RNA–Protein interactions for RNA: ENST00000275227.8

SLC18B1-201, Transcript of solute carrier family 18 member B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC18B1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC18B1-201ENST00000275227 NISCHQ9Y2I1 1504 aa37.23■■■■□ 3.55
SLC18B1-201ENST00000275227 CCDC180Q9P1Z9 1646 aa32.02■■■□□ 2.72
SLC18B1-201ENST00000275227 ZCCHC6Q5VYS8 1495 aaKnown RBP31.41■■■□□ 2.62
SLC18B1-201ENST00000275227 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
SLC18B1-201ENST00000275227 DCAF8L2P0C7V8 631 aa30.72■■■□□ 2.51
SLC18B1-201ENST00000275227 DCAF1Q9Y4B6 1507 aa30.65■■■□□ 2.5
SLC18B1-201ENST00000275227 SUPT5HO00267 1087 aaKnown RBP30.17■■■□□ 2.42
SLC18B1-201ENST00000275227 MYO15BQ96JP2 1530 aa30■■■□□ 2.39
SLC18B1-201ENST00000275227 ABCC9O60706 1549 aa29.97■■■□□ 2.39
SLC18B1-201ENST00000275227 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
SLC18B1-201ENST00000275227 NACADO15069 1562 aa29.69■■■□□ 2.34
SLC18B1-201ENST00000275227 RB1CC1Q8TDY2 1594 aa29.31■■■□□ 2.28
SLC18B1-201ENST00000275227 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.26
SLC18B1-201ENST00000275227 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
SLC18B1-201ENST00000275227 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
SLC18B1-201ENST00000275227 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.21
SLC18B1-201ENST00000275227 UNC13AQ9UPW8 1703 aa28.88■■■□□ 2.21
SLC18B1-201ENST00000275227 WIZO95785 1651 aa28.69■■■□□ 2.18
SLC18B1-201ENST00000275227 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
SLC18B1-201ENST00000275227 BICRAQ9NZM4 1560 aa28.57■■■□□ 2.16
SLC18B1-201ENST00000275227 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
SLC18B1-201ENST00000275227 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
SLC18B1-201ENST00000275227 TOP2AP11388 1531 aaKnown RBP28.29■■■□□ 2.12
SLC18B1-201ENST00000275227 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
SLC18B1-201ENST00000275227 LOC105371045A0A1W2PR82 267 aa28.18■■■□□ 2.1
SLC18B1-201ENST00000275227 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
SLC18B1-201ENST00000275227 SMARCA2P51531 1590 aa28.1■■■□□ 2.09
SLC18B1-201ENST00000275227 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
SLC18B1-201ENST00000275227 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
SLC18B1-201ENST00000275227 ATAD2BQ9ULI0 1458 aa27.88■■■□□ 2.05
SLC18B1-201ENST00000275227 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
SLC18B1-201ENST00000275227 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
SLC18B1-201ENST00000275227 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
SLC18B1-201ENST00000275227 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
SLC18B1-201ENST00000275227 PCGF6Q9BYE7 350 aa27.52■■■□□ 2
SLC18B1-201ENST00000275227 NCAPD3P42695 1498 aa27.46■■□□□ 1.99
SLC18B1-201ENST00000275227 HMGXB3Q12766 1538 aa27.45■■□□□ 1.98
SLC18B1-201ENST00000275227 WRNQ14191 1432 aaPredicted RBP eCLIP27.42■■□□□ 1.98
SLC18B1-201ENST00000275227 SOGA1O94964 1423 aa27.41■■□□□ 1.98
SLC18B1-201ENST00000275227 SYNJ1O43426 1573 aa27.35■■□□□ 1.97
SLC18B1-201ENST00000275227 RUSC2Q8N2Y8 1516 aa27.31■■□□□ 1.96
SLC18B1-201ENST00000275227 HRCP23327 699 aa27.25■■□□□ 1.95
SLC18B1-201ENST00000275227 EEA1Q15075 1411 aa27.23■■□□□ 1.95
SLC18B1-201ENST00000275227 TRIM26Q12899 539 aaPredicted RBP27.21■■□□□ 1.95
SLC18B1-201ENST00000275227 CSRNP3Q8WYN3 585 aa27.16■■□□□ 1.94
SLC18B1-201ENST00000275227 TOP2BQ02880 1626 aa27.09■■□□□ 1.93
SLC18B1-201ENST00000275227 CFTRP13569 1480 aa27.07■■□□□ 1.92
SLC18B1-201ENST00000275227 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
SLC18B1-201ENST00000275227 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
SLC18B1-201ENST00000275227 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
SLC18B1-201ENST00000275227 CEP162Q5TB80 1403 aa27.01■■□□□ 1.91
SLC18B1-201ENST00000275227 GOLGA3Q08378 1498 aa26.98■■□□□ 1.91
SLC18B1-201ENST00000275227 CUX1P39880 1505 aa26.95■■□□□ 1.9
SLC18B1-201ENST00000275227 KIF21BO75037 1637 aa26.92■■□□□ 1.9
SLC18B1-201ENST00000275227 UBTFP17480 764 aaKnown RBP26.91■■□□□ 1.9
SLC18B1-201ENST00000275227 CEP164Q9UPV0 1460 aa26.9■■□□□ 1.9
SLC18B1-201ENST00000275227 PPARGC1BQ86YN6 1023 aaKnown RBP26.88■■□□□ 1.89
SLC18B1-201ENST00000275227 PRDM2Q13029 1718 aa26.87■■□□□ 1.89
SLC18B1-201ENST00000275227 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
SLC18B1-201ENST00000275227 RAPGEF2Q9Y4G8 1499 aa26.79■■□□□ 1.88
SLC18B1-201ENST00000275227 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
SLC18B1-201ENST00000275227 CLIP1P30622 1438 aa26.62■■□□□ 1.85
SLC18B1-201ENST00000275227 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
SLC18B1-201ENST00000275227 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
SLC18B1-201ENST00000275227 FANCD2Q9BXW9 1451 aa26.58■■□□□ 1.85
SLC18B1-201ENST00000275227 NESP48681 1621 aa26.56■■□□□ 1.84
SLC18B1-201ENST00000275227 TTBK1Q5TCY1 1321 aaPredicted RBP26.54■■□□□ 1.84
SLC18B1-201ENST00000275227 FGD5Q6ZNL6 1462 aa26.53■■□□□ 1.84
SLC18B1-201ENST00000275227 CUX2O14529 1486 aa26.48■■□□□ 1.83
SLC18B1-201ENST00000275227 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
SLC18B1-201ENST00000275227 VPS8Q8N3P4 1428 aa26.46■■□□□ 1.83
SLC18B1-201ENST00000275227 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.82
SLC18B1-201ENST00000275227 DNMBPQ6XZF7 1577 aa26.4■■□□□ 1.82
SLC18B1-201ENST00000275227 IGF1RP08069 1367 aa26.4■■□□□ 1.82
SLC18B1-201ENST00000275227 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
SLC18B1-201ENST00000275227 TOPBP1Q92547 1522 aa26.37■■□□□ 1.81
SLC18B1-201ENST00000275227 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
SLC18B1-201ENST00000275227 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
SLC18B1-201ENST00000275227 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
SLC18B1-201ENST00000275227 RAD54L2Q9Y4B4 1467 aa26.31■■□□□ 1.8
SLC18B1-201ENST00000275227 URB2Q14146 1524 aaKnown RBP26.26■■□□□ 1.79
SLC18B1-201ENST00000275227 ABCA10Q8WWZ4 1543 aa26.25■■□□□ 1.79
SLC18B1-201ENST00000275227 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
SLC18B1-201ENST00000275227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
SLC18B1-201ENST00000275227 ARHGAP35Q9NRY4 1499 aa26.19■■□□□ 1.78
SLC18B1-201ENST00000275227 PDS5BQ9NTI5 1447 aa26.17■■□□□ 1.78
SLC18B1-201ENST00000275227 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
SLC18B1-201ENST00000275227 APLP2Q06481 763 aa26.14■■□□□ 1.77
SLC18B1-201ENST00000275227 WDR97A6NE52 1622 aa26.11■■□□□ 1.77
SLC18B1-201ENST00000275227 CCER1Q8TC90 406 aaPredicted RBP26.07■■□□□ 1.76
SLC18B1-201ENST00000275227 CUL7Q14999 1698 aa26.01■■□□□ 1.75
SLC18B1-201ENST00000275227 KANK4Q5T7N3 995 aaPredicted RBP26.01■■□□□ 1.75
SLC18B1-201ENST00000275227 ABCA5Q8WWZ7 1642 aa26■■□□□ 1.75
SLC18B1-201ENST00000275227 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
SLC18B1-201ENST00000275227 HNRNPUL2Q1KMD3 747 aaKnown RBP25.95■■□□□ 1.74
SLC18B1-201ENST00000275227 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
SLC18B1-201ENST00000275227 GAPVD1Q14C86 1478 aa25.92■■□□□ 1.74
SLC18B1-201ENST00000275227 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
SLC18B1-201ENST00000275227 MRC2Q9UBG0 1479 aa25.84■■□□□ 1.73
SLC18B1-201ENST00000275227 P3H3Q8IVL6 736 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms