RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 NISCHQ9Y2I1 1504 aa30.91■■■□□ 2.54
CSNK1D-206ENST00000577578 CCDC180Q9P1Z9 1646 aa27.66■■■□□ 2.02
CSNK1D-206ENST00000577578 ABCC9O60706 1549 aa27.21■■□□□ 1.95
CSNK1D-206ENST00000577578 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
CSNK1D-206ENST00000577578 NACADO15069 1562 aa26.04■■□□□ 1.76
CSNK1D-206ENST00000577578 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
CSNK1D-206ENST00000577578 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
CSNK1D-206ENST00000577578 ZCCHC6Q5VYS8 1495 aaKnown RBP25.71■■□□□ 1.71
CSNK1D-206ENST00000577578 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
CSNK1D-206ENST00000577578 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
CSNK1D-206ENST00000577578 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
CSNK1D-206ENST00000577578 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.653e-7■■■□□ 17.8
CSNK1D-206ENST00000577578 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
CSNK1D-206ENST00000577578 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
CSNK1D-206ENST00000577578 SHROOM4Q9ULL8 1493 aa25.11■■□□□ 1.61
CSNK1D-206ENST00000577578 EIF4G1Q04637 1599 aaKnown RBP24.7■■□□□ 1.54
CSNK1D-206ENST00000577578 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
CSNK1D-206ENST00000577578 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
CSNK1D-206ENST00000577578 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
CSNK1D-206ENST00000577578 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
CSNK1D-206ENST00000577578 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
CSNK1D-206ENST00000577578 BAZ1AQ9NRL2 1556 aaPredicted RBP23.98■■□□□ 1.43
CSNK1D-206ENST00000577578 SMARCA2P51531 1590 aa23.94■■□□□ 1.42
CSNK1D-206ENST00000577578 HMGXB3Q12766 1538 aa23.89■■□□□ 1.42
CSNK1D-206ENST00000577578 PEG3Q9GZU2 1588 aa23.87■■□□□ 1.41
CSNK1D-206ENST00000577578 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
CSNK1D-206ENST00000577578 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
CSNK1D-206ENST00000577578 WIZO95785 1651 aa23.52■■□□□ 1.36
CSNK1D-206ENST00000577578 NESP48681 1621 aa23.48■■□□□ 1.35
CSNK1D-206ENST00000577578 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
CSNK1D-206ENST00000577578 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
CSNK1D-206ENST00000577578 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
CSNK1D-206ENST00000577578 CUX2O14529 1486 aa23.39■■□□□ 1.34
CSNK1D-206ENST00000577578 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
CSNK1D-206ENST00000577578 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
CSNK1D-206ENST00000577578 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
CSNK1D-206ENST00000577578 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
CSNK1D-206ENST00000577578 KIF21AQ7Z4S6 1674 aa23.24■■□□□ 1.31
CSNK1D-206ENST00000577578 CFTRP13569 1480 aa23.11■■□□□ 1.29
CSNK1D-206ENST00000577578 MRC2Q9UBG0 1479 aa23.04■■□□□ 1.28
CSNK1D-206ENST00000577578 WDR62O43379 1518 aa23.01■■□□□ 1.27
CSNK1D-206ENST00000577578 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
CSNK1D-206ENST00000577578 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
CSNK1D-206ENST00000577578 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
CSNK1D-206ENST00000577578 DNAJC5Q9H3Z4 198 aa22.97■■□□□ 1.27
CSNK1D-206ENST00000577578 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
CSNK1D-206ENST00000577578 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-206ENST00000577578 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
CSNK1D-206ENST00000577578 TOPBP1Q92547 1522 aa22.62■■□□□ 1.21
CSNK1D-206ENST00000577578 DNMBPQ6XZF7 1577 aa22.58■■□□□ 1.2
CSNK1D-206ENST00000577578 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
CSNK1D-206ENST00000577578 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-206ENST00000577578 ZNF608Q9ULD9 1512 aaPredicted RBP22.45■■□□□ 1.18
CSNK1D-206ENST00000577578 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
CSNK1D-206ENST00000577578 POLA1P09884 1462 aaPredicted RBP22.41■■□□□ 1.18
CSNK1D-206ENST00000577578 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
CSNK1D-206ENST00000577578 CUX1P39880 1505 aa22.34■■□□□ 1.17
CSNK1D-206ENST00000577578 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
CSNK1D-206ENST00000577578 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
CSNK1D-206ENST00000577578 SOGA1O94964 1423 aa22.28■■□□□ 1.16
CSNK1D-206ENST00000577578 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
CSNK1D-206ENST00000577578 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.167e-8■■■■■ 28.6
CSNK1D-206ENST00000577578 WDR97A6NE52 1622 aa22.26■■□□□ 1.15
CSNK1D-206ENST00000577578 TDRD9Q8NDG6 1382 aaKnown RBP22.17■■□□□ 1.14
CSNK1D-206ENST00000577578 CHD1O14646 1710 aa22.15■■□□□ 1.14
CSNK1D-206ENST00000577578 BIVM-ERCC5R4GMW8 1640 aa22.11■■□□□ 1.13
CSNK1D-206ENST00000577578 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
CSNK1D-206ENST00000577578 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
CSNK1D-206ENST00000577578 GRIN2BQ13224 1484 aa22.08■■□□□ 1.12
CSNK1D-206ENST00000577578 WRNQ14191 1432 aaPredicted RBP eCLIP22.07■■□□□ 1.12
CSNK1D-206ENST00000577578 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
CSNK1D-206ENST00000577578 MAGI1Q96QZ7 1491 aaPredicted RBP22.07■■□□□ 1.12
CSNK1D-206ENST00000577578 SYNJ1O43426 1573 aa22.06■■□□□ 1.12
CSNK1D-206ENST00000577578 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
CSNK1D-206ENST00000577578 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
CSNK1D-206ENST00000577578 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
CSNK1D-206ENST00000577578 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.12
CSNK1D-206ENST00000577578 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.12
CSNK1D-206ENST00000577578 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.12
CSNK1D-206ENST00000577578 ARHGEF11O15085 1522 aa22■■□□□ 1.11
CSNK1D-206ENST00000577578 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
CSNK1D-206ENST00000577578 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
CSNK1D-206ENST00000577578 FBLN2P98095 1184 aa21.97■■□□□ 1.11
CSNK1D-206ENST00000577578 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
CSNK1D-206ENST00000577578 CHMP7Q8WUX9 453 aaPredicted RBP21.91■■□□□ 1.1
CSNK1D-206ENST00000577578 ADAMTS12P58397 1594 aa21.85■■□□□ 1.09
CSNK1D-206ENST00000577578 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.09
CSNK1D-206ENST00000577578 GRIN2AQ12879 1464 aa21.8■■□□□ 1.08
CSNK1D-206ENST00000577578 ARAP1Q96P48 1450 aa21.79■■□□□ 1.08
CSNK1D-206ENST00000577578 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.08
CSNK1D-206ENST00000577578 NUP160Q12769 1436 aa21.74■■□□□ 1.07
CSNK1D-206ENST00000577578 CYB5RLQ6IPT4 315 aa21.73■■□□□ 1.07
CSNK1D-206ENST00000577578 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
CSNK1D-206ENST00000577578 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
CSNK1D-206ENST00000577578 SHROOM2Q13796 1616 aa21.63■■□□□ 1.05
CSNK1D-206ENST00000577578 IGF1RP08069 1367 aa21.59■■□□□ 1.05
CSNK1D-206ENST00000577578 CUL7Q14999 1698 aa21.58■■□□□ 1.05
CSNK1D-206ENST00000577578 ERCC6L2Q5T890 1561 aa21.57■■□□□ 1.04
CSNK1D-206ENST00000577578 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
CSNK1D-206ENST00000577578 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms