Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.43■□□□□ 0.7
SPCS1Q9Y6A9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPCS1Q9Y6A9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SPCS1Q9Y6A9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPCS1Q9Y6A9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPCS1Q9Y6A9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPCS1Q9Y6A9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.43■□□□□ 0.7
SPCS1Q9Y6A9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPCS1Q9Y6A9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SPCS1Q9Y6A9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPCS1Q9Y6A9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPCS1Q9Y6A9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.42■□□□□ 0.7
SPCS1Q9Y6A9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SPCS1Q9Y6A9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SPCS1Q9Y6A9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPCS1Q9Y6A9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPCS1Q9Y6A9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SPCS1Q9Y6A9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPCS1Q9Y6A9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.39■□□□□ 0.69
SPCS1Q9Y6A9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS1Q9Y6A9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS1Q9Y6A9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPCS1Q9Y6A9 ABCB10P1-201ENST00000614297 2181 ntBASIC19.34■□□□□ 0.69
SPCS1Q9Y6A9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS1Q9Y6A9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS1Q9Y6A9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPCS1Q9Y6A9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SPCS1Q9Y6A9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPCS1Q9Y6A9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS1Q9Y6A9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPCS1Q9Y6A9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPCS1Q9Y6A9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPCS1Q9Y6A9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.29■□□□□ 0.68
SPCS1Q9Y6A9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPCS1Q9Y6A9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPCS1Q9Y6A9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SPCS1Q9Y6A9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPCS1Q9Y6A9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPCS1Q9Y6A9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPCS1Q9Y6A9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPCS1Q9Y6A9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPCS1Q9Y6A9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPCS1Q9Y6A9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.25■□□□□ 0.67
SPCS1Q9Y6A9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPCS1Q9Y6A9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPCS1Q9Y6A9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.22■□□□□ 0.67
SPCS1Q9Y6A9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.2■□□□□ 0.66
SPCS1Q9Y6A9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPCS1Q9Y6A9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPCS1Q9Y6A9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.19■□□□□ 0.66
SPCS1Q9Y6A9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPCS1Q9Y6A9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPCS1Q9Y6A9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SPCS1Q9Y6A9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPCS1Q9Y6A9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPCS1Q9Y6A9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SPCS1Q9Y6A9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPCS1Q9Y6A9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPCS1Q9Y6A9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPCS1Q9Y6A9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPCS1Q9Y6A9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPCS1Q9Y6A9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPCS1Q9Y6A9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPCS1Q9Y6A9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPCS1Q9Y6A9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS1Q9Y6A9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS1Q9Y6A9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS1Q9Y6A9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPCS1Q9Y6A9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPCS1Q9Y6A9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPCS1Q9Y6A9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS1Q9Y6A9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
SPCS1Q9Y6A9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS1Q9Y6A9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS1Q9Y6A9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SPCS1Q9Y6A9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS1Q9Y6A9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SPCS1Q9Y6A9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS1Q9Y6A9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.04■□□□□ 0.64
SPCS1Q9Y6A9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS1Q9Y6A9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SPCS1Q9Y6A9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS1Q9Y6A9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS1Q9Y6A9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS1Q9Y6A9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPCS1Q9Y6A9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPCS1Q9Y6A9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPCS1Q9Y6A9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPCS1Q9Y6A9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS1Q9Y6A9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS1Q9Y6A9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPCS1Q9Y6A9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS1Q9Y6A9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SPCS1Q9Y6A9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.95■□□□□ 0.62
SPCS1Q9Y6A9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPCS1Q9Y6A9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPCS1Q9Y6A9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPCS1Q9Y6A9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SPCS1Q9Y6A9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPCS1Q9Y6A9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms