RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 DCAF8L2P0C7V8 631 aa29.25■■■□□ 2.27
HNRNPU-217ENST00000638952 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
HNRNPU-217ENST00000638952 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
HNRNPU-217ENST00000638952 PELP1Q8IZL8 1130 aaKnown RBP27.98■■■□□ 2.07
HNRNPU-217ENST00000638952 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
HNRNPU-217ENST00000638952 EHMT2Q96KQ7 1210 aa27.4■■□□□ 1.98
HNRNPU-217ENST00000638952 ERICH6Q7L0X2 663 aa26.98■■□□□ 1.91
HNRNPU-217ENST00000638952 MYT1Q01538 1121 aa26.84■■□□□ 1.89
HNRNPU-217ENST00000638952 PCGF6Q9BYE7 350 aa26.78■■□□□ 1.88
HNRNPU-217ENST00000638952 FAM9AQ8IZU1 332 aaPredicted RBP26.66■■□□□ 1.86
HNRNPU-217ENST00000638952 CCER1Q8TC90 406 aaPredicted RBP26.66■■□□□ 1.86
HNRNPU-217ENST00000638952 APLP2Q06481 763 aa26.61■■□□□ 1.85
HNRNPU-217ENST00000638952 CENPBP07199 599 aaPredicted RBP26.58■■□□□ 1.85
HNRNPU-217ENST00000638952 TTBK1Q5TCY1 1321 aaPredicted RBP26.54■■□□□ 1.84
HNRNPU-217ENST00000638952 ZEB1P37275 1124 aaPredicted RBP26.21■■□□□ 1.79
HNRNPU-217ENST00000638952 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
HNRNPU-217ENST00000638952 RANGAP1P46060 587 aaPredicted RBP26.04■■□□□ 1.76
HNRNPU-217ENST00000638952 NEFLP07196 543 aa25.96■■□□□ 1.75
HNRNPU-217ENST00000638952 YTHDC1Q96MU7 727 aaKnown RBP25.86■■□□□ 1.73
HNRNPU-217ENST00000638952 UBTFP17480 764 aaKnown RBP25.72■■□□□ 1.71
HNRNPU-217ENST00000638952 PPARGC1BQ86YN6 1023 aaKnown RBP25.66■■□□□ 1.7
HNRNPU-217ENST00000638952 ATP1B4Q9UN42 357 aaPredicted RBP25.66■■□□□ 1.7
HNRNPU-217ENST00000638952 TRIM26Q12899 539 aaPredicted RBP25.58■■□□□ 1.69
HNRNPU-217ENST00000638952 HRCP23327 699 aa25.57■■□□□ 1.68
HNRNPU-217ENST00000638952 DAXXQ9UER7 740 aaPredicted RBP25.46■■□□□ 1.67
HNRNPU-217ENST00000638952 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
HNRNPU-217ENST00000638952 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
HNRNPU-217ENST00000638952 RTL5Q5HYW3 569 aaPredicted RBP25.08■■□□□ 1.61
HNRNPU-217ENST00000638952 ITGAEP38570 1179 aa25.02■■□□□ 1.6
HNRNPU-217ENST00000638952 HNRNPUL2Q1KMD3 747 aaKnown RBP24.97■■□□□ 1.59
HNRNPU-217ENST00000638952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.86■■□□□ 1.57
HNRNPU-217ENST00000638952 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
HNRNPU-217ENST00000638952 POLR3GLQ9BT43 218 aa24.77■■□□□ 1.56
HNRNPU-217ENST00000638952 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
HNRNPU-217ENST00000638952 CNGB1Q14028 1251 aaPredicted RBP24.62■■□□□ 1.53
HNRNPU-217ENST00000638952 CLSPNQ9HAW4 1339 aa24.57■■□□□ 1.52
HNRNPU-217ENST00000638952 GTF3C3Q9Y5Q9 886 aa24.42■■□□□ 1.5
HNRNPU-217ENST00000638952 MYT1LQ9UL68 1186 aa24.41■■□□□ 1.5
HNRNPU-217ENST00000638952 BCANQ96GW7 911 aa24.35■■□□□ 1.49
HNRNPU-217ENST00000638952 FAM50AQ14320 339 aaKnown RBP24.35■■□□□ 1.49
HNRNPU-217ENST00000638952 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
HNRNPU-217ENST00000638952 EIF5BO60841 1220 aaKnown RBP24.23■■□□□ 1.47
HNRNPU-217ENST00000638952 CDK11AQ9UQ88 783 aaPredicted RBP24.23■■□□□ 1.47
HNRNPU-217ENST00000638952 TRIM52Q96A61 297 aa24.16■■□□□ 1.46
HNRNPU-217ENST00000638952 SLC4A1APQ9BWU0 796 aaKnown RBP24.12■■□□□ 1.45
HNRNPU-217ENST00000638952 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.45
HNRNPU-217ENST00000638952 ANP32CO43423 234 aa24.06■■□□□ 1.44
HNRNPU-217ENST00000638952 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
HNRNPU-217ENST00000638952 ABCC9O60706 1549 aa24.04■■□□□ 1.44
HNRNPU-217ENST00000638952 GLIPR1L2Q4G1C9 344 aa24.02■■□□□ 1.44
HNRNPU-217ENST00000638952 ZNF326Q5BKZ1 582 aaKnown RBP23.91■■□□□ 1.42
HNRNPU-217ENST00000638952 ANP32AP39687 249 aaKnown RBP23.9■■□□□ 1.42
HNRNPU-217ENST00000638952 ZBTB47Q9UFB7 747 aaPredicted RBP23.84■■□□□ 1.41
HNRNPU-217ENST00000638952 CSRNP3Q8WYN3 585 aa23.78■■□□□ 1.4
HNRNPU-217ENST00000638952 DCAF1Q9Y4B6 1507 aa23.77■■□□□ 1.4
HNRNPU-217ENST00000638952 NPM2Q86SE8 214 aaKnown RBP23.75■■□□□ 1.39
HNRNPU-217ENST00000638952 ANP32BQ92688 251 aaKnown RBP23.73■■□□□ 1.39
HNRNPU-217ENST00000638952 P3H3Q8IVL6 736 aa23.71■■□□□ 1.39
HNRNPU-217ENST00000638952 BCL11AQ9H165 835 aa23.67■■□□□ 1.38
HNRNPU-217ENST00000638952 CANXP27824 592 aaKnown RBP23.65■■□□□ 1.38
HNRNPU-217ENST00000638952 FKBP8Q14318 412 aa23.59■■□□□ 1.37
HNRNPU-217ENST00000638952 ARID3CA6NKF2 412 aa23.58■■□□□ 1.37
HNRNPU-217ENST00000638952 SCRIBQ14160 1630 aa23.54■■□□□ 1.36
HNRNPU-217ENST00000638952 ZCCHC6Q5VYS8 1495 aaKnown RBP23.5■■□□□ 1.35
HNRNPU-217ENST00000638952 FBLN2P98095 1184 aa23.5■■□□□ 1.35
HNRNPU-217ENST00000638952 NBR1Q14596 966 aa23.47■■□□□ 1.35
HNRNPU-217ENST00000638952 SCAF1Q9H7N4 1312 aaKnown RBP23.45■■□□□ 1.35
HNRNPU-217ENST00000638952 DDX10Q13206 875 aaKnown RBP23.42■■□□□ 1.34
HNRNPU-217ENST00000638952 HSP90AA1P07900 732 aaKnown RBP23.42■■□□□ 1.34
HNRNPU-217ENST00000638952 TONSLQ96HA7 1378 aa23.41■■□□□ 1.34
HNRNPU-217ENST00000638952 ZNF777Q9ULD5 760 aaPredicted RBP23.4■■□□□ 1.34
HNRNPU-217ENST00000638952 HNRNPUQ00839 825 aaKnown RBP eCLIP23.39■■□□□ 1.33
HNRNPU-217ENST00000638952 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
HNRNPU-217ENST00000638952 ARXQ96QS3 562 aa23.33■■□□□ 1.33
HNRNPU-217ENST00000638952 SLC24A1O60721 1099 aa23.33■■□□□ 1.32
HNRNPU-217ENST00000638952 FAM9BQ8IZU0 186 aa23.32■■□□□ 1.32
HNRNPU-217ENST00000638952 MIER1Q8N108 512 aa23.29■■□□□ 1.32
HNRNPU-217ENST00000638952 UPF2Q9HAU5 1272 aaKnown RBP23.28■■□□□ 1.32
HNRNPU-217ENST00000638952 NEFMP07197 916 aa23.22■■□□□ 1.31
HNRNPU-217ENST00000638952 SALL2Q9Y467 1007 aaPredicted RBP23.16■■□□□ 1.3
HNRNPU-217ENST00000638952 CHIC2Q9UKJ5 165 aa23.14■■□□□ 1.29
HNRNPU-217ENST00000638952 IRX6P78412 446 aaPredicted RBP23.1■■□□□ 1.29
HNRNPU-217ENST00000638952 CCDC136Q96JN2 1154 aa23.1■■□□□ 1.29
HNRNPU-217ENST00000638952 TNNT2P45379 298 aaPredicted RBP23.09■■□□□ 1.29
HNRNPU-217ENST00000638952 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
HNRNPU-217ENST00000638952 CLIP1P30622 1438 aa23.06■■□□□ 1.28
HNRNPU-217ENST00000638952 CCDC180Q9P1Z9 1646 aa23.05■■□□□ 1.28
HNRNPU-217ENST00000638952 MRS2Q9HD23 443 aa23.04■■□□□ 1.28
HNRNPU-217ENST00000638952 TMC1Q8TDI8 760 aa23.04■■□□□ 1.28
HNRNPU-217ENST00000638952 TRIM44Q96DX7 344 aaPredicted RBP22.98■■□□□ 1.27
HNRNPU-217ENST00000638952 CEP162Q5TB80 1403 aa22.97■■□□□ 1.27
HNRNPU-217ENST00000638952 CHGAP10645 457 aaKnown RBP22.96■■□□□ 1.27
HNRNPU-217ENST00000638952 ANP32EQ9BTT0 268 aa22.95■■□□□ 1.26
HNRNPU-217ENST00000638952 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
HNRNPU-217ENST00000638952 KDM2AQ9Y2K7 1162 aa22.91■■□□□ 1.26
HNRNPU-217ENST00000638952 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
HNRNPU-217ENST00000638952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.267e-11■■□□□ 14
HNRNPU-217ENST00000638952 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.88■■□□□ 1.25
HNRNPU-217ENST00000638952 WDR43Q15061 677 aaKnown RBP eCLIP22.88■■□□□ 1.252e-6■■□□□ 12.7
HNRNPU-217ENST00000638952 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms