RNA–Protein interactions for RNA: ENST00000539476.5

PITPNA-202, Transcript of phosphatidylinositol transfer protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PITPNA, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNA-202ENST00000539476 NISCHQ9Y2I1 1504 aa35.24■■■■□ 3.23
PITPNA-202ENST00000539476 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
PITPNA-202ENST00000539476 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
PITPNA-202ENST00000539476 SHROOM4Q9ULL8 1493 aa29.24■■■□□ 2.27
PITPNA-202ENST00000539476 SUPT5HO00267 1087 aaKnown RBP29.21■■■□□ 2.27
PITPNA-202ENST00000539476 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
PITPNA-202ENST00000539476 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
PITPNA-202ENST00000539476 ABCC9O60706 1549 aa28.82■■■□□ 2.2
PITPNA-202ENST00000539476 PCGF6Q9BYE7 350 aa28.66■■■□□ 2.18
PITPNA-202ENST00000539476 MYO15BQ96JP2 1530 aa28.62■■■□□ 2.17
PITPNA-202ENST00000539476 PPARGC1BQ86YN6 1023 aaKnown RBP28.52■■■□□ 2.16
PITPNA-202ENST00000539476 HRCP23327 699 aa28.46■■■□□ 2.15
PITPNA-202ENST00000539476 NACADO15069 1562 aa28.4■■■□□ 2.14
PITPNA-202ENST00000539476 SCRIBQ14160 1630 aa28.26■■■□□ 2.11
PITPNA-202ENST00000539476 RB1CC1Q8TDY2 1594 aa28.12■■■□□ 2.09
PITPNA-202ENST00000539476 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
PITPNA-202ENST00000539476 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
PITPNA-202ENST00000539476 LOC105371045A0A1W2PR82 267 aa27.73■■■□□ 2.03
PITPNA-202ENST00000539476 EHMT2Q96KQ7 1210 aa27.72■■■□□ 2.03
PITPNA-202ENST00000539476 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
PITPNA-202ENST00000539476 RSF1Q96T23 1441 aaPredicted RBP27.44■■□□□ 1.98
PITPNA-202ENST00000539476 BICRAQ9NZM4 1560 aa27.44■■□□□ 1.98
PITPNA-202ENST00000539476 MROH2BQ7Z745 1585 aa27.3■■□□□ 1.96
PITPNA-202ENST00000539476 FAM9AQ8IZU1 332 aaPredicted RBP27.29■■□□□ 1.96
PITPNA-202ENST00000539476 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
PITPNA-202ENST00000539476 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
PITPNA-202ENST00000539476 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.93
PITPNA-202ENST00000539476 WIZO95785 1651 aa27.12■■□□□ 1.93
PITPNA-202ENST00000539476 PELP1Q8IZL8 1130 aaKnown RBP27.1■■□□□ 1.93
PITPNA-202ENST00000539476 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
PITPNA-202ENST00000539476 SCAF1Q9H7N4 1312 aaKnown RBP27.01■■□□□ 1.91
PITPNA-202ENST00000539476 TTBK1Q5TCY1 1321 aaPredicted RBP26.91■■□□□ 1.9
PITPNA-202ENST00000539476 ZEB1P37275 1124 aaPredicted RBP26.79■■□□□ 1.88
PITPNA-202ENST00000539476 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
PITPNA-202ENST00000539476 PEG3Q9GZU2 1588 aa26.7■■□□□ 1.87
PITPNA-202ENST00000539476 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
PITPNA-202ENST00000539476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.61■■□□□ 1.85
PITPNA-202ENST00000539476 CCER1Q8TC90 406 aaPredicted RBP26.61■■□□□ 1.85
PITPNA-202ENST00000539476 SMARCA2P51531 1590 aa26.55■■□□□ 1.84
PITPNA-202ENST00000539476 ATAD2BQ9ULI0 1458 aa26.55■■□□□ 1.84
PITPNA-202ENST00000539476 YTHDC1Q96MU7 727 aaKnown RBP26.54■■□□□ 1.84
PITPNA-202ENST00000539476 EIF4G1Q04637 1599 aaKnown RBP26.52■■□□□ 1.84
PITPNA-202ENST00000539476 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
PITPNA-202ENST00000539476 GTF3C3Q9Y5Q9 886 aa26.5■■□□□ 1.83
PITPNA-202ENST00000539476 NEUROD1Q13562 356 aa26.47■■□□□ 1.83
PITPNA-202ENST00000539476 ACIN1Q9UKV3 1341 aaKnown RBP26.37■■□□□ 1.81
PITPNA-202ENST00000539476 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
PITPNA-202ENST00000539476 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
PITPNA-202ENST00000539476 DIEXFQ68CQ4 756 aaKnown RBP26.26■■□□□ 1.79
PITPNA-202ENST00000539476 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
PITPNA-202ENST00000539476 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
PITPNA-202ENST00000539476 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
PITPNA-202ENST00000539476 ABCC8Q09428 1581 aa26.08■■□□□ 1.77
PITPNA-202ENST00000539476 MYT1Q01538 1121 aa25.88■■□□□ 1.73
PITPNA-202ENST00000539476 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
PITPNA-202ENST00000539476 WRNQ14191 1432 aaPredicted RBP eCLIP25.76■■□□□ 1.714e-6■■■■□ 21.5
PITPNA-202ENST00000539476 RANGAP1P46060 587 aaPredicted RBP25.75■■□□□ 1.71
PITPNA-202ENST00000539476 CFTRP13569 1480 aa25.75■■□□□ 1.71
PITPNA-202ENST00000539476 HNRNPUL2Q1KMD3 747 aaKnown RBP25.7■■□□□ 1.7
PITPNA-202ENST00000539476 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
PITPNA-202ENST00000539476 UBTFP17480 764 aaKnown RBP25.62■■□□□ 1.69
PITPNA-202ENST00000539476 SOGA1O94964 1423 aa25.61■■□□□ 1.69
PITPNA-202ENST00000539476 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
PITPNA-202ENST00000539476 ZNF316A6NFI3 1004 aaPredicted RBP25.58■■□□□ 1.69
PITPNA-202ENST00000539476 TOP2BQ02880 1626 aa25.57■■□□□ 1.68
PITPNA-202ENST00000539476 MIER1Q8N108 512 aa25.56■■□□□ 1.68
PITPNA-202ENST00000539476 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
PITPNA-202ENST00000539476 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
PITPNA-202ENST00000539476 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
PITPNA-202ENST00000539476 CUX1P39880 1505 aa25.5■■□□□ 1.67
PITPNA-202ENST00000539476 NESP48681 1621 aa25.44■■□□□ 1.66
PITPNA-202ENST00000539476 EEA1Q15075 1411 aa25.39■■□□□ 1.65
PITPNA-202ENST00000539476 FANCD2Q9BXW9 1451 aa25.33■■□□□ 1.65
PITPNA-202ENST00000539476 CSRNP3Q8WYN3 585 aa25.31■■□□□ 1.64
PITPNA-202ENST00000539476 BCANQ96GW7 911 aa25.31■■□□□ 1.64
PITPNA-202ENST00000539476 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
PITPNA-202ENST00000539476 APLP2Q06481 763 aa25.25■■□□□ 1.63
PITPNA-202ENST00000539476 KIF21BO75037 1637 aa25.17■■□□□ 1.62
PITPNA-202ENST00000539476 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
PITPNA-202ENST00000539476 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
PITPNA-202ENST00000539476 GOLGA3Q08378 1498 aa25.13■■□□□ 1.61
PITPNA-202ENST00000539476 KIF21AQ7Z4S6 1674 aa25.12■■□□□ 1.61
PITPNA-202ENST00000539476 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
PITPNA-202ENST00000539476 TOPBP1Q92547 1522 aa25.1■■□□□ 1.61
PITPNA-202ENST00000539476 TNIKQ9UKE5 1360 aa25.09■■□□□ 1.61
PITPNA-202ENST00000539476 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
PITPNA-202ENST00000539476 RAPGEF2Q9Y4G8 1499 aa25.06■■□□□ 1.6
PITPNA-202ENST00000539476 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
PITPNA-202ENST00000539476 ITGAEP38570 1179 aa25.04■■□□□ 1.6
PITPNA-202ENST00000539476 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
PITPNA-202ENST00000539476 CEP162Q5TB80 1403 aa25.02■■□□□ 1.6
PITPNA-202ENST00000539476 PRXQ9BXM0 1461 aa25.01■■□□□ 1.59
PITPNA-202ENST00000539476 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
PITPNA-202ENST00000539476 CUX2O14529 1486 aa24.99■■□□□ 1.59
PITPNA-202ENST00000539476 RAD54L2Q9Y4B4 1467 aa24.97■■□□□ 1.59
PITPNA-202ENST00000539476 SUPT16HQ9Y5B9 1047 aaKnown RBP24.95■■□□□ 1.58
PITPNA-202ENST00000539476 ERICH3Q5RHP9 1530 aa24.94■■□□□ 1.58
PITPNA-202ENST00000539476 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
PITPNA-202ENST00000539476 WDR97A6NE52 1622 aa24.89■■□□□ 1.58
PITPNA-202ENST00000539476 IGF1RP08069 1367 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms