Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.91■■□□□ 1.9
PCDHGA11Q9Y5H2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
PCDHGA11Q9Y5H2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHGA11Q9Y5H2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
PCDHGA11Q9Y5H2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDHGA11Q9Y5H2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.91■■□□□ 1.9
PCDHGA11Q9Y5H2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDHGA11Q9Y5H2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGA11Q9Y5H2 AP002365.1-201ENST00000603448 772 ntBASIC26.87■■□□□ 1.89
PCDHGA11Q9Y5H2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHGA11Q9Y5H2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHGA11Q9Y5H2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHGA11Q9Y5H2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDHGA11Q9Y5H2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHGA11Q9Y5H2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.83■■□□□ 1.89
PCDHGA11Q9Y5H2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.82■■□□□ 1.88
PCDHGA11Q9Y5H2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHGA11Q9Y5H2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHGA11Q9Y5H2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.79■■□□□ 1.88
PCDHGA11Q9Y5H2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHGA11Q9Y5H2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHGA11Q9Y5H2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
PCDHGA11Q9Y5H2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHGA11Q9Y5H2 AL031258.1-201ENST00000623562 325 ntBASIC26.77■■□□□ 1.88
PCDHGA11Q9Y5H2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHGA11Q9Y5H2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGA11Q9Y5H2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGA11Q9Y5H2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHGA11Q9Y5H2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHGA11Q9Y5H2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.72■■□□□ 1.87
PCDHGA11Q9Y5H2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHGA11Q9Y5H2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.7■■□□□ 1.87
PCDHGA11Q9Y5H2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
PCDHGA11Q9Y5H2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGA11Q9Y5H2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
PCDHGA11Q9Y5H2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGA11Q9Y5H2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHGA11Q9Y5H2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHGA11Q9Y5H2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA11Q9Y5H2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.63■■□□□ 1.85
PCDHGA11Q9Y5H2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA11Q9Y5H2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
PCDHGA11Q9Y5H2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.63■■□□□ 1.85
PCDHGA11Q9Y5H2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA11Q9Y5H2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHGA11Q9Y5H2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.6■■□□□ 1.85
PCDHGA11Q9Y5H2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
PCDHGA11Q9Y5H2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDHGA11Q9Y5H2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGA11Q9Y5H2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGA11Q9Y5H2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.56■■□□□ 1.84
PCDHGA11Q9Y5H2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.56■■□□□ 1.84
PCDHGA11Q9Y5H2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGA11Q9Y5H2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHGA11Q9Y5H2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
PCDHGA11Q9Y5H2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGA11Q9Y5H2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGA11Q9Y5H2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGA11Q9Y5H2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA11Q9Y5H2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGA11Q9Y5H2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.53■■□□□ 1.84
PCDHGA11Q9Y5H2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGA11Q9Y5H2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGA11Q9Y5H2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGA11Q9Y5H2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHGA11Q9Y5H2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.52■■□□□ 1.84
PCDHGA11Q9Y5H2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA11Q9Y5H2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA11Q9Y5H2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.51■■□□□ 1.83
PCDHGA11Q9Y5H2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDHGA11Q9Y5H2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA11Q9Y5H2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.5■■□□□ 1.83
PCDHGA11Q9Y5H2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PCDHGA11Q9Y5H2 AC120057.4-201ENST00000624722 1615 ntBASIC26.5■■□□□ 1.83
PCDHGA11Q9Y5H2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA11Q9Y5H2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHGA11Q9Y5H2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PCDHGA11Q9Y5H2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHGA11Q9Y5H2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.47■■□□□ 1.83
PCDHGA11Q9Y5H2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
PCDHGA11Q9Y5H2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGA11Q9Y5H2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGA11Q9Y5H2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGA11Q9Y5H2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.4■■□□□ 1.82
PCDHGA11Q9Y5H2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.4■■□□□ 1.82
PCDHGA11Q9Y5H2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.4■■□□□ 1.82
PCDHGA11Q9Y5H2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGA11Q9Y5H2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGA11Q9Y5H2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGA11Q9Y5H2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PCDHGA11Q9Y5H2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHGA11Q9Y5H2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGA11Q9Y5H2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA11Q9Y5H2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGA11Q9Y5H2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA11Q9Y5H2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA11Q9Y5H2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDHGA11Q9Y5H2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDHGA11Q9Y5H2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDHGA11Q9Y5H2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms