RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 NISCHQ9Y2I1 1504 aa41.34■■■■■ 4.21
CSNK1D-225ENST00000584913 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
CSNK1D-225ENST00000584913 ABCC9O60706 1549 aa36.13■■■■□ 3.38
CSNK1D-225ENST00000584913 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
CSNK1D-225ENST00000584913 NACADO15069 1562 aa34.8■■■■□ 3.16
CSNK1D-225ENST00000584913 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
CSNK1D-225ENST00000584913 ZCCHC6Q5VYS8 1495 aaKnown RBP34.42■■■■□ 3.1
CSNK1D-225ENST00000584913 DCAF1Q9Y4B6 1507 aa34.36■■■■□ 3.09
CSNK1D-225ENST00000584913 DCAF8L2P0C7V8 631 aa34.27■■■■□ 3.08
CSNK1D-225ENST00000584913 UNC13AQ9UPW8 1703 aa33.97■■■■□ 3.03
CSNK1D-225ENST00000584913 BICRAQ9NZM4 1560 aa33.75■■■□□ 2.99
CSNK1D-225ENST00000584913 SHROOM4Q9ULL8 1493 aa33.65■■■□□ 2.98
CSNK1D-225ENST00000584913 PABPN1Q86U42 306 aaKnown RBP eCLIP33.61■■■□□ 2.97
CSNK1D-225ENST00000584913 SCRIBQ14160 1630 aa33.5■■■□□ 2.95
CSNK1D-225ENST00000584913 DNAJC5BQ9UF47 199 aa33.29■■■□□ 2.92
CSNK1D-225ENST00000584913 EIF4G1Q04637 1599 aaKnown RBP32.89■■■□□ 2.86
CSNK1D-225ENST00000584913 CC2D2AQ9P2K1 1620 aa32.77■■■□□ 2.84
CSNK1D-225ENST00000584913 CECR2Q9BXF3 1484 aa32.58■■■□□ 2.81
CSNK1D-225ENST00000584913 SMARCA4P51532 1647 aa32.13■■■□□ 2.73
CSNK1D-225ENST00000584913 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
CSNK1D-225ENST00000584913 NCAPD3P42695 1498 aa32.09■■■□□ 2.73
CSNK1D-225ENST00000584913 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
CSNK1D-225ENST00000584913 ATAD2BQ9ULI0 1458 aa31.99■■■□□ 2.71
CSNK1D-225ENST00000584913 HMGXB3Q12766 1538 aa31.95■■■□□ 2.71
CSNK1D-225ENST00000584913 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
CSNK1D-225ENST00000584913 MROH2BQ7Z745 1585 aa31.77■■■□□ 2.68
CSNK1D-225ENST00000584913 BAZ1BQ9UIG0 1483 aaKnown RBP31.72■■■□□ 2.67
CSNK1D-225ENST00000584913 WIZO95785 1651 aa31.38■■■□□ 2.61
CSNK1D-225ENST00000584913 RSF1Q96T23 1441 aaPredicted RBP31.34■■■□□ 2.61
CSNK1D-225ENST00000584913 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
CSNK1D-225ENST00000584913 ERCC6Q03468 1493 aa31.22■■■□□ 2.59
CSNK1D-225ENST00000584913 NESP48681 1621 aa31.19■■■□□ 2.58
CSNK1D-225ENST00000584913 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
CSNK1D-225ENST00000584913 CUX2O14529 1486 aa31.14■■■□□ 2.58
CSNK1D-225ENST00000584913 CADPSQ9ULU8 1353 aa31.07■■■□□ 2.56
CSNK1D-225ENST00000584913 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
CSNK1D-225ENST00000584913 THOC2Q8NI27 1593 aaKnown RBP30.94■■■□□ 2.54
CSNK1D-225ENST00000584913 KIF21AQ7Z4S6 1674 aa30.89■■■□□ 2.54
CSNK1D-225ENST00000584913 CFTRP13569 1480 aa30.89■■■□□ 2.53
CSNK1D-225ENST00000584913 MRC2Q9UBG0 1479 aa30.73■■■□□ 2.51
CSNK1D-225ENST00000584913 CEP164Q9UPV0 1460 aa30.71■■■□□ 2.51
CSNK1D-225ENST00000584913 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.51
CSNK1D-225ENST00000584913 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.5
CSNK1D-225ENST00000584913 WDR62O43379 1518 aa30.68■■■□□ 2.5
CSNK1D-225ENST00000584913 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
CSNK1D-225ENST00000584913 URB2Q14146 1524 aaKnown RBP30.38■■■□□ 2.45
CSNK1D-225ENST00000584913 DNAJC5Q9H3Z4 198 aa30.32■■■□□ 2.44
CSNK1D-225ENST00000584913 ABCC8Q09428 1581 aa30.29■■■□□ 2.44
CSNK1D-225ENST00000584913 TOPBP1Q92547 1522 aa30.18■■■□□ 2.42
CSNK1D-225ENST00000584913 DNMBPQ6XZF7 1577 aa30.18■■■□□ 2.42
CSNK1D-225ENST00000584913 SUPT5HO00267 1087 aaKnown RBP30.11■■■□□ 2.41
CSNK1D-225ENST00000584913 IFT140Q96RY7 1462 aa30.11■■■□□ 2.41
CSNK1D-225ENST00000584913 POLA1P09884 1462 aaPredicted RBP29.91■■■□□ 2.38
CSNK1D-225ENST00000584913 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
CSNK1D-225ENST00000584913 ZNF608Q9ULD9 1512 aaPredicted RBP29.85■■■□□ 2.37
CSNK1D-225ENST00000584913 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
CSNK1D-225ENST00000584913 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
CSNK1D-225ENST00000584913 CUX1P39880 1505 aa29.83■■■□□ 2.37
CSNK1D-225ENST00000584913 FGD5Q6ZNL6 1462 aa29.78■■■□□ 2.36
CSNK1D-225ENST00000584913 SOGA1O94964 1423 aa29.74■■■□□ 2.35
CSNK1D-225ENST00000584913 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
CSNK1D-225ENST00000584913 OSCARQ8IYS5 282 aa29.65■■■□□ 2.34
CSNK1D-225ENST00000584913 AQRO60306 1485 aaKnown RBP eCLIP29.63■■■□□ 2.331e-7■■■■□ 20.4
CSNK1D-225ENST00000584913 BIVM-ERCC5R4GMW8 1640 aa29.61■■■□□ 2.33
CSNK1D-225ENST00000584913 TOP2BQ02880 1626 aa29.6■■■□□ 2.33
CSNK1D-225ENST00000584913 WRNQ14191 1432 aaPredicted RBP eCLIP29.58■■■□□ 2.33
CSNK1D-225ENST00000584913 ABCA10Q8WWZ4 1543 aa29.56■■■□□ 2.32
CSNK1D-225ENST00000584913 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
CSNK1D-225ENST00000584913 GRIN2BQ13224 1484 aa29.5■■■□□ 2.31
CSNK1D-225ENST00000584913 MAGI1Q96QZ7 1491 aaPredicted RBP29.49■■■□□ 2.31
CSNK1D-225ENST00000584913 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
CSNK1D-225ENST00000584913 ABCA5Q8WWZ7 1642 aa29.47■■■□□ 2.31
CSNK1D-225ENST00000584913 CHD1O14646 1710 aa29.45■■■□□ 2.3
CSNK1D-225ENST00000584913 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
CSNK1D-225ENST00000584913 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
CSNK1D-225ENST00000584913 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
CSNK1D-225ENST00000584913 SYNJ2O15056 1496 aa29.35■■■□□ 2.29
CSNK1D-225ENST00000584913 ERICH3Q5RHP9 1530 aa29.24■■■□□ 2.27
CSNK1D-225ENST00000584913 RIMBP3CA6NJZ7 1639 aa29.23■■■□□ 2.27
CSNK1D-225ENST00000584913 RIMBP3BA6NNM3 1639 aa29.23■■■□□ 2.27
CSNK1D-225ENST00000584913 RIMBP3Q9UFD9 1639 aa29.23■■■□□ 2.27
CSNK1D-225ENST00000584913 ARHGEF11O15085 1522 aa29.23■■■□□ 2.27
CSNK1D-225ENST00000584913 CLASP1Q7Z460 1538 aa29.22■■■□□ 2.27
CSNK1D-225ENST00000584913 FBLN2P98095 1184 aa29.22■■■□□ 2.27
CSNK1D-225ENST00000584913 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
CSNK1D-225ENST00000584913 ADAMTS12P58397 1594 aa29.19■■■□□ 2.26
CSNK1D-225ENST00000584913 FHAD1B1AJZ9 1412 aa29.12■■■□□ 2.25
CSNK1D-225ENST00000584913 GRIN2AQ12879 1464 aa29.1■■■□□ 2.25
CSNK1D-225ENST00000584913 NUP160Q12769 1436 aa29.03■■■□□ 2.24
CSNK1D-225ENST00000584913 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
CSNK1D-225ENST00000584913 KIF27Q86VH2 1401 aa29■■■□□ 2.23
CSNK1D-225ENST00000584913 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
CSNK1D-225ENST00000584913 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
CSNK1D-225ENST00000584913 CUL7Q14999 1698 aa28.93■■■□□ 2.22
CSNK1D-225ENST00000584913 SHROOM2Q13796 1616 aa28.87■■■□□ 2.21
CSNK1D-225ENST00000584913 IGF1RP08069 1367 aa28.86■■■□□ 2.21
CSNK1D-225ENST00000584913 CYB5RLQ6IPT4 315 aa28.79■■■□□ 2.2
CSNK1D-225ENST00000584913 RUSC2Q8N2Y8 1516 aa28.77■■■□□ 2.2
CSNK1D-225ENST00000584913 KIAA0586Q9BVV6 1533 aa28.68■■■□□ 2.18
CSNK1D-225ENST00000584913 CARMIL1Q5VZK9 1371 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms