RNA–Protein interactions for RNA: ENST00000288828.8

WIPI2-201, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 1 (best) BASIC

Gene WIPI2, Length 4,476 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-201ENST00000288828 NISCHQ9Y2I1 1504 aa30.95■■■□□ 2.55
WIPI2-201ENST00000288828 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
WIPI2-201ENST00000288828 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
WIPI2-201ENST00000288828 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
WIPI2-201ENST00000288828 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.11
WIPI2-201ENST00000288828 PCGF6Q9BYE7 350 aa27.87■■■□□ 2.05
WIPI2-201ENST00000288828 FAM9AQ8IZU1 332 aaPredicted RBP27.77■■■□□ 2.04
WIPI2-201ENST00000288828 TRIM41Q8WV44 630 aa27.39■■□□□ 1.98
WIPI2-201ENST00000288828 APLP2Q06481 763 aa27.3■■□□□ 1.96
WIPI2-201ENST00000288828 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
WIPI2-201ENST00000288828 ZEB1P37275 1124 aaPredicted RBP27.07■■□□□ 1.92
WIPI2-201ENST00000288828 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
WIPI2-201ENST00000288828 CCER1Q8TC90 406 aaPredicted RBP26.94■■□□□ 1.9
WIPI2-201ENST00000288828 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
WIPI2-201ENST00000288828 PELP1Q8IZL8 1130 aaKnown RBP26.83■■□□□ 1.89
WIPI2-201ENST00000288828 HRCP23327 699 aa26.83■■□□□ 1.89
WIPI2-201ENST00000288828 LOC105371045A0A1W2PR82 267 aa26.81■■□□□ 1.88
WIPI2-201ENST00000288828 UBTFP17480 764 aaKnown RBP26.79■■□□□ 1.88
WIPI2-201ENST00000288828 TRIM26Q12899 539 aaPredicted RBP26.77■■□□□ 1.88
WIPI2-201ENST00000288828 PPARGC1BQ86YN6 1023 aaKnown RBP26.71■■□□□ 1.87
WIPI2-201ENST00000288828 CENPBP07199 599 aaPredicted RBP26.68■■□□□ 1.86
WIPI2-201ENST00000288828 ATP1B4Q9UN42 357 aaPredicted RBP26.34■■□□□ 1.81
WIPI2-201ENST00000288828 YTHDC1Q96MU7 727 aaKnown RBP26.24■■□□□ 1.79
WIPI2-201ENST00000288828 HNRNPUL2Q1KMD3 747 aaKnown RBP25.98■■□□□ 1.75
WIPI2-201ENST00000288828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.97■■□□□ 1.75
WIPI2-201ENST00000288828 ABCC9O60706 1549 aa25.9■■□□□ 1.74
WIPI2-201ENST00000288828 ITGAEP38570 1179 aa25.87■■□□□ 1.73
WIPI2-201ENST00000288828 NEFLP07196 543 aa25.77■■□□□ 1.72
WIPI2-201ENST00000288828 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
WIPI2-201ENST00000288828 DIEXFQ68CQ4 756 aaKnown RBP25.7■■□□□ 1.7
WIPI2-201ENST00000288828 ERICH6Q7L0X2 663 aa25.68■■□□□ 1.7
WIPI2-201ENST00000288828 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.7
WIPI2-201ENST00000288828 MYT1Q01538 1121 aa25.42■■□□□ 1.66
WIPI2-201ENST00000288828 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
WIPI2-201ENST00000288828 CSRNP3Q8WYN3 585 aa25.34■■□□□ 1.65
WIPI2-201ENST00000288828 SCRIBQ14160 1630 aa25.27■■□□□ 1.64
WIPI2-201ENST00000288828 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
WIPI2-201ENST00000288828 FAM50AQ14320 339 aaKnown RBP25.25■■□□□ 1.63
WIPI2-201ENST00000288828 POLR3GLQ9BT43 218 aa25.22■■□□□ 1.63
WIPI2-201ENST00000288828 GTF3C3Q9Y5Q9 886 aa25.22■■□□□ 1.63
WIPI2-201ENST00000288828 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
WIPI2-201ENST00000288828 ZNF316A6NFI3 1004 aaPredicted RBP25.18■■□□□ 1.62
WIPI2-201ENST00000288828 CNGB1Q14028 1251 aaPredicted RBP25.11■■□□□ 1.61
WIPI2-201ENST00000288828 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
WIPI2-201ENST00000288828 ACIN1Q9UKV3 1341 aaKnown RBP25.02■■□□□ 1.6
WIPI2-201ENST00000288828 TRIM52Q96A61 297 aa24.92■■□□□ 1.58
WIPI2-201ENST00000288828 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
WIPI2-201ENST00000288828 P3H3Q8IVL6 736 aa24.85■■□□□ 1.57
WIPI2-201ENST00000288828 MYT1LQ9UL68 1186 aa24.85■■□□□ 1.57
WIPI2-201ENST00000288828 BCANQ96GW7 911 aa24.81■■□□□ 1.56
WIPI2-201ENST00000288828 ANP32CO43423 234 aa24.79■■□□□ 1.56
WIPI2-201ENST00000288828 DAXXQ9UER7 740 aaPredicted RBP24.63■■□□□ 1.53
WIPI2-201ENST00000288828 ZNF326Q5BKZ1 582 aaKnown RBP24.61■■□□□ 1.53
WIPI2-201ENST00000288828 ARID3CA6NKF2 412 aa24.56■■□□□ 1.52
WIPI2-201ENST00000288828 CLIP1P30622 1438 aa24.52■■□□□ 1.52
WIPI2-201ENST00000288828 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
WIPI2-201ENST00000288828 CEP162Q5TB80 1403 aa24.51■■□□□ 1.51
WIPI2-201ENST00000288828 FBLN2P98095 1184 aa24.49■■□□□ 1.51
WIPI2-201ENST00000288828 EEA1Q15075 1411 aa24.44■■□□□ 1.5
WIPI2-201ENST00000288828 DDX10Q13206 875 aaKnown RBP24.42■■□□□ 1.5
WIPI2-201ENST00000288828 SLC4A1APQ9BWU0 796 aaKnown RBP24.42■■□□□ 1.5
WIPI2-201ENST00000288828 MIER1Q8N108 512 aa24.42■■□□□ 1.5
WIPI2-201ENST00000288828 CDK11AQ9UQ88 783 aaPredicted RBP24.41■■□□□ 1.5
WIPI2-201ENST00000288828 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.5
WIPI2-201ENST00000288828 TONSLQ96HA7 1378 aa24.39■■□□□ 1.49
WIPI2-201ENST00000288828 NACADO15069 1562 aa24.37■■□□□ 1.49
WIPI2-201ENST00000288828 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
WIPI2-201ENST00000288828 CECR2Q9BXF3 1484 aa24.37■■□□□ 1.49
WIPI2-201ENST00000288828 RTL5Q5HYW3 569 aaPredicted RBP24.35■■□□□ 1.49
WIPI2-201ENST00000288828 WRNQ14191 1432 aaPredicted RBP eCLIP24.34■■□□□ 1.49
WIPI2-201ENST00000288828 TNIKQ9UKE5 1360 aa24.33■■□□□ 1.49
WIPI2-201ENST00000288828 CLSPNQ9HAW4 1339 aa24.32■■□□□ 1.48
WIPI2-201ENST00000288828 FKBP8Q14318 412 aa24.3■■□□□ 1.48
WIPI2-201ENST00000288828 ZNF777Q9ULD5 760 aaPredicted RBP24.29■■□□□ 1.48
WIPI2-201ENST00000288828 HNRNPUQ00839 825 aaKnown RBP eCLIP24.21■■□□□ 1.47
WIPI2-201ENST00000288828 CHIC2Q9UKJ5 165 aa24.2■■□□□ 1.46
WIPI2-201ENST00000288828 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
WIPI2-201ENST00000288828 CEP164Q9UPV0 1460 aa24.15■■□□□ 1.46
WIPI2-201ENST00000288828 HIRIP3Q9BW71 556 aaPredicted RBP24.14■■□□□ 1.46
WIPI2-201ENST00000288828 MTUS2Q5JR59 1369 aa24.13■■□□□ 1.45
WIPI2-201ENST00000288828 SOGA1O94964 1423 aa24.1■■□□□ 1.45
WIPI2-201ENST00000288828 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
WIPI2-201ENST00000288828 FAM9BQ8IZU0 186 aa24.08■■□□□ 1.45
WIPI2-201ENST00000288828 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
WIPI2-201ENST00000288828 KIF27Q86VH2 1401 aa24.01■■□□□ 1.43
WIPI2-201ENST00000288828 RRP7BPQ9NSQ0 103 aa23.94■■□□□ 1.42
WIPI2-201ENST00000288828 ANP32AP39687 249 aaKnown RBP23.92■■□□□ 1.42
WIPI2-201ENST00000288828 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
WIPI2-201ENST00000288828 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
WIPI2-201ENST00000288828 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
WIPI2-201ENST00000288828 EIF4G2P78344 907 aaKnown RBP eCLIP23.87■■□□□ 1.41
WIPI2-201ENST00000288828 CANXP27824 592 aaKnown RBP23.86■■□□□ 1.41
WIPI2-201ENST00000288828 TMC1Q8TDI8 760 aa23.85■■□□□ 1.41
WIPI2-201ENST00000288828 SALL2Q9Y467 1007 aaPredicted RBP23.84■■□□□ 1.41
WIPI2-201ENST00000288828 IRX6P78412 446 aaPredicted RBP23.82■■□□□ 1.4
WIPI2-201ENST00000288828 NPM2Q86SE8 214 aaKnown RBP23.82■■□□□ 1.4
WIPI2-201ENST00000288828 SIN3AQ96ST3 1273 aa23.82■■□□□ 1.4
WIPI2-201ENST00000288828 TSPY4P0CV99 314 aa23.81■■□□□ 1.4
WIPI2-201ENST00000288828 TSPY10P0CW01 314 aa23.81■■□□□ 1.4
WIPI2-201ENST00000288828 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms