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
HNRNPU-214ENST00000638475 TARBP1Q13395 1621 aaKnown RBP23.98■■□□□ 1.43
HNRNPU-214ENST00000638475 IFT140Q96RY7 1462 aa23.95■■□□□ 1.42
HNRNPU-214ENST00000638475 IGF1RP08069 1367 aa23.93■■□□□ 1.42
HNRNPU-214ENST00000638475 AQRO60306 1485 aaKnown RBP eCLIP23.91■■□□□ 1.421e-7■■■■□ 22.9
HNRNPU-214ENST00000638475 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
HNRNPU-214ENST00000638475 WDR97A6NE52 1622 aa23.89■■□□□ 1.42
HNRNPU-214ENST00000638475 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
HNRNPU-214ENST00000638475 UBTFP17480 764 aaKnown RBP23.83■■□□□ 1.41
HNRNPU-214ENST00000638475 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
HNRNPU-214ENST00000638475 CARMIL1Q5VZK9 1371 aa23.8■■□□□ 1.4
HNRNPU-214ENST00000638475 PRXQ9BXM0 1461 aa23.79■■□□□ 1.4
HNRNPU-214ENST00000638475 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
HNRNPU-214ENST00000638475 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
HNRNPU-214ENST00000638475 KIF21BO75037 1637 aa23.74■■□□□ 1.39
HNRNPU-214ENST00000638475 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
HNRNPU-214ENST00000638475 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
HNRNPU-214ENST00000638475 GRIN2BQ13224 1484 aa23.72■■□□□ 1.39
HNRNPU-214ENST00000638475 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
HNRNPU-214ENST00000638475 TNIKQ9UKE5 1360 aa23.64■■□□□ 1.38
HNRNPU-214ENST00000638475 CUL7Q14999 1698 aa23.63■■□□□ 1.37
HNRNPU-214ENST00000638475 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
HNRNPU-214ENST00000638475 SNAPC4Q5SXM2 1469 aa23.62■■□□□ 1.37
HNRNPU-214ENST00000638475 FBLN2P98095 1184 aa23.6■■□□□ 1.37
HNRNPU-214ENST00000638475 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms