RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 NISCHQ9Y2I1 1504 aa24.21■■□□□ 1.47
CPEB4-207ENST00000519835 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
CPEB4-207ENST00000519835 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
CPEB4-207ENST00000519835 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
CPEB4-207ENST00000519835 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
CPEB4-207ENST00000519835 MYO15BQ96JP2 1530 aa20■□□□□ 0.79
CPEB4-207ENST00000519835 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
CPEB4-207ENST00000519835 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
CPEB4-207ENST00000519835 HRCP23327 699 aa19.87■□□□□ 0.77
CPEB4-207ENST00000519835 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
CPEB4-207ENST00000519835 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
CPEB4-207ENST00000519835 ABCC9O60706 1549 aa19.52■□□□□ 0.72
CPEB4-207ENST00000519835 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
CPEB4-207ENST00000519835 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
CPEB4-207ENST00000519835 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
CPEB4-207ENST00000519835 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
CPEB4-207ENST00000519835 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
CPEB4-207ENST00000519835 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
CPEB4-207ENST00000519835 ZEB1P37275 1124 aaPredicted RBP19.04■□□□□ 0.64
CPEB4-207ENST00000519835 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
CPEB4-207ENST00000519835 NACADO15069 1562 aa18.92■□□□□ 0.62
CPEB4-207ENST00000519835 MROH2BQ7Z745 1585 aa18.77■□□□□ 0.6
CPEB4-207ENST00000519835 CECR2Q9BXF3 1484 aa18.75■□□□□ 0.59
CPEB4-207ENST00000519835 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
CPEB4-207ENST00000519835 WIZO95785 1651 aa18.73■□□□□ 0.59
CPEB4-207ENST00000519835 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
CPEB4-207ENST00000519835 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
CPEB4-207ENST00000519835 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
CPEB4-207ENST00000519835 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
CPEB4-207ENST00000519835 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
CPEB4-207ENST00000519835 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
CPEB4-207ENST00000519835 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
CPEB4-207ENST00000519835 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
CPEB4-207ENST00000519835 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
CPEB4-207ENST00000519835 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
CPEB4-207ENST00000519835 CCER1Q8TC90 406 aaPredicted RBP18.35■□□□□ 0.53
CPEB4-207ENST00000519835 EEA1Q15075 1411 aa18.34■□□□□ 0.53
CPEB4-207ENST00000519835 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
CPEB4-207ENST00000519835 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
CPEB4-207ENST00000519835 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
CPEB4-207ENST00000519835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
CPEB4-207ENST00000519835 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
CPEB4-207ENST00000519835 ACIN1Q9UKV3 1341 aaKnown RBP18.22■□□□□ 0.51
CPEB4-207ENST00000519835 SOGA1O94964 1423 aa18.18■□□□□ 0.5
CPEB4-207ENST00000519835 GOLGA3Q08378 1498 aa18.18■□□□□ 0.5
CPEB4-207ENST00000519835 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
CPEB4-207ENST00000519835 CENPBP07199 599 aaPredicted RBP18.15■□□□□ 0.5
CPEB4-207ENST00000519835 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
CPEB4-207ENST00000519835 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
CPEB4-207ENST00000519835 KIF21BO75037 1637 aa18.1■□□□□ 0.49
CPEB4-207ENST00000519835 NEUROD1Q13562 356 aa18.1■□□□□ 0.49
CPEB4-207ENST00000519835 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
CPEB4-207ENST00000519835 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
CPEB4-207ENST00000519835 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.48
CPEB4-207ENST00000519835 TTBK1Q5TCY1 1321 aaPredicted RBP18■□□□□ 0.47
CPEB4-207ENST00000519835 SYNJ1O43426 1573 aa17.98■□□□□ 0.47
CPEB4-207ENST00000519835 BICRAQ9NZM4 1560 aa17.98■□□□□ 0.47
CPEB4-207ENST00000519835 ZNF316A6NFI3 1004 aaPredicted RBP17.97■□□□□ 0.47
CPEB4-207ENST00000519835 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
CPEB4-207ENST00000519835 GTF3C3Q9Y5Q9 886 aa17.96■□□□□ 0.47
CPEB4-207ENST00000519835 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
CPEB4-207ENST00000519835 CLIP1P30622 1438 aa17.91■□□□□ 0.46
CPEB4-207ENST00000519835 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
CPEB4-207ENST00000519835 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
CPEB4-207ENST00000519835 MYT1Q01538 1121 aa17.79■□□□□ 0.44
CPEB4-207ENST00000519835 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
CPEB4-207ENST00000519835 RAPGEF2Q9Y4G8 1499 aa17.78■□□□□ 0.44
CPEB4-207ENST00000519835 APLP2Q06481 763 aa17.76■□□□□ 0.43
CPEB4-207ENST00000519835 ERICH3Q5RHP9 1530 aa17.75■□□□□ 0.43
CPEB4-207ENST00000519835 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
CPEB4-207ENST00000519835 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
CPEB4-207ENST00000519835 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
CPEB4-207ENST00000519835 MIER1Q8N108 512 aa17.67■□□□□ 0.42
CPEB4-207ENST00000519835 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
CPEB4-207ENST00000519835 PRXQ9BXM0 1461 aa17.63■□□□□ 0.41
CPEB4-207ENST00000519835 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
CPEB4-207ENST00000519835 DHX57Q6P158 1386 aaKnown RBP17.58■□□□□ 0.4
CPEB4-207ENST00000519835 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
CPEB4-207ENST00000519835 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
CPEB4-207ENST00000519835 CUX2O14529 1486 aa17.54■□□□□ 0.4
CPEB4-207ENST00000519835 CUX1P39880 1505 aa17.49■□□□□ 0.39
CPEB4-207ENST00000519835 KIF27Q86VH2 1401 aa17.49■□□□□ 0.39
CPEB4-207ENST00000519835 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
CPEB4-207ENST00000519835 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.39
CPEB4-207ENST00000519835 NCAPD3P42695 1498 aa17.43■□□□□ 0.38
CPEB4-207ENST00000519835 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
CPEB4-207ENST00000519835 ARHGAP35Q9NRY4 1499 aa17.4■□□□□ 0.38
CPEB4-207ENST00000519835 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
CPEB4-207ENST00000519835 MAP3K1Q13233 1512 aa17.38■□□□□ 0.37
CPEB4-207ENST00000519835 CFTRP13569 1480 aa17.37■□□□□ 0.37
CPEB4-207ENST00000519835 TIAM1Q13009 1591 aa17.34■□□□□ 0.37
CPEB4-207ENST00000519835 CFAP43Q8NDM7 1665 aa17.29■□□□□ 0.36
CPEB4-207ENST00000519835 MAPKBP1O60336 1514 aa17.29■□□□□ 0.36
CPEB4-207ENST00000519835 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.36
CPEB4-207ENST00000519835 RAB3GAP2Q9H2M9 1393 aa17.25■□□□□ 0.35
CPEB4-207ENST00000519835 LRRC9Q6ZRR7 1453 aa17.22■□□□□ 0.35
CPEB4-207ENST00000519835 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
CPEB4-207ENST00000519835 FHAD1B1AJZ9 1412 aa17.19■□□□□ 0.34
CPEB4-207ENST00000519835 IGF1RP08069 1367 aa17.18■□□□□ 0.34
CPEB4-207ENST00000519835 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms