RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 NISCHQ9Y2I1 1504 aa15.28■□□□□ 0.04
HNRNPU-222ENST00000639880 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
HNRNPU-222ENST00000639880 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
HNRNPU-222ENST00000639880 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
HNRNPU-222ENST00000639880 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
HNRNPU-222ENST00000639880 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
HNRNPU-222ENST00000639880 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.25
HNRNPU-222ENST00000639880 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
HNRNPU-222ENST00000639880 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
HNRNPU-222ENST00000639880 TTBK1Q5TCY1 1321 aaPredicted RBP13.21□□□□□ -0.29
HNRNPU-222ENST00000639880 LOC105371045A0A1W2PR82 267 aa13.17□□□□□ -0.3
HNRNPU-222ENST00000639880 HRCP23327 699 aa13.1□□□□□ -0.31
HNRNPU-222ENST00000639880 PPARGC1BQ86YN6 1023 aaKnown RBP13.05□□□□□ -0.32
HNRNPU-222ENST00000639880 TRIM26Q12899 539 aaPredicted RBP12.99□□□□□ -0.33
HNRNPU-222ENST00000639880 APLP2Q06481 763 aa12.98□□□□□ -0.33
HNRNPU-222ENST00000639880 ZEB1P37275 1124 aaPredicted RBP12.97□□□□□ -0.33
HNRNPU-222ENST00000639880 CCER1Q8TC90 406 aaPredicted RBP12.97□□□□□ -0.33
HNRNPU-222ENST00000639880 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
HNRNPU-222ENST00000639880 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
HNRNPU-222ENST00000639880 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
HNRNPU-222ENST00000639880 CENPBP07199 599 aaPredicted RBP12.73□□□□□ -0.37
HNRNPU-222ENST00000639880 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
HNRNPU-222ENST00000639880 ABCC9O60706 1549 aa12.67□□□□□ -0.38
HNRNPU-222ENST00000639880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
HNRNPU-222ENST00000639880 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
HNRNPU-222ENST00000639880 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
HNRNPU-222ENST00000639880 MYO15BQ96JP2 1530 aa12.58□□□□□ -0.39
HNRNPU-222ENST00000639880 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
HNRNPU-222ENST00000639880 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
HNRNPU-222ENST00000639880 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
HNRNPU-222ENST00000639880 ITGAEP38570 1179 aa12.48□□□□□ -0.41
HNRNPU-222ENST00000639880 SCRIBQ14160 1630 aa12.46□□□□□ -0.42
HNRNPU-222ENST00000639880 DIEXFQ68CQ4 756 aaKnown RBP12.45□□□□□ -0.42
HNRNPU-222ENST00000639880 DCAF1Q9Y4B6 1507 aa12.42□□□□□ -0.42
HNRNPU-222ENST00000639880 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
HNRNPU-222ENST00000639880 RSF1Q96T23 1441 aaPredicted RBP12.29□□□□□ -0.44
HNRNPU-222ENST00000639880 GTF3C3Q9Y5Q9 886 aa12.26□□□□□ -0.45
HNRNPU-222ENST00000639880 NEFLP07196 543 aa12.22□□□□□ -0.45
HNRNPU-222ENST00000639880 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
HNRNPU-222ENST00000639880 ACIN1Q9UKV3 1341 aaKnown RBP12.17□□□□□ -0.46
HNRNPU-222ENST00000639880 FAM50AQ14320 339 aaKnown RBP12.16□□□□□ -0.46
HNRNPU-222ENST00000639880 NEUROD1Q13562 356 aa12.12□□□□□ -0.47
HNRNPU-222ENST00000639880 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
HNRNPU-222ENST00000639880 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
HNRNPU-222ENST00000639880 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.48
HNRNPU-222ENST00000639880 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
HNRNPU-222ENST00000639880 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
HNRNPU-222ENST00000639880 POLR3GLQ9BT43 218 aa12.06□□□□□ -0.48
HNRNPU-222ENST00000639880 MYT1Q01538 1121 aa12.01□□□□□ -0.49
HNRNPU-222ENST00000639880 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
HNRNPU-222ENST00000639880 BCANQ96GW7 911 aa12□□□□□ -0.49
HNRNPU-222ENST00000639880 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
HNRNPU-222ENST00000639880 NACADO15069 1562 aa11.96□□□□□ -0.5
HNRNPU-222ENST00000639880 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
HNRNPU-222ENST00000639880 MIER1Q8N108 512 aa11.94□□□□□ -0.5
HNRNPU-222ENST00000639880 CLIP1P30622 1438 aa11.94□□□□□ -0.5
HNRNPU-222ENST00000639880 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
HNRNPU-222ENST00000639880 ARID3CA6NKF2 412 aa11.9□□□□□ -0.51
HNRNPU-222ENST00000639880 SOGA1O94964 1423 aa11.89□□□□□ -0.51
HNRNPU-222ENST00000639880 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
HNRNPU-222ENST00000639880 ANP32CO43423 234 aa11.88□□□□□ -0.51
HNRNPU-222ENST00000639880 TNIKQ9UKE5 1360 aa11.88□□□□□ -0.51
HNRNPU-222ENST00000639880 GOLGA3Q08378 1498 aa11.87□□□□□ -0.51
HNRNPU-222ENST00000639880 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
HNRNPU-222ENST00000639880 EEA1Q15075 1411 aa11.86□□□□□ -0.51
HNRNPU-222ENST00000639880 DDX10Q13206 875 aaKnown RBP11.84□□□□□ -0.51
HNRNPU-222ENST00000639880 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
HNRNPU-222ENST00000639880 ZNF326Q5BKZ1 582 aaKnown RBP11.82□□□□□ -0.52
HNRNPU-222ENST00000639880 CCDC88BA6NC98 1476 aa11.82□□□□□ -0.52
HNRNPU-222ENST00000639880 HIRIP3Q9BW71 556 aaPredicted RBP11.8□□□□□ -0.52
HNRNPU-222ENST00000639880 WIZO95785 1651 aa11.79□□□□□ -0.52
HNRNPU-222ENST00000639880 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
HNRNPU-222ENST00000639880 CEP164Q9UPV0 1460 aa11.76□□□□□ -0.53
HNRNPU-222ENST00000639880 FBLN2P98095 1184 aa11.76□□□□□ -0.53
HNRNPU-222ENST00000639880 BAZ1BQ9UIG0 1483 aaKnown RBP11.75□□□□□ -0.53
HNRNPU-222ENST00000639880 FKBP8Q14318 412 aa11.75□□□□□ -0.53
HNRNPU-222ENST00000639880 TONSLQ96HA7 1378 aa11.73□□□□□ -0.53
HNRNPU-222ENST00000639880 CHIC2Q9UKJ5 165 aa11.72□□□□□ -0.53
HNRNPU-222ENST00000639880 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
HNRNPU-222ENST00000639880 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
HNRNPU-222ENST00000639880 CDK11AQ9UQ88 783 aaPredicted RBP11.66□□□□□ -0.54
HNRNPU-222ENST00000639880 KIF27Q86VH2 1401 aa11.65□□□□□ -0.54
HNRNPU-222ENST00000639880 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
HNRNPU-222ENST00000639880 KANK4Q5T7N3 995 aaPredicted RBP11.65□□□□□ -0.55
HNRNPU-222ENST00000639880 MTUS2Q5JR59 1369 aa11.64□□□□□ -0.55
HNRNPU-222ENST00000639880 SIN3AQ96ST3 1273 aa11.64□□□□□ -0.55
HNRNPU-222ENST00000639880 CLSPNQ9HAW4 1339 aa11.63□□□□□ -0.55
HNRNPU-222ENST00000639880 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
HNRNPU-222ENST00000639880 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
HNRNPU-222ENST00000639880 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
HNRNPU-222ENST00000639880 RRP7BPQ9NSQ0 103 aa11.61□□□□□ -0.55
HNRNPU-222ENST00000639880 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
HNRNPU-222ENST00000639880 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
HNRNPU-222ENST00000639880 IRX6P78412 446 aaPredicted RBP11.58□□□□□ -0.56
HNRNPU-222ENST00000639880 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
HNRNPU-222ENST00000639880 RAPGEF2Q9Y4G8 1499 aa11.54□□□□□ -0.56
HNRNPU-222ENST00000639880 RTL5Q5HYW3 569 aaPredicted RBP11.53□□□□□ -0.56
HNRNPU-222ENST00000639880 CUX2O14529 1486 aa11.52□□□□□ -0.57
HNRNPU-222ENST00000639880 SMARCA4P51532 1647 aa11.52□□□□□ -0.57
HNRNPU-222ENST00000639880 MRS2Q9HD23 443 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms