RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
HNRNPU-209ENST00000476241 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
HNRNPU-209ENST00000476241 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
HNRNPU-209ENST00000476241 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
HNRNPU-209ENST00000476241 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
HNRNPU-209ENST00000476241 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
HNRNPU-209ENST00000476241 PELP1Q8IZL8 1130 aaKnown RBP25.1■■□□□ 1.61
HNRNPU-209ENST00000476241 FAM9AQ8IZU1 332 aaPredicted RBP25.04■■□□□ 1.6
HNRNPU-209ENST00000476241 ZEB1P37275 1124 aaPredicted RBP25■■□□□ 1.59
HNRNPU-209ENST00000476241 APLP2Q06481 763 aa24.98■■□□□ 1.59
HNRNPU-209ENST00000476241 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
HNRNPU-209ENST00000476241 CENPBP07199 599 aaPredicted RBP24.69■■□□□ 1.54
HNRNPU-209ENST00000476241 ABCC9O60706 1549 aa24.69■■□□□ 1.54
HNRNPU-209ENST00000476241 CCER1Q8TC90 406 aaPredicted RBP24.6■■□□□ 1.53
HNRNPU-209ENST00000476241 TTBK1Q5TCY1 1321 aaPredicted RBP24.6■■□□□ 1.53
HNRNPU-209ENST00000476241 HRCP23327 699 aa24.53■■□□□ 1.52
HNRNPU-209ENST00000476241 TRIM26Q12899 539 aaPredicted RBP24.44■■□□□ 1.5
HNRNPU-209ENST00000476241 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
HNRNPU-209ENST00000476241 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
HNRNPU-209ENST00000476241 RANGAP1P46060 587 aaPredicted RBP24.36■■□□□ 1.49
HNRNPU-209ENST00000476241 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
HNRNPU-209ENST00000476241 ATP1B4Q9UN42 357 aaPredicted RBP24.24■■□□□ 1.47
HNRNPU-209ENST00000476241 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
HNRNPU-209ENST00000476241 MYT1Q01538 1121 aa24.08■■□□□ 1.45
HNRNPU-209ENST00000476241 PPARGC1BQ86YN6 1023 aaKnown RBP24.04■■□□□ 1.44
HNRNPU-209ENST00000476241 YTHDC1Q96MU7 727 aaKnown RBP23.95■■□□□ 1.42
HNRNPU-209ENST00000476241 ERICH6Q7L0X2 663 aa23.89■■□□□ 1.42
HNRNPU-209ENST00000476241 NEFLP07196 543 aa23.84■■□□□ 1.41
HNRNPU-209ENST00000476241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.73■■□□□ 1.39
HNRNPU-209ENST00000476241 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
HNRNPU-209ENST00000476241 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
HNRNPU-209ENST00000476241 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
HNRNPU-209ENST00000476241 FBLN2P98095 1184 aa23.45■■□□□ 1.34
HNRNPU-209ENST00000476241 ITGAEP38570 1179 aa23.39■■□□□ 1.34
HNRNPU-209ENST00000476241 GTF3C3Q9Y5Q9 886 aa23.11■■□□□ 1.29
HNRNPU-209ENST00000476241 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
HNRNPU-209ENST00000476241 DCAF1Q9Y4B6 1507 aa23.04■■□□□ 1.28
HNRNPU-209ENST00000476241 ZNF316A6NFI3 1004 aaPredicted RBP23.02■■□□□ 1.28
HNRNPU-209ENST00000476241 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
HNRNPU-209ENST00000476241 ACIN1Q9UKV3 1341 aaKnown RBP22.97■■□□□ 1.27
HNRNPU-209ENST00000476241 POLR3GLQ9BT43 218 aa22.94■■□□□ 1.26
HNRNPU-209ENST00000476241 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
HNRNPU-209ENST00000476241 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
HNRNPU-209ENST00000476241 DAXXQ9UER7 740 aaPredicted RBP22.87■■□□□ 1.25
HNRNPU-209ENST00000476241 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
HNRNPU-209ENST00000476241 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
HNRNPU-209ENST00000476241 NEUROD1Q13562 356 aa22.76■■□□□ 1.23
HNRNPU-209ENST00000476241 NPM1P06748 294 aaKnown RBP eCLIP22.75■■□□□ 1.23
HNRNPU-209ENST00000476241 CNGB1Q14028 1251 aaPredicted RBP22.73■■□□□ 1.23
HNRNPU-209ENST00000476241 ANP32CO43423 234 aa22.72■■□□□ 1.23
HNRNPU-209ENST00000476241 ARID3CA6NKF2 412 aa22.64■■□□□ 1.22
HNRNPU-209ENST00000476241 TRIM52Q96A61 297 aa22.64■■□□□ 1.22
HNRNPU-209ENST00000476241 BCANQ96GW7 911 aa22.64■■□□□ 1.21
HNRNPU-209ENST00000476241 RTL5Q5HYW3 569 aaPredicted RBP22.62■■□□□ 1.21
HNRNPU-209ENST00000476241 P3H3Q8IVL6 736 aa22.61■■□□□ 1.21
HNRNPU-209ENST00000476241 CLSPNQ9HAW4 1339 aa22.58■■□□□ 1.2
HNRNPU-209ENST00000476241 CDK11AQ9UQ88 783 aaPredicted RBP22.54■■□□□ 1.2
HNRNPU-209ENST00000476241 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
HNRNPU-209ENST00000476241 MYO15BQ96JP2 1530 aa22.52■■□□□ 1.2
HNRNPU-209ENST00000476241 NACADO15069 1562 aa22.52■■□□□ 1.2
HNRNPU-209ENST00000476241 ESF1Q9H501 851 aaKnown RBP22.47■■□□□ 1.19
HNRNPU-209ENST00000476241 SLC4A1APQ9BWU0 796 aaKnown RBP22.42■■□□□ 1.18
HNRNPU-209ENST00000476241 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
HNRNPU-209ENST00000476241 ZNF777Q9ULD5 760 aaPredicted RBP22.37■■□□□ 1.17
HNRNPU-209ENST00000476241 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
HNRNPU-209ENST00000476241 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.16
HNRNPU-209ENST00000476241 ZNF326Q5BKZ1 582 aaKnown RBP22.3■■□□□ 1.16
HNRNPU-209ENST00000476241 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
HNRNPU-209ENST00000476241 FKBP8Q14318 412 aa22.23■■□□□ 1.15
HNRNPU-209ENST00000476241 TONSLQ96HA7 1378 aa22.2■■□□□ 1.15
HNRNPU-209ENST00000476241 MIER1Q8N108 512 aa22.19■■□□□ 1.14
HNRNPU-209ENST00000476241 DDX10Q13206 875 aaKnown RBP22.19■■□□□ 1.14
HNRNPU-209ENST00000476241 BAZ1BQ9UIG0 1483 aaKnown RBP22.19■■□□□ 1.14
HNRNPU-209ENST00000476241 EEA1Q15075 1411 aa22.16■■□□□ 1.14
HNRNPU-209ENST00000476241 CLIP1P30622 1438 aa22.13■■□□□ 1.13
HNRNPU-209ENST00000476241 ANP32AP39687 249 aaKnown RBP22.11■■□□□ 1.13
HNRNPU-209ENST00000476241 HNRNPUQ00839 825 aaKnown RBP eCLIP22.09■■□□□ 1.13
HNRNPU-209ENST00000476241 STAG3Q9UJ98 1225 aa22.09■■□□□ 1.13
HNRNPU-209ENST00000476241 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
HNRNPU-209ENST00000476241 TRHP20396 242 aaPredicted RBP22.05■■□□□ 1.12
HNRNPU-209ENST00000476241 GOLGA3Q08378 1498 aa22.02■■□□□ 1.11
HNRNPU-209ENST00000476241 KCNH8Q96L42 1107 aa22.01■■□□□ 1.11
HNRNPU-209ENST00000476241 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
HNRNPU-209ENST00000476241 CHGAP10645 457 aaKnown RBP21.97■■□□□ 1.11
HNRNPU-209ENST00000476241 FAM9BQ8IZU0 186 aa21.92■■□□□ 1.1
HNRNPU-209ENST00000476241 CANXP27824 592 aaKnown RBP21.9■■□□□ 1.1
HNRNPU-209ENST00000476241 TSPY4P0CV99 314 aa21.88■■□□□ 1.09
HNRNPU-209ENST00000476241 TSPY10P0CW01 314 aa21.88■■□□□ 1.09
HNRNPU-209ENST00000476241 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
HNRNPU-209ENST00000476241 WRNQ14191 1432 aaPredicted RBP eCLIP21.86■■□□□ 1.09
HNRNPU-209ENST00000476241 NPM2Q86SE8 214 aaKnown RBP21.84■■□□□ 1.09
HNRNPU-209ENST00000476241 ARID4BQ4LE39 1312 aaPredicted RBP21.83■■□□□ 1.09
HNRNPU-209ENST00000476241 MTUS2Q5JR59 1369 aa21.82■■□□□ 1.08
HNRNPU-209ENST00000476241 ZBTB47Q9UFB7 747 aaPredicted RBP21.82■■□□□ 1.08
HNRNPU-209ENST00000476241 MRS2Q9HD23 443 aa21.81■■□□□ 1.08
HNRNPU-209ENST00000476241 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
HNRNPU-209ENST00000476241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.087e-11■■□□□ 14
HNRNPU-209ENST00000476241 CHIC2Q9UKJ5 165 aa21.8■■□□□ 1.08
HNRNPU-209ENST00000476241 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
HNRNPU-209ENST00000476241 CCDC136Q96JN2 1154 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms