RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
HNRNPU-224ENST00000640056 CCDC180Q9P1Z9 1646 aa19.55■□□□□ 0.72
HNRNPU-224ENST00000640056 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
HNRNPU-224ENST00000640056 ABCC9O60706 1549 aa19.3■□□□□ 0.68
HNRNPU-224ENST00000640056 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
HNRNPU-224ENST00000640056 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
HNRNPU-224ENST00000640056 NACADO15069 1562 aa18.48■□□□□ 0.55
HNRNPU-224ENST00000640056 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
HNRNPU-224ENST00000640056 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
HNRNPU-224ENST00000640056 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
HNRNPU-224ENST00000640056 DCAF1Q9Y4B6 1507 aa18.16■□□□□ 0.5
HNRNPU-224ENST00000640056 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
HNRNPU-224ENST00000640056 UNC13AQ9UPW8 1703 aa17.93■□□□□ 0.46
HNRNPU-224ENST00000640056 BICRAQ9NZM4 1560 aa17.92■□□□□ 0.46
HNRNPU-224ENST00000640056 SHROOM4Q9ULL8 1493 aa17.9■□□□□ 0.46
HNRNPU-224ENST00000640056 SCRIBQ14160 1630 aa17.73■□□□□ 0.43
HNRNPU-224ENST00000640056 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
HNRNPU-224ENST00000640056 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
HNRNPU-224ENST00000640056 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
HNRNPU-224ENST00000640056 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
HNRNPU-224ENST00000640056 CUX2O14529 1486 aa17.38■□□□□ 0.37
HNRNPU-224ENST00000640056 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
HNRNPU-224ENST00000640056 NCAPD3P42695 1498 aa17.08■□□□□ 0.32
HNRNPU-224ENST00000640056 ATAD2BQ9ULI0 1458 aa17■□□□□ 0.31
HNRNPU-224ENST00000640056 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
HNRNPU-224ENST00000640056 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
HNRNPU-224ENST00000640056 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
HNRNPU-224ENST00000640056 HMGXB3Q12766 1538 aa16.95■□□□□ 0.3
HNRNPU-224ENST00000640056 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
HNRNPU-224ENST00000640056 SUPT5HO00267 1087 aaKnown RBP16.87■□□□□ 0.29
HNRNPU-224ENST00000640056 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
HNRNPU-224ENST00000640056 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
HNRNPU-224ENST00000640056 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
HNRNPU-224ENST00000640056 ILDR1Q86SU0 546 aaPredicted RBP16.71■□□□□ 0.27
HNRNPU-224ENST00000640056 HRCP23327 699 aa16.64■□□□□ 0.25
HNRNPU-224ENST00000640056 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
HNRNPU-224ENST00000640056 NESP48681 1621 aa16.61■□□□□ 0.25
HNRNPU-224ENST00000640056 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
HNRNPU-224ENST00000640056 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
HNRNPU-224ENST00000640056 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
HNRNPU-224ENST00000640056 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
HNRNPU-224ENST00000640056 WIZO95785 1651 aa16.55■□□□□ 0.24
HNRNPU-224ENST00000640056 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
HNRNPU-224ENST00000640056 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
HNRNPU-224ENST00000640056 CFTRP13569 1480 aa16.39■□□□□ 0.21
HNRNPU-224ENST00000640056 PCGF6Q9BYE7 350 aa16.39■□□□□ 0.21
HNRNPU-224ENST00000640056 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
HNRNPU-224ENST00000640056 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
HNRNPU-224ENST00000640056 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
HNRNPU-224ENST00000640056 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
HNRNPU-224ENST00000640056 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
HNRNPU-224ENST00000640056 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
HNRNPU-224ENST00000640056 WDR62O43379 1518 aa16.32■□□□□ 0.2
HNRNPU-224ENST00000640056 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
HNRNPU-224ENST00000640056 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
HNRNPU-224ENST00000640056 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.17
HNRNPU-224ENST00000640056 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
HNRNPU-224ENST00000640056 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
HNRNPU-224ENST00000640056 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
HNRNPU-224ENST00000640056 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
HNRNPU-224ENST00000640056 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
HNRNPU-224ENST00000640056 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
HNRNPU-224ENST00000640056 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
HNRNPU-224ENST00000640056 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
HNRNPU-224ENST00000640056 TOPBP1Q92547 1522 aa16.02■□□□□ 0.15
HNRNPU-224ENST00000640056 CYB5RLQ6IPT4 315 aa15.99■□□□□ 0.15
HNRNPU-224ENST00000640056 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
HNRNPU-224ENST00000640056 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
HNRNPU-224ENST00000640056 ZNF608Q9ULD9 1512 aaPredicted RBP15.89■□□□□ 0.13
HNRNPU-224ENST00000640056 ZEB1P37275 1124 aaPredicted RBP15.87■□□□□ 0.13
HNRNPU-224ENST00000640056 POLA1P09884 1462 aaPredicted RBP15.87■□□□□ 0.13
HNRNPU-224ENST00000640056 TARBP1Q13395 1621 aaKnown RBP15.84■□□□□ 0.13
HNRNPU-224ENST00000640056 EIF4G3O43432 1585 aaKnown RBP15.82■□□□□ 0.12
HNRNPU-224ENST00000640056 SOGA1O94964 1423 aa15.82■□□□□ 0.12
HNRNPU-224ENST00000640056 WDR97A6NE52 1622 aa15.81■□□□□ 0.12
HNRNPU-224ENST00000640056 SOCS7O14512 581 aa15.78■□□□□ 0.12
HNRNPU-224ENST00000640056 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.121e-7■■■■□ 22.9
HNRNPU-224ENST00000640056 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
HNRNPU-224ENST00000640056 CUX1P39880 1505 aa15.78■□□□□ 0.12
HNRNPU-224ENST00000640056 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
HNRNPU-224ENST00000640056 LMTK3Q96Q04 1460 aa15.74■□□□□ 0.11
HNRNPU-224ENST00000640056 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
HNRNPU-224ENST00000640056 FBXO41Q8TF61 875 aa15.72■□□□□ 0.11
HNRNPU-224ENST00000640056 ARAP1Q96P48 1450 aa15.7■□□□□ 0.1
HNRNPU-224ENST00000640056 GRIN2BQ13224 1484 aa15.69■□□□□ 0.1
HNRNPU-224ENST00000640056 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
HNRNPU-224ENST00000640056 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
HNRNPU-224ENST00000640056 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
HNRNPU-224ENST00000640056 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
HNRNPU-224ENST00000640056 WRNQ14191 1432 aaPredicted RBP eCLIP15.64■□□□□ 0.09
HNRNPU-224ENST00000640056 FBLN2P98095 1184 aa15.64■□□□□ 0.09
HNRNPU-224ENST00000640056 GAPVD1Q14C86 1478 aa15.63■□□□□ 0.09
HNRNPU-224ENST00000640056 CHMP7Q8WUX9 453 aaPredicted RBP15.61■□□□□ 0.09
HNRNPU-224ENST00000640056 SYNJ2O15056 1496 aa15.61■□□□□ 0.09
HNRNPU-224ENST00000640056 TOP2BQ02880 1626 aa15.6■□□□□ 0.09
HNRNPU-224ENST00000640056 CHD1O14646 1710 aa15.6■□□□□ 0.09
HNRNPU-224ENST00000640056 BIVM-ERCC5R4GMW8 1640 aa15.58■□□□□ 0.08
HNRNPU-224ENST00000640056 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
HNRNPU-224ENST00000640056 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
HNRNPU-224ENST00000640056 FAM9AQ8IZU1 332 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms