RNA–Protein interactions for RNA: ENST00000466014.5

WIPI2-206, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 1 (best)

Gene WIPI2, Length 1,700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-206ENST00000466014 NISCHQ9Y2I1 1504 aa53.03■■■■■ 6.08
WIPI2-206ENST00000466014 CCDC180Q9P1Z9 1646 aa46.53■■■■■ 5.04
WIPI2-206ENST00000466014 ZCCHC6Q5VYS8 1495 aaKnown RBP44.46■■■■■ 4.71
WIPI2-206ENST00000466014 ABCC9O60706 1549 aa44.36■■■■■ 4.69
WIPI2-206ENST00000466014 DCAF1Q9Y4B6 1507 aa43.91■■■■■ 4.62
WIPI2-206ENST00000466014 DCAF8L2P0C7V8 631 aa43.82■■■■■ 4.61
WIPI2-206ENST00000466014 MYO15BQ96JP2 1530 aa43.61■■■■■ 4.57
WIPI2-206ENST00000466014 NACADO15069 1562 aa43.46■■■■■ 4.55
WIPI2-206ENST00000466014 RB1CC1Q8TDY2 1594 aa43.19■■■■■ 4.5
WIPI2-206ENST00000466014 SHROOM4Q9ULL8 1493 aa42.75■■■■■ 4.43
WIPI2-206ENST00000466014 SCRIBQ14160 1630 aa42.63■■■■■ 4.41
WIPI2-206ENST00000466014 UNC13AQ9UPW8 1703 aa42.26■■■■■ 4.36
WIPI2-206ENST00000466014 BICRAQ9NZM4 1560 aa41.88■■■■■ 4.29
WIPI2-206ENST00000466014 PABPN1Q86U42 306 aaKnown RBP eCLIP41.69■■■■■ 4.27
WIPI2-206ENST00000466014 CECR2Q9BXF3 1484 aa41.2■■■■■ 4.19
WIPI2-206ENST00000466014 BAZ1AQ9NRL2 1556 aaPredicted RBP41■■■■■ 4.15
WIPI2-206ENST00000466014 MROH2BQ7Z745 1585 aa40.92■■■■■ 4.14
WIPI2-206ENST00000466014 RSF1Q96T23 1441 aaPredicted RBP40.92■■■■■ 4.14
WIPI2-206ENST00000466014 SUPT5HO00267 1087 aaKnown RBP40.89■■■■■ 4.14
WIPI2-206ENST00000466014 SMARCA4P51532 1647 aa40.87■■■■■ 4.13
WIPI2-206ENST00000466014 EIF4G1Q04637 1599 aaKnown RBP40.66■■■■■ 4.1
WIPI2-206ENST00000466014 WIZO95785 1651 aa40.55■■■■■ 4.08
WIPI2-206ENST00000466014 PEG3Q9GZU2 1588 aa40.45■■■■■ 4.07
WIPI2-206ENST00000466014 ATAD2BQ9ULI0 1458 aa40.33■■■■■ 4.05
WIPI2-206ENST00000466014 SMARCA2P51531 1590 aa40.32■■■■■ 4.04
WIPI2-206ENST00000466014 CC2D2AQ9P2K1 1620 aa40.17■■■■■ 4.02
WIPI2-206ENST00000466014 TOP2AP11388 1531 aaKnown RBP40.16■■■■■ 4.02
WIPI2-206ENST00000466014 NCAPD3P42695 1498 aa40.1■■■■■ 4.01
WIPI2-206ENST00000466014 BAZ1BQ9UIG0 1483 aaKnown RBP40.06■■■■■ 4
WIPI2-206ENST00000466014 HMGXB3Q12766 1538 aa40.01■■■■■ 4
WIPI2-206ENST00000466014 CCDC88BA6NC98 1476 aa39.71■■■■□ 3.95
WIPI2-206ENST00000466014 DNAJC5BQ9UF47 199 aa39.57■■■■□ 3.93
WIPI2-206ENST00000466014 CFTRP13569 1480 aa39.06■■■■□ 3.84
WIPI2-206ENST00000466014 CADPSQ9ULU8 1353 aa39.01■■■■□ 3.84
WIPI2-206ENST00000466014 CHIC1Q5VXU3 224 aa38.92■■■■□ 3.82
WIPI2-206ENST00000466014 PRDM2Q13029 1718 aa38.84■■■■□ 3.81
WIPI2-206ENST00000466014 LAMC3Q9Y6N6 1575 aa38.82■■■■□ 3.81
WIPI2-206ENST00000466014 NESP48681 1621 aa38.78■■■■□ 3.8
WIPI2-206ENST00000466014 ABCC8Q09428 1581 aa38.67■■■■□ 3.78
WIPI2-206ENST00000466014 FANCD2Q9BXW9 1451 aa38.56■■■■□ 3.76
WIPI2-206ENST00000466014 TRIM41Q8WV44 630 aa38.53■■■■□ 3.76
WIPI2-206ENST00000466014 WRNQ14191 1432 aaPredicted RBP eCLIP38.53■■■■□ 3.76
WIPI2-206ENST00000466014 PDS5BQ9NTI5 1447 aa38.52■■■■□ 3.76
WIPI2-206ENST00000466014 CEP164Q9UPV0 1460 aa38.39■■■■□ 3.74
WIPI2-206ENST00000466014 SYNJ1O43426 1573 aa38.38■■■■□ 3.74
WIPI2-206ENST00000466014 KIF21AQ7Z4S6 1674 aa38.34■■■■□ 3.73
WIPI2-206ENST00000466014 CUX1P39880 1505 aa38.3■■■■□ 3.72
WIPI2-206ENST00000466014 TOP2BQ02880 1626 aa38.3■■■■□ 3.72
WIPI2-206ENST00000466014 BIVM-ERCC5R4GMW8 1640 aa38.28■■■■□ 3.72
WIPI2-206ENST00000466014 DNMBPQ6XZF7 1577 aa38.15■■■■□ 3.7
WIPI2-206ENST00000466014 URB2Q14146 1524 aaKnown RBP38.11■■■■□ 3.69
WIPI2-206ENST00000466014 ERCC6Q03468 1493 aa38.1■■■■□ 3.69
WIPI2-206ENST00000466014 TOPBP1Q92547 1522 aa38.1■■■■□ 3.69
WIPI2-206ENST00000466014 MRC2Q9UBG0 1479 aa38.05■■■■□ 3.68
WIPI2-206ENST00000466014 FGD5Q6ZNL6 1462 aa37.96■■■■□ 3.67
WIPI2-206ENST00000466014 WDR62O43379 1518 aa37.89■■■■□ 3.66
WIPI2-206ENST00000466014 THOC2Q8NI27 1593 aaKnown RBP37.88■■■■□ 3.65
WIPI2-206ENST00000466014 POLA1P09884 1462 aaPredicted RBP37.87■■■■□ 3.65
WIPI2-206ENST00000466014 SOGA1O94964 1423 aa37.84■■■■□ 3.65
WIPI2-206ENST00000466014 EEA1Q15075 1411 aa37.74■■■■□ 3.63
WIPI2-206ENST00000466014 FAM9AQ8IZU1 332 aaPredicted RBP37.74■■■■□ 3.63
WIPI2-206ENST00000466014 RUSC2Q8N2Y8 1516 aa37.73■■■■□ 3.63
WIPI2-206ENST00000466014 RAD54L2Q9Y4B4 1467 aa37.71■■■■□ 3.63
WIPI2-206ENST00000466014 ABCA10Q8WWZ4 1543 aa37.65■■■■□ 3.62
WIPI2-206ENST00000466014 CUX2O14529 1486 aa37.62■■■■□ 3.61
WIPI2-206ENST00000466014 KIF27Q86VH2 1401 aa37.62■■■■□ 3.61
WIPI2-206ENST00000466014 WDR97A6NE52 1622 aa37.58■■■■□ 3.61
WIPI2-206ENST00000466014 TARBP1Q13395 1621 aaKnown RBP37.58■■■■□ 3.61
WIPI2-206ENST00000466014 CSRNP3Q8WYN3 585 aa37.53■■■■□ 3.6
WIPI2-206ENST00000466014 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
WIPI2-206ENST00000466014 ABCA5Q8WWZ7 1642 aa37.39■■■■□ 3.58
WIPI2-206ENST00000466014 TDRD9Q8NDG6 1382 aaKnown RBP37.38■■■■□ 3.57
WIPI2-206ENST00000466014 LOC105371045A0A1W2PR82 267 aa37.36■■■■□ 3.57
WIPI2-206ENST00000466014 IGF1RP08069 1367 aa37.33■■■■□ 3.57
WIPI2-206ENST00000466014 GAPVD1Q14C86 1478 aa37.31■■■■□ 3.56
WIPI2-206ENST00000466014 ZNF608Q9ULD9 1512 aaPredicted RBP37.28■■■■□ 3.56
WIPI2-206ENST00000466014 KIF21BO75037 1637 aa37.27■■■■□ 3.56
WIPI2-206ENST00000466014 PRXQ9BXM0 1461 aa37.24■■■■□ 3.55
WIPI2-206ENST00000466014 AQRO60306 1485 aaKnown RBP eCLIP37.24■■■■□ 3.553e-6■■■■□ 24.1
WIPI2-206ENST00000466014 ERICH3Q5RHP9 1530 aa37.21■■■■□ 3.55
WIPI2-206ENST00000466014 EIF4G3O43432 1585 aaKnown RBP37.17■■■■□ 3.54
WIPI2-206ENST00000466014 GOLGA3Q08378 1498 aa37.17■■■■□ 3.54
WIPI2-206ENST00000466014 EHMT2Q96KQ7 1210 aa37.16■■■■□ 3.54
WIPI2-206ENST00000466014 PBRM1Q86U86 1689 aa37.14■■■■□ 3.54
WIPI2-206ENST00000466014 CARMIL1Q5VZK9 1371 aa37.13■■■■□ 3.53
WIPI2-206ENST00000466014 GRIN2BQ13224 1484 aa37.12■■■■□ 3.53
WIPI2-206ENST00000466014 CUL7Q14999 1698 aa37.12■■■■□ 3.53
WIPI2-206ENST00000466014 RAPGEF2Q9Y4G8 1499 aa37.11■■■■□ 3.53
WIPI2-206ENST00000466014 UBTFP17480 764 aaKnown RBP36.96■■■■□ 3.51
WIPI2-206ENST00000466014 TNIKQ9UKE5 1360 aa36.95■■■■□ 3.51
WIPI2-206ENST00000466014 ADAMTS12P58397 1594 aa36.93■■■■□ 3.5
WIPI2-206ENST00000466014 FHAD1B1AJZ9 1412 aa36.92■■■■□ 3.5
WIPI2-206ENST00000466014 SNAPC4Q5SXM2 1469 aa36.91■■■■□ 3.5
WIPI2-206ENST00000466014 MAGI1Q96QZ7 1491 aaPredicted RBP36.88■■■■□ 3.49
WIPI2-206ENST00000466014 SYNJ2O15056 1496 aa36.73■■■■□ 3.47
WIPI2-206ENST00000466014 CEP162Q5TB80 1403 aa36.68■■■■□ 3.46
WIPI2-206ENST00000466014 GRIN2AQ12879 1464 aa36.65■■■■□ 3.46
WIPI2-206ENST00000466014 CHMP7Q8WUX9 453 aaPredicted RBP36.62■■■■□ 3.45
WIPI2-206ENST00000466014 CTTNBP2Q8WZ74 1663 aa36.6■■■■□ 3.45
WIPI2-206ENST00000466014 CLIP1P30622 1438 aa36.53■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms