Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.08■□□□□ 0.481e-323■■■■□ 24.4
U2AF2P26368 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.82■□□□□ 0.281e-323■□□□□ 11
U2AF2P26368 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.74■□□□□ 0.111e-323■□□□□ 10.2
U2AF2P26368 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC15.38■□□□□ 0.051e-323■□□□□ 11
U2AF2P26368 NEAT1_1.1-201ENST00000620348 120 ntBASIC12.89□□□□□ -0.351e-323■□□□□ 10.2
U2AF2P26368 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC10.61□□□□□ -0.711e-323■□□□□ 8.2
U2AF2P26368 MALAT1-202ENST00000534336 8708 ntBASIC10.06□□□□□ -0.81e-323■■■■□ 24.2
U2AF2P26368 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.48□□□□□ -0.891e-323■■■■■ 33.2
U2AF2P26368 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC9.11□□□□□ -0.951e-323■□□□□ 9.1
U2AF2P26368 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC8.8□□□□□ -11e-323■□□□□ 9.6
U2AF2P26368 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.85□□□□□ -1.311e-323■□□□□ 9
U2AF2P26368 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.42□□□□□ -1.71e-323■■■■■ 27.7
U2AF2P26368 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.941e-323■■■■■ 54.5
U2AF2P26368 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.84□□□□□ -1.951e-323■□□□□ 9.6
U2AF2P26368 MALAT1-216ENST00000620465 333 ntTSL 22.39□□□□□ -2.031e-323■□□□□ 9.9
U2AF2P26368 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.8□□□□□ -2.121e-323■■■■■ 34.3
U2AF2P26368 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.77□□□□□ -2.131e-323■■□□□ 12
U2AF2P26368 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.03□□□□□ -2.41e-323■■□□□ 12
U2AF2P26368 ATXN2L-214ENST00000564284 603 ntTSL 217.42■□□□□ 0.389e-87■■■■■ 54.8
U2AF2P26368 MIR3064-201ENST00000581130 66 ntBASIC-1.21□□□□□ -2.69e-85■■■■□ 23.6
U2AF2P26368 SLC38A2-204ENST00000548111 583 ntTSL 43.56□□□□□ -1.843e-84■■■■□ 20.2
U2AF2P26368 SRP54-212ENST00000556992 529 ntTSL 25.1□□□□□ -1.593e-75■■■■■ 160.4
U2AF2P26368 HSPA8-209ENST00000526862 504 ntTSL 35□□□□□ -1.615e-72■■■■■ 40.6
U2AF2P26368 AUP1-207ENST00000472800 663 ntTSL 422.39■■□□□ 1.172e-71■■□□□ 12
U2AF2P26368 SRRM2-225ENST00000576076 914 nt19.31■□□□□ 0.687e-71■■□□□ 11.5
U2AF2P26368 SRRM2-212ENST00000572952 1118 ntTSL 214.33□□□□□ -0.127e-71■■□□□ 11.5
U2AF2P26368 PTP4A1-207ENST00000639568 532 ntTSL 512.07□□□□□ -0.482e-69■□□□□ 9.9
U2AF2P26368 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.3■□□□□ 0.522e-64■■■□□ 14.9
U2AF2P26368 RBM39-215ENST00000442447 644 ntTSL 218.09■□□□□ 0.492e-64■■■□□ 14.9
U2AF2P26368 RBM39-219ENST00000453310 1068 ntTSL 217.82■□□□□ 0.442e-64■■■□□ 14.9
U2AF2P26368 RBM39-213ENST00000433027 611 ntTSL 517.73■□□□□ 0.432e-64■■■□□ 14.9
U2AF2P26368 RBM39-224ENST00000463098 869 ntTSL 217.04■□□□□ 0.322e-64■■■□□ 15.1
U2AF2P26368 RBM39-222ENST00000461849 861 ntTSL 215.56■□□□□ 0.083e-64■■□□□ 14
U2AF2P26368 HNRNPH1-228ENST00000515714 690 ntTSL 420.87■□□□□ 0.933e-62■□□□□ 10.4
U2AF2P26368 HNRNPH1-208ENST00000503664 569 ntTSL 418.63■□□□□ 0.573e-62■□□□□ 10.4
U2AF2P26368 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.63■□□□□ 0.573e-62■□□□□ 10.4
U2AF2P26368 HNRNPH1-219ENST00000512273 501 ntTSL 49.39□□□□□ -0.913e-62■□□□□ 10.4
U2AF2P26368 CFB-274ENST00000461483 1277 ntTSL 512.37□□□□□ -0.433e-62■■■■□ 22
U2AF2P26368 CFB-283ENST00000497841 736 ntTSL 38.95□□□□□ -0.983e-62■■■■□ 22
U2AF2P26368 CFB-275ENST00000465750 568 ntTSL 27.81□□□□□ -1.163e-62■■■■□ 22
U2AF2P26368 MTG1-204ENST00000473735 2212 ntTSL 525.56■■□□□ 1.685e-61■■■□□ 16
U2AF2P26368 MTG1-207ENST00000495014 871 ntTSL 321.18■□□□□ 0.985e-61■■■□□ 16
U2AF2P26368 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.945e-61■■■□□ 16
U2AF2P26368 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.1■□□□□ 0.815e-61■■■□□ 16
U2AF2P26368 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.85e-61■■■□□ 16
U2AF2P26368 MTG1-202ENST00000432508 953 ntTSL 219.2■□□□□ 0.665e-61■■■□□ 16
U2AF2P26368 MTG1-203ENST00000460848 2730 ntTSL 216.56■□□□□ 0.245e-61■■■□□ 16
U2AF2P26368 MTG1-206ENST00000492266 413 ntTSL 211.95□□□□□ -0.55e-61■■■□□ 16
U2AF2P26368 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.975e-61■■□□□ 13
U2AF2P26368 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.195e-61■■□□□ 13
U2AF2P26368 AJUBA-206ENST00000553911 567 ntTSL 510.77□□□□□ -0.695e-61■■□□□ 13
U2AF2P26368 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC10.74□□□□□ -0.695e-61■■□□□ 13
U2AF2P26368 AJUBA-204ENST00000553592 418 ntTSL 58.04□□□□□ -1.125e-61■■□□□ 13
U2AF2P26368 AJUBA-208ENST00000556731 651 ntTSL 48.04□□□□□ -1.125e-61■■□□□ 13
U2AF2P26368 HNRNPH1-238ENST00000521116 806 ntTSL 424.27■■□□□ 1.489e-60■□□□□ 9.7
U2AF2P26368 HNRNPH1-212ENST00000505087 592 ntTSL 319.37■□□□□ 0.699e-60■□□□□ 9.7
U2AF2P26368 HNRNPH1-225ENST00000515158 850 ntTSL 416.91■□□□□ 0.39e-60■□□□□ 9.7
U2AF2P26368 HNRNPH1-234ENST00000519707 582 ntTSL 215.11■□□□□ 0.019e-60■□□□□ 9.7
U2AF2P26368 HNRNPH1-233ENST00000519455 451 ntTSL 414.9□□□□□ -0.029e-60■□□□□ 9.7
U2AF2P26368 BCL2L2-204ENST00000556599 548 ntTSL 320.93■□□□□ 0.943e-59■■□□□ 14.5
U2AF2P26368 HNRNPH1-237ENST00000520415 620 ntTSL 314.06□□□□□ -0.163e-58■■■□□ 18.4
U2AF2P26368 ATP5B-205ENST00000548647 682 ntTSL 517.82■□□□□ 0.446e-57■□□□□ 10.2
U2AF2P26368 CPNE1-228ENST00000498814 550 ntTSL 317.66■□□□□ 0.428e-57■■■■□ 22.3
U2AF2P26368 CPNE1-209ENST00000415920 731 ntTSL 515.46■□□□□ 0.078e-57■■■■□ 22.3
U2AF2P26368 CPNE1-225ENST00000483495 1853 ntTSL 515.38■□□□□ 0.058e-57■■■■□ 22.3
U2AF2P26368 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.038e-57■■■■□ 22.3
U2AF2P26368 CPNE1-221ENST00000462352 625 ntTSL 213.42□□□□□ -0.268e-57■■■■□ 22.3
U2AF2P26368 CPNE1-222ENST00000473373 821 ntTSL 212.81□□□□□ -0.368e-57■■■■□ 22.3
U2AF2P26368 BRD2-206ENST00000456339 887 ntTSL 416.47■□□□□ 0.232e-54■■■□□ 19
U2AF2P26368 HECTD1-206ENST00000554471 819 ntTSL 27.01□□□□□ -1.291e-53■■■□□ 14.7
U2AF2P26368 MIR21-201ENST00000362134 72 ntBASIC2.79□□□□□ -1.963e-52■■■■■ 35.9
U2AF2P26368 IDH1-202ENST00000415282 942 ntTSL 219.16■□□□□ 0.662e-51■■□□□ 13.3
U2AF2P26368 RRBP1-207ENST00000468428 2200 ntTSL 219.24■□□□□ 0.672e-50■■■■□ 24.2
U2AF2P26368 AGFG2-205ENST00000477022 1327 ntTSL 1 (best)23.05■■□□□ 1.284e-50■■□□□ 14
U2AF2P26368 PGK1-203ENST00000476531 960 ntTSL 211.88□□□□□ -0.515e-50■■■■■ 94.5
U2AF2P26368 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.555e-50■■■■■ 94.5
U2AF2P26368 RNU6-9-201ENST00000384776 107 ntBASIC1.44□□□□□ -2.189e-50■□□□□ 9.3
U2AF2P26368 SRSF2-211ENST00000592676 559 ntTSL 36.12□□□□□ -1.431e-49■■■■□ 20.9
U2AF2P26368 ANKRD10-203ENST00000460846 535 ntTSL 314.25□□□□□ -0.132e-49■■■□□ 17.7
U2AF2P26368 ANKRD10-204ENST00000463156 395 ntTSL 38.99□□□□□ -0.972e-49■■■□□ 17.7
U2AF2P26368 MVD-212ENST00000565842 285 ntTSL 326.74■■□□□ 1.873e-49■■■■■ 52.7
U2AF2P26368 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.733e-49■■■■■ 52.7
U2AF2P26368 MVD-204ENST00000562741 217 ntTSL 223.27■■□□□ 1.323e-49■■■■■ 52.7
U2AF2P26368 MVD-210ENST00000565610 507 ntTSL 322.08■■□□□ 1.133e-49■■■■■ 52.7
U2AF2P26368 MVD-208ENST00000563785 888 ntTSL 221.86■■□□□ 1.093e-49■■■■■ 52.7
U2AF2P26368 MVD-214ENST00000567064 758 ntTSL 321.13■□□□□ 0.973e-49■■■■■ 52.7
U2AF2P26368 MVD-216ENST00000568709 809 ntTSL 520.94■□□□□ 0.943e-49■■■■■ 52.7
U2AF2P26368 MVD-217ENST00000569177 870 ntTSL 519.28■□□□□ 0.683e-49■■■■■ 52.7
U2AF2P26368 MVD-206ENST00000563170 904 ntTSL 318.52■□□□□ 0.563e-49■■■■■ 52.7
U2AF2P26368 MVD-215ENST00000568133 853 ntTSL 318.51■□□□□ 0.553e-49■■■■■ 52.7
U2AF2P26368 MVD-207ENST00000563463 543 ntTSL 317.07■□□□□ 0.323e-49■■■■■ 52.7
U2AF2P26368 PPP1R15A-202ENST00000600406 1725 nt18.38■□□□□ 0.538e-49■■■■■ 35.7
U2AF2P26368 FDFT1-203ENST00000446331 1558 ntTSL 227.39■■□□□ 1.981e-48■□□□□ 9.9
U2AF2P26368 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.61e-48■□□□□ 9.9
U2AF2P26368 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.96■■□□□ 1.431e-48■□□□□ 9.9
U2AF2P26368 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.18■■□□□ 1.31e-48■□□□□ 9.9
U2AF2P26368 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.57■■□□□ 1.21e-48■□□□□ 9.9
U2AF2P26368 FDFT1-207ENST00000525607 1773 ntTSL 221.53■■□□□ 1.041e-48■□□□□ 9.9
U2AF2P26368 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.651e-48■□□□□ 9.9
U2AF2P26368 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.13■□□□□ 0.331e-48■□□□□ 9.9
Retrieved 100 of 36,523 protein–RNA pairs in 108.8 ms