RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 DCAF8L2P0C7V8 631 aa35.97■■■■□ 3.35
HOMER1-202ENST00000334082 PELP1Q8IZL8 1130 aaKnown RBP35.88■■■■□ 3.33
HOMER1-202ENST00000334082 SUPT5HO00267 1087 aaKnown RBP34.76■■■■□ 3.16
HOMER1-202ENST00000334082 ERICH6Q7L0X2 663 aa34.56■■■■□ 3.12
HOMER1-202ENST00000334082 MYT1Q01538 1121 aa34.32■■■■□ 3.09
HOMER1-202ENST00000334082 EHMT2Q96KQ7 1210 aa34.22■■■■□ 3.07
HOMER1-202ENST00000334082 CCER1Q8TC90 406 aaPredicted RBP34.19■■■■□ 3.06
HOMER1-202ENST00000334082 CENPBP07199 599 aaPredicted RBP34.04■■■■□ 3.04
HOMER1-202ENST00000334082 APLP2Q06481 763 aa33.79■■■■□ 3
HOMER1-202ENST00000334082 PCGF6Q9BYE7 350 aa33.58■■■□□ 2.97
HOMER1-202ENST00000334082 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
HOMER1-202ENST00000334082 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.95
HOMER1-202ENST00000334082 ZEB1P37275 1124 aaPredicted RBP33.36■■■□□ 2.93
HOMER1-202ENST00000334082 NEFLP07196 543 aa33.29■■■□□ 2.92
HOMER1-202ENST00000334082 TTBK1Q5TCY1 1321 aaPredicted RBP33.28■■■□□ 2.92
HOMER1-202ENST00000334082 YTHDC1Q96MU7 727 aaKnown RBP33.06■■■□□ 2.88
HOMER1-202ENST00000334082 FAM9AQ8IZU1 332 aaPredicted RBP32.99■■■□□ 2.87
HOMER1-202ENST00000334082 DAXXQ9UER7 740 aaPredicted RBP32.64■■■□□ 2.82
HOMER1-202ENST00000334082 RANGAP1P46060 587 aaPredicted RBP32.42■■■□□ 2.78
HOMER1-202ENST00000334082 ATP1B4Q9UN42 357 aaPredicted RBP32.21■■■□□ 2.75
HOMER1-202ENST00000334082 RTL5Q5HYW3 569 aaPredicted RBP32.11■■■□□ 2.73
HOMER1-202ENST00000334082 TRIM41Q8WV44 630 aa32.05■■■□□ 2.72
HOMER1-202ENST00000334082 HRCP23327 699 aa31.93■■■□□ 2.7
HOMER1-202ENST00000334082 UBTFP17480 764 aaKnown RBP31.9■■■□□ 2.7
HOMER1-202ENST00000334082 ZNF316A6NFI3 1004 aaPredicted RBP31.85■■■□□ 2.69
HOMER1-202ENST00000334082 TRIM26Q12899 539 aaPredicted RBP31.77■■■□□ 2.68
HOMER1-202ENST00000334082 PPARGC1BQ86YN6 1023 aaKnown RBP31.71■■■□□ 2.67
HOMER1-202ENST00000334082 POLR3GLQ9BT43 218 aa31.64■■■□□ 2.66
HOMER1-202ENST00000334082 CLSPNQ9HAW4 1339 aa31.5■■■□□ 2.63
HOMER1-202ENST00000334082 CNGB1Q14028 1251 aaPredicted RBP31.37■■■□□ 2.61
HOMER1-202ENST00000334082 ITGAEP38570 1179 aa31.25■■■□□ 2.59
HOMER1-202ENST00000334082 DIEXFQ68CQ4 756 aaKnown RBP31.24■■■□□ 2.59
HOMER1-202ENST00000334082 BCANQ96GW7 911 aa31.12■■■□□ 2.57
HOMER1-202ENST00000334082 GTF3C3Q9Y5Q9 886 aa31.11■■■□□ 2.57
HOMER1-202ENST00000334082 HNRNPUL2Q1KMD3 747 aaKnown RBP31.06■■■□□ 2.56
HOMER1-202ENST00000334082 CDK11AQ9UQ88 783 aaPredicted RBP31.04■■■□□ 2.56
HOMER1-202ENST00000334082 EIF5BO60841 1220 aaKnown RBP30.92■■■□□ 2.54
HOMER1-202ENST00000334082 SLC4A1APQ9BWU0 796 aaKnown RBP30.91■■■□□ 2.54
HOMER1-202ENST00000334082 MYT1LQ9UL68 1186 aa30.91■■■□□ 2.54
HOMER1-202ENST00000334082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.81■■■□□ 2.52
HOMER1-202ENST00000334082 GLIPR1L2Q4G1C9 344 aa30.73■■■□□ 2.51
HOMER1-202ENST00000334082 LOC105371045A0A1W2PR82 267 aa30.68■■■□□ 2.5
HOMER1-202ENST00000334082 ZBTB47Q9UFB7 747 aaPredicted RBP30.64■■■□□ 2.5
HOMER1-202ENST00000334082 ANP32AP39687 249 aaKnown RBP30.63■■■□□ 2.49
HOMER1-202ENST00000334082 ANP32CO43423 234 aa30.52■■■□□ 2.48
HOMER1-202ENST00000334082 CHIC1Q5VXU3 224 aa30.5■■■□□ 2.47
HOMER1-202ENST00000334082 ACIN1Q9UKV3 1341 aaKnown RBP30.44■■■□□ 2.46
HOMER1-202ENST00000334082 ANP32BQ92688 251 aaKnown RBP30.43■■■□□ 2.46
HOMER1-202ENST00000334082 NPM2Q86SE8 214 aaKnown RBP30.39■■■□□ 2.46
HOMER1-202ENST00000334082 CANXP27824 592 aaKnown RBP30.36■■■□□ 2.45
HOMER1-202ENST00000334082 NEUROD1Q13562 356 aa30.33■■■□□ 2.45
HOMER1-202ENST00000334082 BCL11AQ9H165 835 aa30.31■■■□□ 2.44
HOMER1-202ENST00000334082 FAM50AQ14320 339 aaKnown RBP30.23■■■□□ 2.43
HOMER1-202ENST00000334082 TRIM52Q96A61 297 aa30.22■■■□□ 2.43
HOMER1-202ENST00000334082 ZNF326Q5BKZ1 582 aaKnown RBP30.04■■■□□ 2.4
HOMER1-202ENST00000334082 HSP90AA1P07900 732 aaKnown RBP30.03■■■□□ 2.4
HOMER1-202ENST00000334082 FKBP8Q14318 412 aa29.99■■■□□ 2.39
HOMER1-202ENST00000334082 NBR1Q14596 966 aa29.99■■■□□ 2.39
HOMER1-202ENST00000334082 SLC24A1O60721 1099 aa29.97■■■□□ 2.39
HOMER1-202ENST00000334082 UPF2Q9HAU5 1272 aaKnown RBP29.88■■■□□ 2.37
HOMER1-202ENST00000334082 NEFMP07197 916 aa29.87■■■□□ 2.37
HOMER1-202ENST00000334082 ARXQ96QS3 562 aa29.82■■■□□ 2.36
HOMER1-202ENST00000334082 TNNT2P45379 298 aaPredicted RBP29.57■■■□□ 2.32
HOMER1-202ENST00000334082 HNRNPUQ00839 825 aaKnown RBP eCLIP29.55■■■□□ 2.32
HOMER1-202ENST00000334082 CCDC136Q96JN2 1154 aa29.53■■■□□ 2.32
HOMER1-202ENST00000334082 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.3
HOMER1-202ENST00000334082 TRIM44Q96DX7 344 aaPredicted RBP29.44■■■□□ 2.3
HOMER1-202ENST00000334082 FAM9BQ8IZU0 186 aa29.39■■■□□ 2.3
HOMER1-202ENST00000334082 SCAF1Q9H7N4 1312 aaKnown RBP29.36■■■□□ 2.29
HOMER1-202ENST00000334082 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.36■■■□□ 2.29
HOMER1-202ENST00000334082 ABCC9O60706 1549 aa29.32■■■□□ 2.28
HOMER1-202ENST00000334082 ANP32EQ9BTT0 268 aa29.3■■■□□ 2.28
HOMER1-202ENST00000334082 CDK11BP21127 795 aaKnown RBP29.29■■■□□ 2.28
HOMER1-202ENST00000334082 SALL2Q9Y467 1007 aaPredicted RBP29.26■■■□□ 2.28
HOMER1-202ENST00000334082 DDRGK1Q96HY6 314 aa29.25■■■□□ 2.27
HOMER1-202ENST00000334082 DDX10Q13206 875 aaKnown RBP29.22■■■□□ 2.27
HOMER1-202ENST00000334082 BECN1Q14457 450 aa29.18■■■□□ 2.26
HOMER1-202ENST00000334082 NAP1L5Q96NT1 182 aaPredicted RBP29.17■■■□□ 2.26
HOMER1-202ENST00000334082 ERICH6BQ5W0A0 696 aa29.17■■■□□ 2.26
HOMER1-202ENST00000334082 NCLP19338 710 aaKnown RBP29.15■■■□□ 2.26
HOMER1-202ENST00000334082 IRX6P78412 446 aaPredicted RBP29.15■■■□□ 2.26
HOMER1-202ENST00000334082 TONSLQ96HA7 1378 aa29.11■■■□□ 2.25
HOMER1-202ENST00000334082 RTN4Q9NQC3 1192 aaKnown RBP29.11■■■□□ 2.25
HOMER1-202ENST00000334082 PTMAP06454 111 aaKnown RBP29.1■■■□□ 2.25
HOMER1-202ENST00000334082 GOLGA6L22H0YM25 854 aa29.1■■■□□ 2.25
HOMER1-202ENST00000334082 DNTTIP2Q5QJE6 756 aaKnown RBP29.09■■■□□ 2.25
HOMER1-202ENST00000334082 TMC1Q8TDI8 760 aa29.07■■■□□ 2.24
HOMER1-202ENST00000334082 FBLN2P98095 1184 aa29.06■■■□□ 2.24
HOMER1-202ENST00000334082 WDR43Q15061 677 aaKnown RBP eCLIP28.96■■■□□ 2.23
HOMER1-202ENST00000334082 MYH16Q9H6N6 1097 aa28.96■■■□□ 2.23
HOMER1-202ENST00000334082 PPM1GO15355 546 aaPredicted RBP28.96■■■□□ 2.23
HOMER1-202ENST00000334082 MRS2Q9HD23 443 aa28.96■■■□□ 2.23
HOMER1-202ENST00000334082 MIER1Q8N108 512 aa28.87■■■□□ 2.21
HOMER1-202ENST00000334082 ZNF777Q9ULD5 760 aaPredicted RBP28.85■■■□□ 2.21
HOMER1-202ENST00000334082 ZRSR1Q15695 479 aaKnown RBP28.83■■■□□ 2.21
HOMER1-202ENST00000334082 ARID3CA6NKF2 412 aa28.81■■■□□ 2.2
HOMER1-202ENST00000334082 P3H3Q8IVL6 736 aa28.81■■■□□ 2.2
HOMER1-202ENST00000334082 LAS1LQ9Y4W2 734 aaKnown RBP28.78■■■□□ 2.2
HOMER1-202ENST00000334082 AMER1Q5JTC6 1135 aaPredicted RBP28.78■■■□□ 2.2
HOMER1-202ENST00000334082 NOP58Q9Y2X3 529 aaKnown RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms