RNA–Protein interactions for RNA: ENST00000528604.5

MVB12A-205, Transcript of multivesicular body subunit 12A, humanhuman

TSL 3

Gene MVB12A, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-205ENST00000528604 NISCHQ9Y2I1 1504 aa28.37■■■□□ 2.13
MVB12A-205ENST00000528604 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.63
MVB12A-205ENST00000528604 ABCC9O60706 1549 aa24.96■■□□□ 1.59
MVB12A-205ENST00000528604 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
MVB12A-205ENST00000528604 DCAF8L2P0C7V8 631 aa23.85■■□□□ 1.41
MVB12A-205ENST00000528604 NACADO15069 1562 aa23.82■■□□□ 1.4
MVB12A-205ENST00000528604 MYO15BQ96JP2 1530 aa23.61■■□□□ 1.37
MVB12A-205ENST00000528604 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
MVB12A-205ENST00000528604 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
MVB12A-205ENST00000528604 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
MVB12A-205ENST00000528604 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
MVB12A-205ENST00000528604 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
MVB12A-205ENST00000528604 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
MVB12A-205ENST00000528604 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
MVB12A-205ENST00000528604 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
MVB12A-205ENST00000528604 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
MVB12A-205ENST00000528604 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
MVB12A-205ENST00000528604 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
MVB12A-205ENST00000528604 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
MVB12A-205ENST00000528604 NCAPD3P42695 1498 aa22■■□□□ 1.11
MVB12A-205ENST00000528604 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
MVB12A-205ENST00000528604 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
MVB12A-205ENST00000528604 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
MVB12A-205ENST00000528604 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
MVB12A-205ENST00000528604 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
MVB12A-205ENST00000528604 PEG3Q9GZU2 1588 aa21.81■■□□□ 1.08
MVB12A-205ENST00000528604 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
MVB12A-205ENST00000528604 WIZO95785 1651 aa21.6■■□□□ 1.05
MVB12A-205ENST00000528604 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
MVB12A-205ENST00000528604 NESP48681 1621 aa21.55■■□□□ 1.04
MVB12A-205ENST00000528604 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
MVB12A-205ENST00000528604 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
MVB12A-205ENST00000528604 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
MVB12A-205ENST00000528604 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
MVB12A-205ENST00000528604 CUX2O14529 1486 aa21.35■■□□□ 1.01
MVB12A-205ENST00000528604 PDS5BQ9NTI5 1447 aa21.32■■□□□ 1
MVB12A-205ENST00000528604 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
MVB12A-205ENST00000528604 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
MVB12A-205ENST00000528604 CFTRP13569 1480 aa21.19■□□□□ 0.98
MVB12A-205ENST00000528604 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
MVB12A-205ENST00000528604 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
MVB12A-205ENST00000528604 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
MVB12A-205ENST00000528604 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
MVB12A-205ENST00000528604 WDR62O43379 1518 aa21.03■□□□□ 0.96
MVB12A-205ENST00000528604 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
MVB12A-205ENST00000528604 SUPT5HO00267 1087 aaKnown RBP20.91■□□□□ 0.94
MVB12A-205ENST00000528604 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
MVB12A-205ENST00000528604 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
MVB12A-205ENST00000528604 TOPBP1Q92547 1522 aa20.74■□□□□ 0.91
MVB12A-205ENST00000528604 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
MVB12A-205ENST00000528604 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
MVB12A-205ENST00000528604 IFT140Q96RY7 1462 aa20.66■□□□□ 0.9
MVB12A-205ENST00000528604 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
MVB12A-205ENST00000528604 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
MVB12A-205ENST00000528604 TARBP1Q13395 1621 aaKnown RBP20.52■□□□□ 0.88
MVB12A-205ENST00000528604 CUX1P39880 1505 aa20.52■□□□□ 0.87
MVB12A-205ENST00000528604 SOGA1O94964 1423 aa20.49■□□□□ 0.87
MVB12A-205ENST00000528604 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
MVB12A-205ENST00000528604 RAD54L2Q9Y4B4 1467 aa20.49■□□□□ 0.87
MVB12A-205ENST00000528604 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
MVB12A-205ENST00000528604 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
MVB12A-205ENST00000528604 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.877e-8■■■■□ 23.6
MVB12A-205ENST00000528604 TDRD9Q8NDG6 1382 aaKnown RBP20.41■□□□□ 0.86
MVB12A-205ENST00000528604 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.849e-6■■■■■ 50.1
MVB12A-205ENST00000528604 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
MVB12A-205ENST00000528604 FBLN2P98095 1184 aa20.29■□□□□ 0.84
MVB12A-205ENST00000528604 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
MVB12A-205ENST00000528604 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
MVB12A-205ENST00000528604 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
MVB12A-205ENST00000528604 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
MVB12A-205ENST00000528604 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
MVB12A-205ENST00000528604 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
MVB12A-205ENST00000528604 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
MVB12A-205ENST00000528604 CHD1O14646 1710 aa20.22■□□□□ 0.83
MVB12A-205ENST00000528604 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
MVB12A-205ENST00000528604 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
MVB12A-205ENST00000528604 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
MVB12A-205ENST00000528604 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
MVB12A-205ENST00000528604 SYNJ2O15056 1496 aa20.15■□□□□ 0.82
MVB12A-205ENST00000528604 PBRM1Q86U86 1689 aa20.15■□□□□ 0.82
MVB12A-205ENST00000528604 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
MVB12A-205ENST00000528604 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
MVB12A-205ENST00000528604 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
MVB12A-205ENST00000528604 ARHGEF11O15085 1522 aa20.11■□□□□ 0.81
MVB12A-205ENST00000528604 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
MVB12A-205ENST00000528604 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.79
MVB12A-205ENST00000528604 ADAMTS12P58397 1594 aa20.01■□□□□ 0.79
MVB12A-205ENST00000528604 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
MVB12A-205ENST00000528604 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
MVB12A-205ENST00000528604 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
MVB12A-205ENST00000528604 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
MVB12A-205ENST00000528604 NUP160Q12769 1436 aa19.92■□□□□ 0.78
MVB12A-205ENST00000528604 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
MVB12A-205ENST00000528604 CEP170Q5SW79 1584 aa19.89■□□□□ 0.77
MVB12A-205ENST00000528604 IGF1RP08069 1367 aa19.87■□□□□ 0.77
MVB12A-205ENST00000528604 CUL7Q14999 1698 aa19.78■□□□□ 0.76
MVB12A-205ENST00000528604 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
MVB12A-205ENST00000528604 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
MVB12A-205ENST00000528604 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
MVB12A-205ENST00000528604 JPH4Q96JJ6 628 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms