RNA–Protein interactions for RNA: ENST00000366525.8

HNRNPU-202, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,851 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-202ENST00000366525 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
HNRNPU-202ENST00000366525 HRCP23327 699 aa16.69■□□□□ 0.26
HNRNPU-202ENST00000366525 PPARGC1BQ86YN6 1023 aaKnown RBP16.39■□□□□ 0.21
HNRNPU-202ENST00000366525 PCGF6Q9BYE7 350 aa16.31■□□□□ 0.2
HNRNPU-202ENST00000366525 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
HNRNPU-202ENST00000366525 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.2
HNRNPU-202ENST00000366525 MYO15BQ96JP2 1530 aa16.21■□□□□ 0.19
HNRNPU-202ENST00000366525 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
HNRNPU-202ENST00000366525 CHIC1Q5VXU3 224 aa16.04■□□□□ 0.16
HNRNPU-202ENST00000366525 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
HNRNPU-202ENST00000366525 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
HNRNPU-202ENST00000366525 TRIM26Q12899 539 aaPredicted RBP15.72■□□□□ 0.11
HNRNPU-202ENST00000366525 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.11
HNRNPU-202ENST00000366525 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
HNRNPU-202ENST00000366525 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
HNRNPU-202ENST00000366525 MYT1Q01538 1121 aa15.58■□□□□ 0.08
HNRNPU-202ENST00000366525 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
HNRNPU-202ENST00000366525 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
HNRNPU-202ENST00000366525 NEUROD1Q13562 356 aa15.4■□□□□ 0.06
HNRNPU-202ENST00000366525 GTF3C3Q9Y5Q9 886 aa15.32■□□□□ 0.04
HNRNPU-202ENST00000366525 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.02
HNRNPU-202ENST00000366525 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
HNRNPU-202ENST00000366525 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
HNRNPU-202ENST00000366525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0.01
HNRNPU-202ENST00000366525 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
HNRNPU-202ENST00000366525 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
HNRNPU-202ENST00000366525 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
HNRNPU-202ENST00000366525 TRIM41Q8WV44 630 aa15□□□□□ -0.01
HNRNPU-202ENST00000366525 YTHDC1Q96MU7 727 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-202ENST00000366525 ABCC9O60706 1549 aa14.79□□□□□ -0.04
HNRNPU-202ENST00000366525 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
HNRNPU-202ENST00000366525 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
HNRNPU-202ENST00000366525 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
HNRNPU-202ENST00000366525 MIER1Q8N108 512 aa14.72□□□□□ -0.05
HNRNPU-202ENST00000366525 TTBK1Q5TCY1 1321 aaPredicted RBP14.7□□□□□ -0.06
HNRNPU-202ENST00000366525 BCL11AQ9H165 835 aa14.65□□□□□ -0.06
HNRNPU-202ENST00000366525 ANP32EQ9BTT0 268 aa14.59□□□□□ -0.07
HNRNPU-202ENST00000366525 SUPT16HQ9Y5B9 1047 aaKnown RBP14.55□□□□□ -0.08
HNRNPU-202ENST00000366525 TSHZ2Q9NRE2 1034 aa14.52□□□□□ -0.08
HNRNPU-202ENST00000366525 WRNQ14191 1432 aaPredicted RBP eCLIP14.5□□□□□ -0.09
HNRNPU-202ENST00000366525 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
HNRNPU-202ENST00000366525 SCRIBQ14160 1630 aa14.45□□□□□ -0.1
HNRNPU-202ENST00000366525 CLSPNQ9HAW4 1339 aa14.45□□□□□ -0.1
HNRNPU-202ENST00000366525 CEP162Q5TB80 1403 aa14.42□□□□□ -0.1
HNRNPU-202ENST00000366525 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
HNRNPU-202ENST00000366525 CECR2Q9BXF3 1484 aa14.3□□□□□ -0.12
HNRNPU-202ENST00000366525 TNIKQ9UKE5 1360 aa14.29□□□□□ -0.12
HNRNPU-202ENST00000366525 MROH2BQ7Z745 1585 aa14.28□□□□□ -0.12
HNRNPU-202ENST00000366525 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
HNRNPU-202ENST00000366525 WIZO95785 1651 aa14.26□□□□□ -0.13
HNRNPU-202ENST00000366525 BCANQ96GW7 911 aa14.25□□□□□ -0.13
HNRNPU-202ENST00000366525 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
HNRNPU-202ENST00000366525 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
HNRNPU-202ENST00000366525 UBTFP17480 764 aaKnown RBP14.24□□□□□ -0.13
HNRNPU-202ENST00000366525 SOGA1O94964 1423 aa14.22□□□□□ -0.13
HNRNPU-202ENST00000366525 RBM19Q9Y4C8 960 aaKnown RBP14.16□□□□□ -0.14
HNRNPU-202ENST00000366525 KCNH8Q96L42 1107 aa14.15□□□□□ -0.14
HNRNPU-202ENST00000366525 FKBP8Q14318 412 aa14.14□□□□□ -0.15
HNRNPU-202ENST00000366525 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
HNRNPU-202ENST00000366525 BAZ1AQ9NRL2 1556 aaPredicted RBP14.12□□□□□ -0.15
HNRNPU-202ENST00000366525 PRKCSHP14314 528 aaPredicted RBP14.1□□□□□ -0.15
HNRNPU-202ENST00000366525 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
HNRNPU-202ENST00000366525 DHX57Q6P158 1386 aaKnown RBP14.08□□□□□ -0.16
HNRNPU-202ENST00000366525 MSH5O43196 834 aa14.07□□□□□ -0.16
HNRNPU-202ENST00000366525 EEA1Q15075 1411 aa14.07□□□□□ -0.16
HNRNPU-202ENST00000366525 ITGAEP38570 1179 aa14.04□□□□□ -0.16
HNRNPU-202ENST00000366525 NACADO15069 1562 aa14.03□□□□□ -0.16
HNRNPU-202ENST00000366525 APLP2Q06481 763 aa14.01□□□□□ -0.17
HNRNPU-202ENST00000366525 CLIP1P30622 1438 aa14.01□□□□□ -0.17
HNRNPU-202ENST00000366525 VPS8Q8N3P4 1428 aa14□□□□□ -0.17
HNRNPU-202ENST00000366525 NEFLP07196 543 aa13.99□□□□□ -0.17
HNRNPU-202ENST00000366525 TOP2AP11388 1531 aaKnown RBP13.93□□□□□ -0.18
HNRNPU-202ENST00000366525 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
HNRNPU-202ENST00000366525 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
HNRNPU-202ENST00000366525 RANGAP1P46060 587 aaPredicted RBP13.92□□□□□ -0.18
HNRNPU-202ENST00000366525 ERICH6Q7L0X2 663 aa13.91□□□□□ -0.18
HNRNPU-202ENST00000366525 TRIM52Q96A61 297 aa13.89□□□□□ -0.19
HNRNPU-202ENST00000366525 FANCIQ9NVI1 1328 aa13.89□□□□□ -0.19
HNRNPU-202ENST00000366525 DDX10Q13206 875 aaKnown RBP13.89□□□□□ -0.19
HNRNPU-202ENST00000366525 KIF21BO75037 1637 aa13.89□□□□□ -0.19
HNRNPU-202ENST00000366525 DEKP35659 375 aaKnown RBP13.83□□□□□ -0.2
HNRNPU-202ENST00000366525 RAPGEF2Q9Y4G8 1499 aa13.81□□□□□ -0.2
HNRNPU-202ENST00000366525 KANK4Q5T7N3 995 aaPredicted RBP13.81□□□□□ -0.2
HNRNPU-202ENST00000366525 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
HNRNPU-202ENST00000366525 CDK11AQ9UQ88 783 aaPredicted RBP13.8□□□□□ -0.2
HNRNPU-202ENST00000366525 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
HNRNPU-202ENST00000366525 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.2
HNRNPU-202ENST00000366525 IRX6P78412 446 aaPredicted RBP13.77□□□□□ -0.21
HNRNPU-202ENST00000366525 CUX2O14529 1486 aa13.76□□□□□ -0.21
HNRNPU-202ENST00000366525 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
HNRNPU-202ENST00000366525 RRBP1Q9P2E9 1410 aaKnown RBP13.75□□□□□ -0.21
HNRNPU-202ENST00000366525 CCER2I3L3R5 266 aa13.75□□□□□ -0.21
HNRNPU-202ENST00000366525 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
HNRNPU-202ENST00000366525 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
HNRNPU-202ENST00000366525 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
HNRNPU-202ENST00000366525 MAPKBP1O60336 1514 aa13.74□□□□□ -0.21
HNRNPU-202ENST00000366525 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
HNRNPU-202ENST00000366525 ANP32CO43423 234 aa13.73□□□□□ -0.21
HNRNPU-202ENST00000366525 RAB3GAP2Q9H2M9 1393 aa13.7□□□□□ -0.22
HNRNPU-202ENST00000366525 ARAP1Q96P48 1450 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms