RNA–Protein interactions for RNA: ENST00000468690.2

HNRNPU-207, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-207ENST00000468690 NISCHQ9Y2I1 1504 aa14.53□□□□□ -0.08
HNRNPU-207ENST00000468690 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
HNRNPU-207ENST00000468690 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
HNRNPU-207ENST00000468690 SHROOM4Q9ULL8 1493 aa12.84□□□□□ -0.35
HNRNPU-207ENST00000468690 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.44
HNRNPU-207ENST00000468690 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
HNRNPU-207ENST00000468690 ZCCHC6Q5VYS8 1495 aaKnown RBP12.13□□□□□ -0.47
HNRNPU-207ENST00000468690 APLP2Q06481 763 aa12.12□□□□□ -0.47
HNRNPU-207ENST00000468690 FAM9AQ8IZU1 332 aaPredicted RBP12.01□□□□□ -0.49
HNRNPU-207ENST00000468690 ABCC9O60706 1549 aa12.01□□□□□ -0.49
HNRNPU-207ENST00000468690 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.49
HNRNPU-207ENST00000468690 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
HNRNPU-207ENST00000468690 CHIC1Q5VXU3 224 aa11.92□□□□□ -0.5
HNRNPU-207ENST00000468690 DCAF1Q9Y4B6 1507 aa11.85□□□□□ -0.51
HNRNPU-207ENST00000468690 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
HNRNPU-207ENST00000468690 UBTFP17480 764 aaKnown RBP11.82□□□□□ -0.52
HNRNPU-207ENST00000468690 NACADO15069 1562 aa11.76□□□□□ -0.53
HNRNPU-207ENST00000468690 TRIM26Q12899 539 aaPredicted RBP11.74□□□□□ -0.53
HNRNPU-207ENST00000468690 RB1CC1Q8TDY2 1594 aa11.73□□□□□ -0.53
HNRNPU-207ENST00000468690 SCRIBQ14160 1630 aa11.72□□□□□ -0.53
HNRNPU-207ENST00000468690 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.55
HNRNPU-207ENST00000468690 CCER1Q8TC90 406 aaPredicted RBP11.64□□□□□ -0.55
HNRNPU-207ENST00000468690 PABPN1Q86U42 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
HNRNPU-207ENST00000468690 MYO15BQ96JP2 1530 aa11.59□□□□□ -0.55
HNRNPU-207ENST00000468690 RANGAP1P46060 587 aaPredicted RBP11.57□□□□□ -0.56
HNRNPU-207ENST00000468690 LOC105371045A0A1W2PR82 267 aa11.56□□□□□ -0.56
HNRNPU-207ENST00000468690 TTBK1Q5TCY1 1321 aaPredicted RBP11.55□□□□□ -0.56
HNRNPU-207ENST00000468690 ATP1B4Q9UN42 357 aaPredicted RBP11.52□□□□□ -0.56
HNRNPU-207ENST00000468690 HRCP23327 699 aa11.52□□□□□ -0.56
HNRNPU-207ENST00000468690 CENPBP07199 599 aaPredicted RBP11.5□□□□□ -0.57
HNRNPU-207ENST00000468690 RSF1Q96T23 1441 aaPredicted RBP11.46□□□□□ -0.57
HNRNPU-207ENST00000468690 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
HNRNPU-207ENST00000468690 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
HNRNPU-207ENST00000468690 EEA1Q15075 1411 aa11.36□□□□□ -0.59
HNRNPU-207ENST00000468690 PPARGC1BQ86YN6 1023 aaKnown RBP11.33□□□□□ -0.6
HNRNPU-207ENST00000468690 BAZ1BQ9UIG0 1483 aaKnown RBP11.26□□□□□ -0.61
HNRNPU-207ENST00000468690 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
HNRNPU-207ENST00000468690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
HNRNPU-207ENST00000468690 ITGAEP38570 1179 aa11.18□□□□□ -0.62
HNRNPU-207ENST00000468690 CECR2Q9BXF3 1484 aa11.18□□□□□ -0.62
HNRNPU-207ENST00000468690 SMARCA2P51531 1590 aa11.17□□□□□ -0.62
HNRNPU-207ENST00000468690 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
HNRNPU-207ENST00000468690 GOLGA3Q08378 1498 aa11.16□□□□□ -0.62
HNRNPU-207ENST00000468690 NEFLP07196 543 aa11.14□□□□□ -0.63
HNRNPU-207ENST00000468690 MROH2BQ7Z745 1585 aa11.13□□□□□ -0.63
HNRNPU-207ENST00000468690 FAM50AQ14320 339 aaKnown RBP11.13□□□□□ -0.63
HNRNPU-207ENST00000468690 TOP2AP11388 1531 aaKnown RBP11.12□□□□□ -0.63
HNRNPU-207ENST00000468690 CEP164Q9UPV0 1460 aa11.1□□□□□ -0.63
HNRNPU-207ENST00000468690 TNIKQ9UKE5 1360 aa11.1□□□□□ -0.63
HNRNPU-207ENST00000468690 CDK11AQ9UQ88 783 aaPredicted RBP11.08□□□□□ -0.63
HNRNPU-207ENST00000468690 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
HNRNPU-207ENST00000468690 CLIP1P30622 1438 aa11.07□□□□□ -0.64
HNRNPU-207ENST00000468690 DIEXFQ68CQ4 756 aaKnown RBP11.05□□□□□ -0.64
HNRNPU-207ENST00000468690 CCDC88BA6NC98 1476 aa11.05□□□□□ -0.64
HNRNPU-207ENST00000468690 ACIN1Q9UKV3 1341 aaKnown RBP11.03□□□□□ -0.64
HNRNPU-207ENST00000468690 CEP162Q5TB80 1403 aa11.03□□□□□ -0.64
HNRNPU-207ENST00000468690 SMARCA4P51532 1647 aa11.03□□□□□ -0.64
HNRNPU-207ENST00000468690 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
HNRNPU-207ENST00000468690 YTHDC1Q96MU7 727 aaKnown RBP11□□□□□ -0.65
HNRNPU-207ENST00000468690 TRIM52Q96A61 297 aa11□□□□□ -0.65
HNRNPU-207ENST00000468690 WIZO95785 1651 aa10.99□□□□□ -0.65
HNRNPU-207ENST00000468690 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
HNRNPU-207ENST00000468690 FBLN2P98095 1184 aa10.96□□□□□ -0.65
HNRNPU-207ENST00000468690 P3H3Q8IVL6 736 aa10.94□□□□□ -0.66
HNRNPU-207ENST00000468690 ATAD2BQ9ULI0 1458 aa10.93□□□□□ -0.66
HNRNPU-207ENST00000468690 ERICH6Q7L0X2 663 aa10.9□□□□□ -0.66
HNRNPU-207ENST00000468690 NEUROD1Q13562 356 aa10.89□□□□□ -0.67
HNRNPU-207ENST00000468690 FHAD1B1AJZ9 1412 aa10.88□□□□□ -0.67
HNRNPU-207ENST00000468690 MTUS2Q5JR59 1369 aa10.88□□□□□ -0.67
HNRNPU-207ENST00000468690 MYT1Q01538 1121 aa10.87□□□□□ -0.67
HNRNPU-207ENST00000468690 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
HNRNPU-207ENST00000468690 ANP32CO43423 234 aa10.86□□□□□ -0.67
HNRNPU-207ENST00000468690 SOGA1O94964 1423 aa10.85□□□□□ -0.67
HNRNPU-207ENST00000468690 CHMP7Q8WUX9 453 aaPredicted RBP10.84□□□□□ -0.67
HNRNPU-207ENST00000468690 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
HNRNPU-207ENST00000468690 CARMIL1Q5VZK9 1371 aa10.83□□□□□ -0.68
HNRNPU-207ENST00000468690 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
HNRNPU-207ENST00000468690 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.68
HNRNPU-207ENST00000468690 CUX2O14529 1486 aa10.83□□□□□ -0.68
HNRNPU-207ENST00000468690 CLSPNQ9HAW4 1339 aa10.83□□□□□ -0.68
HNRNPU-207ENST00000468690 TONSLQ96HA7 1378 aa10.82□□□□□ -0.68
HNRNPU-207ENST00000468690 VPS8Q8N3P4 1428 aa10.81□□□□□ -0.68
HNRNPU-207ENST00000468690 NCAPD3P42695 1498 aa10.79□□□□□ -0.68
HNRNPU-207ENST00000468690 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
HNRNPU-207ENST00000468690 ZNF777Q9ULD5 760 aaPredicted RBP10.76□□□□□ -0.69
HNRNPU-207ENST00000468690 NPM1P06748 294 aaKnown RBP eCLIP10.75□□□□□ -0.69
HNRNPU-207ENST00000468690 TSPY4P0CV99 314 aa10.74□□□□□ -0.69
HNRNPU-207ENST00000468690 TSPY10P0CW01 314 aa10.74□□□□□ -0.69
HNRNPU-207ENST00000468690 RAPGEF2Q9Y4G8 1499 aa10.72□□□□□ -0.69
HNRNPU-207ENST00000468690 PLEKHD1A6NEE1 506 aa10.72□□□□□ -0.69
HNRNPU-207ENST00000468690 ARID3CA6NKF2 412 aa10.71□□□□□ -0.69
HNRNPU-207ENST00000468690 FMN1Q68DA7 1419 aa10.71□□□□□ -0.69
HNRNPU-207ENST00000468690 HMGXB3Q12766 1538 aa10.7□□□□□ -0.7
HNRNPU-207ENST00000468690 CCNB3Q8WWL7 1395 aa10.7□□□□□ -0.7
HNRNPU-207ENST00000468690 TIMELESSQ9UNS1 1208 aa10.7□□□□□ -0.7
HNRNPU-207ENST00000468690 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
HNRNPU-207ENST00000468690 ZNF326Q5BKZ1 582 aaKnown RBP10.68□□□□□ -0.7
HNRNPU-207ENST00000468690 FANCD2Q9BXW9 1451 aa10.66□□□□□ -0.7
HNRNPU-207ENST00000468690 ARHGAP35Q9NRY4 1499 aa10.65□□□□□ -0.7
HNRNPU-207ENST00000468690 CARMIL2Q6F5E8 1435 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms