Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.08■□□□□ 0.481e-323■■■■□ 24.4
U2AF2P26368 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.82■□□□□ 0.281e-323■□□□□ 11
U2AF2P26368 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.74■□□□□ 0.111e-323■□□□□ 10.2
U2AF2P26368 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC15.38■□□□□ 0.051e-323■□□□□ 11
U2AF2P26368 NEAT1_1.1-201ENST00000620348 120 ntBASIC12.89□□□□□ -0.351e-323■□□□□ 10.2
U2AF2P26368 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC10.61□□□□□ -0.711e-323■□□□□ 8.2
U2AF2P26368 MALAT1-202ENST00000534336 8708 ntBASIC10.06□□□□□ -0.81e-323■■■■□ 24.2
U2AF2P26368 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.48□□□□□ -0.891e-323■■■■■ 33.2
U2AF2P26368 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC9.11□□□□□ -0.951e-323■□□□□ 9.1
U2AF2P26368 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC8.8□□□□□ -11e-323■□□□□ 9.6
U2AF2P26368 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.85□□□□□ -1.311e-323■□□□□ 9
U2AF2P26368 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.42□□□□□ -1.71e-323■■■■■ 27.7
U2AF2P26368 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.941e-323■■■■■ 54.5
U2AF2P26368 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.84□□□□□ -1.951e-323■□□□□ 9.6
U2AF2P26368 MALAT1-216ENST00000620465 333 ntTSL 22.39□□□□□ -2.031e-323■□□□□ 9.9
U2AF2P26368 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.8□□□□□ -2.121e-323■■■■■ 34.3
U2AF2P26368 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.77□□□□□ -2.131e-323■■□□□ 12
U2AF2P26368 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.03□□□□□ -2.41e-323■■□□□ 12
U2AF2P26368 ATXN2L-214ENST00000564284 603 ntTSL 217.42■□□□□ 0.389e-87■■■■■ 54.8
U2AF2P26368 MIR3064-201ENST00000581130 66 ntBASIC-1.21□□□□□ -2.69e-85■■■■□ 23.6
U2AF2P26368 SLC38A2-204ENST00000548111 583 ntTSL 43.56□□□□□ -1.843e-84■■■■□ 20.2
U2AF2P26368 SRP54-212ENST00000556992 529 ntTSL 25.1□□□□□ -1.593e-75■■■■■ 160.4
U2AF2P26368 HSPA8-209ENST00000526862 504 ntTSL 35□□□□□ -1.615e-72■■■■■ 40.6
U2AF2P26368 AUP1-207ENST00000472800 663 ntTSL 422.39■■□□□ 1.172e-71■■□□□ 12
U2AF2P26368 SRRM2-225ENST00000576076 914 nt19.31■□□□□ 0.687e-71■■□□□ 11.5
U2AF2P26368 SRRM2-212ENST00000572952 1118 ntTSL 214.33□□□□□ -0.127e-71■■□□□ 11.5
U2AF2P26368 PTP4A1-207ENST00000639568 532 ntTSL 512.07□□□□□ -0.482e-69■□□□□ 9.9
U2AF2P26368 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.3■□□□□ 0.522e-64■■■□□ 14.9
U2AF2P26368 RBM39-215ENST00000442447 644 ntTSL 218.09■□□□□ 0.492e-64■■■□□ 14.9
U2AF2P26368 RBM39-219ENST00000453310 1068 ntTSL 217.82■□□□□ 0.442e-64■■■□□ 14.9
U2AF2P26368 RBM39-213ENST00000433027 611 ntTSL 517.73■□□□□ 0.432e-64■■■□□ 14.9
U2AF2P26368 RBM39-224ENST00000463098 869 ntTSL 217.04■□□□□ 0.322e-64■■■□□ 15.1
U2AF2P26368 RBM39-222ENST00000461849 861 ntTSL 215.56■□□□□ 0.083e-64■■□□□ 14
U2AF2P26368 HNRNPH1-228ENST00000515714 690 ntTSL 420.87■□□□□ 0.933e-62■□□□□ 10.4
U2AF2P26368 HNRNPH1-208ENST00000503664 569 ntTSL 418.63■□□□□ 0.573e-62■□□□□ 10.4
U2AF2P26368 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.63■□□□□ 0.573e-62■□□□□ 10.4
U2AF2P26368 HNRNPH1-219ENST00000512273 501 ntTSL 49.39□□□□□ -0.913e-62■□□□□ 10.4
U2AF2P26368 CFB-274ENST00000461483 1277 ntTSL 512.37□□□□□ -0.433e-62■■■■□ 22
U2AF2P26368 CFB-283ENST00000497841 736 ntTSL 38.95□□□□□ -0.983e-62■■■■□ 22
U2AF2P26368 CFB-275ENST00000465750 568 ntTSL 27.81□□□□□ -1.163e-62■■■■□ 22
U2AF2P26368 MTG1-204ENST00000473735 2212 ntTSL 525.56■■□□□ 1.685e-61■■■□□ 16
U2AF2P26368 MTG1-207ENST00000495014 871 ntTSL 321.18■□□□□ 0.985e-61■■■□□ 16
U2AF2P26368 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.945e-61■■■□□ 16
U2AF2P26368 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.1■□□□□ 0.815e-61■■■□□ 16
U2AF2P26368 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.85e-61■■■□□ 16
U2AF2P26368 MTG1-202ENST00000432508 953 ntTSL 219.2■□□□□ 0.665e-61■■■□□ 16
U2AF2P26368 MTG1-203ENST00000460848 2730 ntTSL 216.56■□□□□ 0.245e-61■■■□□ 16
U2AF2P26368 MTG1-206ENST00000492266 413 ntTSL 211.95□□□□□ -0.55e-61■■■□□ 16
U2AF2P26368 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.975e-61■■□□□ 13
U2AF2P26368 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.195e-61■■□□□ 13
U2AF2P26368 AJUBA-206ENST00000553911 567 ntTSL 510.77□□□□□ -0.695e-61■■□□□ 13
U2AF2P26368 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC10.74□□□□□ -0.695e-61■■□□□ 13
U2AF2P26368 AJUBA-204ENST00000553592 418 ntTSL 58.04□□□□□ -1.125e-61■■□□□ 13
U2AF2P26368 AJUBA-208ENST00000556731 651 ntTSL 48.04□□□□□ -1.125e-61■■□□□ 13
U2AF2P26368 HNRNPH1-238ENST00000521116 806 ntTSL 424.27■■□□□ 1.489e-60■□□□□ 9.7
U2AF2P26368 HNRNPH1-212ENST00000505087 592 ntTSL 319.37■□□□□ 0.699e-60■□□□□ 9.7
U2AF2P26368 HNRNPH1-225ENST00000515158 850 ntTSL 416.91■□□□□ 0.39e-60■□□□□ 9.7
U2AF2P26368 HNRNPH1-234ENST00000519707 582 ntTSL 215.11■□□□□ 0.019e-60■□□□□ 9.7
U2AF2P26368 HNRNPH1-233ENST00000519455 451 ntTSL 414.9□□□□□ -0.029e-60■□□□□ 9.7
U2AF2P26368 BCL2L2-204ENST00000556599 548 ntTSL 320.93■□□□□ 0.943e-59■■□□□ 14.5
U2AF2P26368 HNRNPH1-237ENST00000520415 620 ntTSL 314.06□□□□□ -0.163e-58■■■□□ 18.4
U2AF2P26368 ATP5B-205ENST00000548647 682 ntTSL 517.82■□□□□ 0.446e-57■□□□□ 10.2
U2AF2P26368 CPNE1-228ENST00000498814 550 ntTSL 317.66■□□□□ 0.428e-57■■■■□ 22.3
U2AF2P26368 CPNE1-209ENST00000415920 731 ntTSL 515.46■□□□□ 0.078e-57■■■■□ 22.3
U2AF2P26368 CPNE1-225ENST00000483495 1853 ntTSL 515.38■□□□□ 0.058e-57■■■■□ 22.3
U2AF2P26368 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.038e-57■■■■□ 22.3
U2AF2P26368 CPNE1-221ENST00000462352 625 ntTSL 213.42□□□□□ -0.268e-57■■■■□ 22.3
U2AF2P26368 CPNE1-222ENST00000473373 821 ntTSL 212.81□□□□□ -0.368e-57■■■■□ 22.3
U2AF2P26368 BRD2-206ENST00000456339 887 ntTSL 416.47■□□□□ 0.232e-54■■■□□ 19
U2AF2P26368 HECTD1-206ENST00000554471 819 ntTSL 27.01□□□□□ -1.291e-53■■■□□ 14.7
U2AF2P26368 MIR21-201ENST00000362134 72 ntBASIC2.79□□□□□ -1.963e-52■■■■■ 35.9
U2AF2P26368 IDH1-202ENST00000415282 942 ntTSL 219.16■□□□□ 0.662e-51■■□□□ 13.3
U2AF2P26368 RRBP1-207ENST00000468428 2200 ntTSL 219.24■□□□□ 0.672e-50■■■■□ 24.2
U2AF2P26368 AGFG2-205ENST00000477022 1327 ntTSL 1 (best)23.05■■□□□ 1.284e-50■■□□□ 14
U2AF2P26368 PGK1-203ENST00000476531 960 ntTSL 211.88□□□□□ -0.515e-50■■■■■ 94.5
U2AF2P26368 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.555e-50■■■■■ 94.5
U2AF2P26368 RNU6-9-201ENST00000384776 107 ntBASIC1.44□□□□□ -2.189e-50■□□□□ 9.3
U2AF2P26368 SRSF2-211ENST00000592676 559 ntTSL 36.12□□□□□ -1.431e-49■■■■□ 20.9
U2AF2P26368 ANKRD10-203ENST00000460846 535 ntTSL 314.25□□□□□ -0.132e-49■■■□□ 17.7
U2AF2P26368 ANKRD10-204ENST00000463156 395 ntTSL 38.99□□□□□ -0.972e-49■■■□□ 17.7
U2AF2P26368 MVD-212ENST00000565842 285 ntTSL 326.74■■□□□ 1.873e-49■■■■■ 52.7
U2AF2P26368 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.733e-49■■■■■ 52.7
U2AF2P26368 MVD-204ENST00000562741 217 ntTSL 223.27■■□□□ 1.323e-49■■■■■ 52.7
U2AF2P26368 MVD-210ENST00000565610 507 ntTSL 322.08■■□□□ 1.133e-49■■■■■ 52.7
U2AF2P26368 MVD-208ENST00000563785 888 ntTSL 221.86■■□□□ 1.093e-49■■■■■ 52.7
U2AF2P26368 MVD-214ENST00000567064 758 ntTSL 321.13■□□□□ 0.973e-49■■■■■ 52.7
U2AF2P26368 MVD-216ENST00000568709 809 ntTSL 520.94■□□□□ 0.943e-49■■■■■ 52.7
U2AF2P26368 MVD-217ENST00000569177 870 ntTSL 519.28■□□□□ 0.683e-49■■■■■ 52.7
U2AF2P26368 MVD-206ENST00000563170 904 ntTSL 318.52■□□□□ 0.563e-49■■■■■ 52.7
U2AF2P26368 MVD-215ENST00000568133 853 ntTSL 318.51■□□□□ 0.553e-49■■■■■ 52.7
U2AF2P26368 MVD-207ENST00000563463 543 ntTSL 317.07■□□□□ 0.323e-49■■■■■ 52.7
U2AF2P26368 PPP1R15A-202ENST00000600406 1725 nt18.38■□□□□ 0.538e-49■■■■■ 35.7
U2AF2P26368 FDFT1-203ENST00000446331 1558 ntTSL 227.39■■□□□ 1.981e-48■□□□□ 9.9
U2AF2P26368 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.61e-48■□□□□ 9.9
U2AF2P26368 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.96■■□□□ 1.431e-48■□□□□ 9.9
U2AF2P26368 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.18■■□□□ 1.31e-48■□□□□ 9.9
U2AF2P26368 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.57■■□□□ 1.21e-48■□□□□ 9.9
U2AF2P26368 FDFT1-207ENST00000525607 1773 ntTSL 221.53■■□□□ 1.041e-48■□□□□ 9.9
U2AF2P26368 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.651e-48■□□□□ 9.9
U2AF2P26368 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.13■□□□□ 0.331e-48■□□□□ 9.9
Retrieved 100 of 36,523 protein–RNA pairs in 69.2 ms