RNA–Protein interactions for RNA: ENST00000431815.5

THRB-209, Transcript of thyroid hormone receptor beta, humanhuman

TSL 1 (best)

Gene THRB, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRB-209ENST00000431815 NISCHQ9Y2I1 1504 aa19.43■□□□□ 0.7
THRB-209ENST00000431815 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
THRB-209ENST00000431815 ABCC9O60706 1549 aa16.65■□□□□ 0.26
THRB-209ENST00000431815 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
THRB-209ENST00000431815 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
THRB-209ENST00000431815 NACADO15069 1562 aa16.2■□□□□ 0.18
THRB-209ENST00000431815 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
THRB-209ENST00000431815 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
THRB-209ENST00000431815 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
THRB-209ENST00000431815 UNC13AQ9UPW8 1703 aa15.73■□□□□ 0.11
THRB-209ENST00000431815 BICRAQ9NZM4 1560 aa15.64■□□□□ 0.09
THRB-209ENST00000431815 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
THRB-209ENST00000431815 SHROOM4Q9ULL8 1493 aa15.61■□□□□ 0.09
THRB-209ENST00000431815 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
THRB-209ENST00000431815 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
THRB-209ENST00000431815 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
THRB-209ENST00000431815 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
THRB-209ENST00000431815 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
THRB-209ENST00000431815 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
THRB-209ENST00000431815 SMARCA4P51532 1647 aa15.03■□□□□ -0
THRB-209ENST00000431815 NCAPD3P42695 1498 aa14.96□□□□□ -0.01
THRB-209ENST00000431815 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
THRB-209ENST00000431815 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
THRB-209ENST00000431815 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
THRB-209ENST00000431815 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
THRB-209ENST00000431815 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
THRB-209ENST00000431815 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.03
THRB-209ENST00000431815 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
THRB-209ENST00000431815 WIZO95785 1651 aa14.75□□□□□ -0.05
THRB-209ENST00000431815 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
THRB-209ENST00000431815 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
THRB-209ENST00000431815 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
THRB-209ENST00000431815 CCDC88BA6NC98 1476 aa14.47□□□□□ -0.09
THRB-209ENST00000431815 NESP48681 1621 aa14.44□□□□□ -0.1
THRB-209ENST00000431815 CFTRP13569 1480 aa14.44□□□□□ -0.1
THRB-209ENST00000431815 SUPT5HO00267 1087 aaKnown RBP14.44□□□□□ -0.1
THRB-209ENST00000431815 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
THRB-209ENST00000431815 ERCC6Q03468 1493 aa14.37□□□□□ -0.11
THRB-209ENST00000431815 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
THRB-209ENST00000431815 FANCD2Q9BXW9 1451 aa14.3□□□□□ -0.12
THRB-209ENST00000431815 KIF21AQ7Z4S6 1674 aa14.28□□□□□ -0.12
THRB-209ENST00000431815 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
THRB-209ENST00000431815 CUX2O14529 1486 aa14.26□□□□□ -0.13
THRB-209ENST00000431815 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
THRB-209ENST00000431815 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
THRB-209ENST00000431815 WDR62O43379 1518 aa14.2□□□□□ -0.14
THRB-209ENST00000431815 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
THRB-209ENST00000431815 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
THRB-209ENST00000431815 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
THRB-209ENST00000431815 TOPBP1Q92547 1522 aa14.08□□□□□ -0.16
THRB-209ENST00000431815 IFT140Q96RY7 1462 aa14□□□□□ -0.17
THRB-209ENST00000431815 CUX1P39880 1505 aa14□□□□□ -0.17
THRB-209ENST00000431815 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
THRB-209ENST00000431815 POLA1P09884 1462 aaPredicted RBP13.97□□□□□ -0.17
THRB-209ENST00000431815 TOP2BQ02880 1626 aa13.94□□□□□ -0.18
THRB-209ENST00000431815 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
THRB-209ENST00000431815 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
THRB-209ENST00000431815 SOGA1O94964 1423 aa13.93□□□□□ -0.18
THRB-209ENST00000431815 TARBP1Q13395 1621 aaKnown RBP13.92□□□□□ -0.18
THRB-209ENST00000431815 WDR97A6NE52 1622 aa13.91□□□□□ -0.18
THRB-209ENST00000431815 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
THRB-209ENST00000431815 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
THRB-209ENST00000431815 ABCA10Q8WWZ4 1543 aa13.86□□□□□ -0.19
THRB-209ENST00000431815 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
THRB-209ENST00000431815 EIF4G3O43432 1585 aaKnown RBP13.81□□□□□ -0.2
THRB-209ENST00000431815 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.2
THRB-209ENST00000431815 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
THRB-209ENST00000431815 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
THRB-209ENST00000431815 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
THRB-209ENST00000431815 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
THRB-209ENST00000431815 MAGI1Q96QZ7 1491 aaPredicted RBP13.73□□□□□ -0.21
THRB-209ENST00000431815 TRIM41Q8WV44 630 aa13.71□□□□□ -0.21
THRB-209ENST00000431815 ERICH3Q5RHP9 1530 aa13.7□□□□□ -0.22
THRB-209ENST00000431815 KIF27Q86VH2 1401 aa13.7□□□□□ -0.22
THRB-209ENST00000431815 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
THRB-209ENST00000431815 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
THRB-209ENST00000431815 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
THRB-209ENST00000431815 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
THRB-209ENST00000431815 SYNJ2O15056 1496 aa13.66□□□□□ -0.22
THRB-209ENST00000431815 FHAD1B1AJZ9 1412 aa13.64□□□□□ -0.23
THRB-209ENST00000431815 IGF1RP08069 1367 aa13.63□□□□□ -0.23
THRB-209ENST00000431815 CHMP7Q8WUX9 453 aaPredicted RBP13.63□□□□□ -0.23
THRB-209ENST00000431815 CHIC1Q5VXU3 224 aa13.61□□□□□ -0.23
THRB-209ENST00000431815 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
THRB-209ENST00000431815 CHD1O14646 1710 aa13.59□□□□□ -0.23
THRB-209ENST00000431815 FBLN2P98095 1184 aa13.58□□□□□ -0.24
THRB-209ENST00000431815 CUL7Q14999 1698 aa13.58□□□□□ -0.24
THRB-209ENST00000431815 GRIN2AQ12879 1464 aa13.57□□□□□ -0.24
THRB-209ENST00000431815 EEA1Q15075 1411 aa13.56□□□□□ -0.24
THRB-209ENST00000431815 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
THRB-209ENST00000431815 NUP160Q12769 1436 aa13.54□□□□□ -0.24
THRB-209ENST00000431815 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
THRB-209ENST00000431815 CLASP1Q7Z460 1538 aa13.51□□□□□ -0.25
THRB-209ENST00000431815 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
THRB-209ENST00000431815 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
THRB-209ENST00000431815 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
THRB-209ENST00000431815 CEP170Q5SW79 1584 aa13.46□□□□□ -0.25
THRB-209ENST00000431815 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
THRB-209ENST00000431815 ARHGEF11O15085 1522 aa13.41□□□□□ -0.26
THRB-209ENST00000431815 SHROOM2Q13796 1616 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms