RNA–Protein interactions for RNA: ENST00000447875.5

THRB-211, Transcript of thyroid hormone receptor beta, humanhuman

TSL 1 (best)

Gene THRB, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRB-211ENST00000447875 NISCHQ9Y2I1 1504 aa24.87■■□□□ 1.57
THRB-211ENST00000447875 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
THRB-211ENST00000447875 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
THRB-211ENST00000447875 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
THRB-211ENST00000447875 ABCC9O60706 1549 aa22.31■■□□□ 1.16
THRB-211ENST00000447875 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
THRB-211ENST00000447875 NACADO15069 1562 aa21.21■□□□□ 0.99
THRB-211ENST00000447875 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
THRB-211ENST00000447875 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
THRB-211ENST00000447875 SENP3Q9H4L4 574 aaPredicted RBP20.85■□□□□ 0.93
THRB-211ENST00000447875 DNAJC5BQ9UF47 199 aa20.85■□□□□ 0.93
THRB-211ENST00000447875 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
THRB-211ENST00000447875 PABPN1Q86U42 306 aaKnown RBP eCLIP20.69■□□□□ 0.9
THRB-211ENST00000447875 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
THRB-211ENST00000447875 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
THRB-211ENST00000447875 BICRAQ9NZM4 1560 aa20.63■□□□□ 0.89
THRB-211ENST00000447875 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
THRB-211ENST00000447875 SHROOM4Q9ULL8 1493 aa20.58■□□□□ 0.89
THRB-211ENST00000447875 SCRIBQ14160 1630 aa20.31■□□□□ 0.84
THRB-211ENST00000447875 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
THRB-211ENST00000447875 EIF4G1Q04637 1599 aaKnown RBP20.18■□□□□ 0.82
THRB-211ENST00000447875 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
THRB-211ENST00000447875 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
THRB-211ENST00000447875 FOXD1Q16676 465 aa19.47■□□□□ 0.71
THRB-211ENST00000447875 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
THRB-211ENST00000447875 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
THRB-211ENST00000447875 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
THRB-211ENST00000447875 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
THRB-211ENST00000447875 CUX2O14529 1486 aa19.4■□□□□ 0.7
THRB-211ENST00000447875 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
THRB-211ENST00000447875 ERCC6Q03468 1493 aa19.36■□□□□ 0.69
THRB-211ENST00000447875 DNAJC5Q9H3Z4 198 aa19.33■□□□□ 0.68
THRB-211ENST00000447875 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
THRB-211ENST00000447875 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
THRB-211ENST00000447875 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
THRB-211ENST00000447875 NESP48681 1621 aa19.11■□□□□ 0.65
THRB-211ENST00000447875 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
THRB-211ENST00000447875 THOC2Q8NI27 1593 aaKnown RBP19.04■□□□□ 0.64
THRB-211ENST00000447875 PDS5BQ9NTI5 1447 aa19.03■□□□□ 0.64
THRB-211ENST00000447875 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
THRB-211ENST00000447875 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
THRB-211ENST00000447875 WIZO95785 1651 aa18.86■□□□□ 0.61
THRB-211ENST00000447875 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
THRB-211ENST00000447875 WDR62O43379 1518 aa18.8■□□□□ 0.6
THRB-211ENST00000447875 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
THRB-211ENST00000447875 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
THRB-211ENST00000447875 TOP2AP11388 1531 aaKnown RBP18.71■□□□□ 0.59
THRB-211ENST00000447875 CFTRP13569 1480 aa18.71■□□□□ 0.59
THRB-211ENST00000447875 RSF1Q96T23 1441 aaPredicted RBP18.7■□□□□ 0.58
THRB-211ENST00000447875 FANCD2Q9BXW9 1451 aa18.7■□□□□ 0.58
THRB-211ENST00000447875 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
THRB-211ENST00000447875 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
THRB-211ENST00000447875 OSCARQ8IYS5 282 aa18.43■□□□□ 0.54
THRB-211ENST00000447875 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
THRB-211ENST00000447875 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
THRB-211ENST00000447875 IFT140Q96RY7 1462 aa18.4■□□□□ 0.54
THRB-211ENST00000447875 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
THRB-211ENST00000447875 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
THRB-211ENST00000447875 TOPBP1Q92547 1522 aa18.33■□□□□ 0.52
THRB-211ENST00000447875 ADRA2BP18089 450 aa18.31■□□□□ 0.52
THRB-211ENST00000447875 DNMBPQ6XZF7 1577 aa18.3■□□□□ 0.52
THRB-211ENST00000447875 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
THRB-211ENST00000447875 EIF4G3O43432 1585 aaKnown RBP18.23■□□□□ 0.51
THRB-211ENST00000447875 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
THRB-211ENST00000447875 RIMBP3CA6NJZ7 1639 aa18.18■□□□□ 0.5
THRB-211ENST00000447875 RIMBP3BA6NNM3 1639 aa18.18■□□□□ 0.5
THRB-211ENST00000447875 RIMBP3Q9UFD9 1639 aa18.18■□□□□ 0.5
THRB-211ENST00000447875 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
THRB-211ENST00000447875 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
THRB-211ENST00000447875 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
THRB-211ENST00000447875 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
THRB-211ENST00000447875 MSH5O43196 834 aa18.09■□□□□ 0.49
THRB-211ENST00000447875 AQRO60306 1485 aaKnown RBP eCLIP18.08■□□□□ 0.49
THRB-211ENST00000447875 CHD1O14646 1710 aa18.08■□□□□ 0.48
THRB-211ENST00000447875 SOGA1O94964 1423 aa18.05■□□□□ 0.48
THRB-211ENST00000447875 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
THRB-211ENST00000447875 RAD54L2Q9Y4B4 1467 aa18■□□□□ 0.47
THRB-211ENST00000447875 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
THRB-211ENST00000447875 FBLN2P98095 1184 aa17.98■□□□□ 0.47
THRB-211ENST00000447875 TDRD9Q8NDG6 1382 aaKnown RBP17.96■□□□□ 0.47
THRB-211ENST00000447875 CUX1P39880 1505 aa17.96■□□□□ 0.47
THRB-211ENST00000447875 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
THRB-211ENST00000447875 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
THRB-211ENST00000447875 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
THRB-211ENST00000447875 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
THRB-211ENST00000447875 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
THRB-211ENST00000447875 SYNJ2O15056 1496 aa17.9■□□□□ 0.46
THRB-211ENST00000447875 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
THRB-211ENST00000447875 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
THRB-211ENST00000447875 PBRM1Q86U86 1689 aa17.86■□□□□ 0.45
THRB-211ENST00000447875 GAPVD1Q14C86 1478 aa17.85■□□□□ 0.45
THRB-211ENST00000447875 ABCA10Q8WWZ4 1543 aa17.85■□□□□ 0.45
THRB-211ENST00000447875 ABCA5Q8WWZ7 1642 aa17.82■□□□□ 0.44
THRB-211ENST00000447875 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
THRB-211ENST00000447875 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
THRB-211ENST00000447875 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
THRB-211ENST00000447875 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
THRB-211ENST00000447875 TOP2BQ02880 1626 aa17.73■□□□□ 0.43
THRB-211ENST00000447875 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
THRB-211ENST00000447875 ADAMTS12P58397 1594 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms